Wall clock time and date at job start Mon Mar 30 2020 03:22:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52994 * 109.47323 * 2 1 4 4 C 1.50702 * 109.47122 * 119.99663 * 2 1 3 5 5 C 1.35276 * 126.63648 * 119.99666 * 4 2 1 6 6 C 1.42441 * 103.90831 * 180.02562 * 5 4 2 7 7 C 1.47768 * 126.96237 * 179.97438 * 6 5 4 8 8 O 1.20823 * 120.00012 * 359.97438 * 7 6 5 9 9 C 1.50702 * 119.99842 * 180.27749 * 7 6 5 10 10 C 1.50693 * 109.47154 * 179.72411 * 9 7 6 11 11 H 1.08007 * 120.00176 * 359.97438 * 10 9 7 12 12 C 1.37882 * 120.00468 * 179.97438 * 10 9 7 13 13 N 1.31514 * 119.99466 * 0.02562 * 12 10 9 14 14 Si 1.86796 * 120.00481 * 179.97438 * 12 10 9 15 15 H 1.48501 * 109.46949 * 60.00026 * 14 12 10 16 16 H 1.48499 * 109.47367 * 180.02562 * 14 12 10 17 17 H 1.48498 * 109.47219 * 300.00259 * 14 12 10 18 18 N 1.31163 * 106.07242 * 0.24259 * 6 5 4 19 19 O 1.20899 * 111.39988 * 359.57214 * 18 6 5 20 20 H 1.08999 * 109.46934 * 60.00018 * 1 2 3 21 21 H 1.08999 * 109.46837 * 179.97438 * 1 2 3 22 22 H 1.08997 * 109.47492 * 300.00115 * 1 2 3 23 23 H 1.08997 * 109.47492 * 239.99885 * 2 1 3 24 24 H 1.09001 * 109.47966 * 179.97438 * 3 2 1 25 25 H 1.09009 * 109.47103 * 299.99873 * 3 2 1 26 26 H 1.09007 * 109.47471 * 59.99657 * 3 2 1 27 27 H 1.07994 * 128.05030 * 359.97438 * 5 4 2 28 28 H 1.09004 * 109.46965 * 299.72270 * 9 7 6 29 29 H 1.09000 * 109.47629 * 59.71941 * 9 7 6 30 30 H 0.96999 * 120.00067 * 179.97438 * 13 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0323 -0.7103 1.2305 5 6 2.8131 -1.8146 1.2630 6 6 2.9911 -2.0673 2.6534 7 6 3.7672 -3.1663 3.2646 8 8 4.3340 -3.9691 2.5617 9 6 3.8461 -3.2896 4.7644 10 6 4.6855 -4.4876 5.1265 11 1 5.1182 -5.0989 4.3483 12 6 4.9011 -4.8035 6.4512 13 7 4.3738 -4.0595 7.3988 14 14 5.9410 -6.2889 6.9000 15 1 7.3078 -6.1225 6.3438 16 1 6.0189 -6.4105 8.3779 17 1 5.3226 -7.5151 6.3349 18 7 2.3217 -1.1303 3.2814 19 8 1.7916 -0.3708 2.5044 20 1 -0.3633 0.5138 -0.8900 21 1 -0.3633 -1.0277 -0.0005 22 1 -0.3634 0.5138 0.8899 23 1 1.8934 -0.5138 -0.8899 24 1 3.1300 1.4425 0.0005 25 1 1.6767 1.9563 -0.8901 26 1 1.6767 1.9564 0.8900 27 1 3.2087 -2.3748 0.4288 28 1 4.2994 -2.3895 5.1797 29 1 2.8427 -3.4123 5.1723 30 1 4.5251 -4.2819 8.3307 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259841299.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:22:39 Heat of formation + Delta-G solvation = 5.403424 kcal Electronic energy + Delta-G solvation = -14605.219106 eV Core-core repulsion = 11982.674072 eV Total energy + Delta-G solvation = -2622.545034 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 223.100 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -44.76378 -38.42425 -36.19835 -33.56850 -32.97650 -30.66768 -29.05283 -27.42357 -25.21127 -23.27514 -22.79864 -21.41953 -18.17306 -17.47012 -17.08904 -16.29709 -15.55866 -14.95848 -14.60044 -14.10202 -13.91491 -13.56933 -13.45110 -13.33076 -12.44873 -12.06323 -11.71794 -11.52239 -11.50552 -11.27082 -10.97225 -10.82541 -10.64179 -10.06814 -10.04541 -9.33612 -9.26776 -8.81722 -8.44274 -6.05789 -4.08328 1.44763 1.87418 3.13960 3.36025 3.38607 3.43270 3.56873 4.21903 4.35246 4.47505 4.67706 4.81488 4.97315 5.20861 5.31229 5.37034 5.45676 5.49148 5.56554 5.67300 5.73762 5.96919 6.01132 6.08348 6.53220 7.23166 7.33373 7.89146 8.13124 8.31929 8.54296 8.99851 9.56449 11.06009 Molecular weight = 223.10amu Principal moments of inertia in cm(-1) A = 0.070075 B = 0.005377 C = 0.005170 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 399.476013 B = 5206.575268 C = 5414.981744 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.009 4.009 3 C -0.151 4.151 4 C -0.045 4.045 5 C -0.192 4.192 6 C -0.049 4.049 7 C 0.433 3.567 8 O -0.445 6.445 9 C -0.012 4.012 10 C -0.523 4.523 11 H 0.073 0.927 12 C 0.058 3.942 13 N -0.896 5.896 14 Si 0.902 3.098 15 H -0.275 1.275 16 H -0.287 1.287 17 H -0.275 1.275 18 N -0.314 5.314 19 O 0.120 5.880 20 H 0.066 0.934 21 H 0.060 0.940 22 H 0.064 0.936 23 H 0.101 0.899 24 H 0.060 0.940 25 H 0.066 0.934 26 H 0.064 0.936 27 H 0.174 0.826 28 H 0.058 0.942 29 H 0.058 0.942 30 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.019 10.014 -14.491 18.961 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.028 4.028 3 C -0.208 4.208 4 C -0.108 4.108 5 C -0.214 4.214 6 C -0.206 4.206 7 C 0.307 3.693 8 O -0.315 6.315 9 C -0.049 4.049 10 C -0.561 4.561 11 H 0.091 0.909 12 C -0.143 4.143 13 N -0.535 5.535 14 Si 0.730 3.270 15 H -0.201 1.201 16 H -0.212 1.212 17 H -0.201 1.201 18 N -0.014 5.014 19 O 0.043 5.957 20 H 0.085 0.915 21 H 0.079 0.921 22 H 0.083 0.917 23 H 0.119 0.881 24 H 0.079 0.921 25 H 0.085 0.915 26 H 0.083 0.917 27 H 0.191 0.809 28 H 0.076 0.924 29 H 0.076 0.924 30 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -6.876 9.794 -13.340 17.921 hybrid contribution 0.731 -1.033 -0.323 1.306 sum -6.146 8.762 -13.663 17.356 Atomic orbital electron populations 1.21892 0.93276 1.02766 1.02863 1.19736 0.96610 0.96001 0.90478 1.21895 1.01726 0.94320 1.02862 1.24380 1.01220 0.97724 0.87523 1.22615 1.02758 0.98680 0.97337 1.24978 1.03181 1.00361 0.92121 1.22663 0.74169 0.78388 0.94037 1.90279 1.37070 1.38179 1.65967 1.19507 1.00090 0.99941 0.85319 1.21122 1.31507 1.10971 0.92480 0.90905 1.25011 0.95973 0.97070 0.96276 1.69966 1.44581 1.38846 1.00068 0.86486 0.80783 0.82785 0.76984 1.20060 1.21234 1.20068 1.74314 1.08776 1.02488 1.15800 1.84778 1.54780 1.42844 1.13316 0.91466 0.92053 0.91661 0.88089 0.92051 0.91462 0.91668 0.80865 0.92398 0.92387 0.92715 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.14 9.18 37.16 0.34 -0.80 16 2 C -0.01 -0.08 3.34 -91.77 -0.31 -0.38 16 3 C -0.15 -1.14 9.17 37.15 0.34 -0.80 16 4 C -0.05 -0.60 5.98 -35.36 -0.21 -0.81 16 5 C -0.19 -3.03 10.90 -39.02 -0.43 -3.46 16 6 C -0.05 -0.98 7.12 -82.64 -0.59 -1.57 16 7 C 0.43 10.35 7.15 -30.41 -0.22 10.13 16 8 O -0.44 -11.26 16.03 5.95 0.10 -11.16 16 9 C -0.01 -0.32 5.27 -29.04 -0.15 -0.48 16 10 C -0.52 -15.44 8.92 -34.44 -0.31 -15.75 16 11 H 0.07 2.17 6.76 -52.48 -0.35 1.82 16 12 C 0.06 1.70 5.46 -17.82 -0.10 1.61 16 13 N -0.90 -27.01 13.29 55.43 0.74 -26.28 16 14 Si 0.90 22.28 29.54 -169.99 -5.02 17.26 16 15 H -0.28 -6.70 7.11 56.52 0.40 -6.29 16 16 H -0.29 -6.91 7.11 56.52 0.40 -6.51 16 17 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 18 N -0.31 -6.10 11.98 33.25 0.40 -5.70 16 19 O 0.12 1.90 11.17 17.24 0.19 2.09 16 20 H 0.07 0.37 8.14 -51.93 -0.42 -0.05 16 21 H 0.06 0.49 8.14 -51.93 -0.42 0.07 16 22 H 0.06 0.52 8.14 -51.93 -0.42 0.10 16 23 H 0.10 0.72 8.12 -51.93 -0.42 0.30 16 24 H 0.06 0.49 8.14 -51.93 -0.42 0.07 16 25 H 0.07 0.37 8.14 -51.92 -0.42 -0.05 16 26 H 0.06 0.52 8.14 -51.93 -0.42 0.10 16 27 H 0.17 2.37 8.06 -52.49 -0.42 1.95 16 28 H 0.06 1.62 8.14 -51.93 -0.42 1.20 16 29 H 0.06 1.62 8.14 -51.93 -0.42 1.20 16 30 H 0.26 7.48 8.31 -40.82 -0.34 7.14 16 LS Contribution 272.21 15.07 4.10 4.10 Total: -1.00 -32.42 272.21 -4.84 -37.26 By element: Atomic # 1 Polarization: -1.54 SS G_CDS: -3.72 Total: -5.26 kcal Atomic # 6 Polarization: -10.69 SS G_CDS: -1.62 Total: -12.31 kcal Atomic # 7 Polarization: -33.11 SS G_CDS: 1.13 Total: -31.98 kcal Atomic # 8 Polarization: -9.36 SS G_CDS: 0.29 Total: -9.07 kcal Atomic # 14 Polarization: 22.28 SS G_CDS: -5.02 Total: 17.26 kcal Total LS contribution 4.10 Total: 4.10 kcal Total: -32.42 -4.84 -37.26 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259841299.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.665 kcal (2) G-P(sol) polarization free energy of solvation -32.425 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.240 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.837 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.261 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.403 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds