Wall clock time and date at job start Mon Mar 30 2020 03:12:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.38657 * 120.05299 * 2 1 4 4 O 1.35898 * 120.02726 * 0.02562 * 3 2 1 5 5 C 1.38747 * 119.94263 * 179.97438 * 3 2 1 6 6 C 1.38193 * 120.05823 * 0.02562 * 5 3 2 7 7 C 1.38161 * 120.10897 * 359.97438 * 6 5 3 8 8 C 1.50703 * 119.97305 * 180.02562 * 7 6 5 9 9 H 1.09004 * 109.46922 * 144.99426 * 8 7 6 10 10 N 1.46901 * 109.46991 * 24.99858 * 8 7 6 11 11 C 1.50693 * 109.47035 * 264.99719 * 8 7 6 12 12 H 1.08004 * 119.99870 * 5.24673 * 11 8 7 13 13 C 1.37880 * 120.00177 * 184.97488 * 11 8 7 14 14 N 1.31510 * 119.99575 * 6.76212 * 13 11 8 15 15 Si 1.86797 * 120.00080 * 186.76517 * 13 11 8 16 16 H 1.48505 * 109.46954 * 94.52944 * 15 13 11 17 17 H 1.48499 * 109.46886 * 214.52891 * 15 13 11 18 18 H 1.48500 * 109.47420 * 334.53275 * 15 13 11 19 19 C 1.38616 * 120.05524 * 180.26424 * 2 1 3 20 20 O 1.35898 * 120.02499 * 0.03058 * 19 2 1 21 21 H 1.09002 * 109.47100 * 90.00384 * 1 2 3 22 22 H 1.09007 * 109.47092 * 210.00315 * 1 2 3 23 23 H 1.08997 * 109.47430 * 330.00244 * 1 2 3 24 24 H 0.96697 * 114.00208 * 269.98164 * 4 3 2 25 25 H 1.08008 * 119.97306 * 179.97438 * 5 3 2 26 26 H 1.08001 * 119.94897 * 179.97438 * 6 5 3 27 27 H 1.00904 * 110.99749 * 173.30194 * 10 8 7 28 28 H 1.00898 * 110.99795 * 297.25361 * 10 8 7 29 29 H 0.97000 * 119.99916 * 180.02562 * 14 13 11 30 30 H 0.96698 * 113.99963 * 270.21595 * 20 19 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2014 1.2002 0.0000 4 8 1.5235 2.3780 0.0005 5 6 3.5889 1.1975 0.0005 6 6 4.2787 0.0001 0.0005 7 6 3.5891 -1.1971 0.0005 8 6 4.3445 -2.5011 0.0011 9 1 3.7980 -3.2373 0.5906 10 7 5.6759 -2.2955 0.5869 11 6 4.4897 -2.9982 -1.4141 12 1 4.1519 -2.3874 -2.2382 13 6 5.0588 -4.2303 -1.6571 14 7 5.3529 -5.0281 -0.6538 15 14 5.4119 -4.7664 -3.4113 16 1 6.8172 -4.4332 -3.7572 17 1 5.2067 -6.2322 -3.5317 18 1 4.4929 -4.0599 -4.3394 19 6 2.2012 -1.1998 -0.0055 20 8 1.5234 -2.3776 -0.0116 21 1 -0.3633 -0.0001 -1.0277 22 1 -0.3633 -0.8900 0.5139 23 1 -0.3634 0.8900 0.5138 24 1 1.3273 2.7193 -0.8827 25 1 4.1303 2.1321 0.0001 26 1 5.3587 0.0001 0.0005 27 1 6.1611 -3.1731 0.6991 28 1 6.2190 -1.6504 0.0328 29 1 5.7536 -5.8947 -0.8247 30 1 1.3239 -2.7211 0.8700 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260273161.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:12:12 Heat of formation + Delta-G solvation = -70.277795 kcal Electronic energy + Delta-G solvation = -15278.982516 eV Core-core repulsion = 12653.155698 eV Total energy + Delta-G solvation = -2625.826818 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 223.100 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -39.73286 -37.39335 -35.61521 -34.17648 -31.97953 -30.95058 -28.50403 -26.18838 -25.79558 -22.85224 -21.49633 -19.63068 -18.34937 -16.86470 -16.48272 -15.99241 -15.29180 -14.66749 -14.22467 -14.16991 -13.33650 -12.82924 -12.75902 -12.59537 -12.26773 -12.02161 -11.58075 -11.40696 -11.01036 -10.79651 -10.76004 -10.26193 -10.05709 -9.96466 -9.43413 -8.62807 -8.02866 -7.76522 -7.26572 -6.10083 -4.21496 1.80779 1.83697 3.22687 3.30615 3.35516 4.10276 4.37657 4.48421 5.06090 5.13883 5.28087 5.38874 5.67116 5.89938 5.98074 6.06372 6.14909 6.38417 6.49571 6.59685 6.86301 7.02057 7.06279 7.29464 7.66417 7.76102 7.96393 8.07949 8.35259 8.66010 8.82565 8.98570 9.46110 10.90816 Molecular weight = 223.10amu Principal moments of inertia in cm(-1) A = 0.035969 B = 0.008398 C = 0.007952 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 778.267912 B = 3333.234016 C = 3520.219127 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 C -0.144 4.144 3 C 0.082 3.918 4 O -0.499 6.499 5 C -0.152 4.152 6 C -0.091 4.091 7 C -0.053 4.053 8 C 0.244 3.756 9 H 0.057 0.943 10 N -0.851 5.851 11 C -0.532 4.532 12 H 0.054 0.946 13 C 0.067 3.933 14 N -0.892 5.892 15 Si 0.895 3.105 16 H -0.281 1.281 17 H -0.285 1.285 18 H -0.274 1.274 19 C 0.114 3.886 20 O -0.480 6.480 21 H 0.062 0.938 22 H 0.063 0.937 23 H 0.064 0.936 24 H 0.379 0.621 25 H 0.119 0.881 26 H 0.129 0.871 27 H 0.348 0.652 28 H 0.313 0.687 29 H 0.264 0.736 30 H 0.378 0.622 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.303 8.939 1.035 10.445 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.145 4.145 3 C 0.037 3.963 4 O -0.308 6.308 5 C -0.171 4.171 6 C -0.110 4.110 7 C -0.054 4.054 8 C 0.135 3.865 9 H 0.074 0.926 10 N -0.379 5.379 11 C -0.572 4.572 12 H 0.072 0.928 13 C -0.136 4.136 14 N -0.531 5.531 15 Si 0.723 3.277 16 H -0.207 1.207 17 H -0.211 1.211 18 H -0.199 1.199 19 C 0.069 3.931 20 O -0.288 6.288 21 H 0.081 0.919 22 H 0.082 0.918 23 H 0.083 0.917 24 H 0.233 0.767 25 H 0.137 0.863 26 H 0.147 0.853 27 H 0.162 0.838 28 H 0.123 0.877 29 H 0.074 0.926 30 H 0.233 0.767 Dipole moment (debyes) X Y Z Total from point charges -5.570 9.030 1.733 10.751 hybrid contribution 0.514 -0.817 -1.979 2.202 sum -5.056 8.214 -0.246 9.648 Atomic orbital electron populations 1.20450 0.91061 1.02190 1.01808 1.20357 0.96627 0.92342 1.05208 1.17908 0.89574 0.84062 1.04708 1.84783 1.76836 1.36298 1.32877 1.21310 0.93164 0.98618 1.04004 1.20752 1.00249 0.90654 0.99319 1.20897 0.92742 0.97653 0.94102 1.17843 0.87119 0.87442 0.94107 0.92558 1.59564 1.06441 1.17630 1.54278 1.21656 1.40249 1.02727 0.92592 0.92800 1.24992 0.95406 0.95870 0.97309 1.69875 1.42942 1.09708 1.30552 0.86531 0.78516 0.77832 0.84855 1.20708 1.21110 1.19851 1.17951 0.89395 0.84353 1.01441 1.84902 1.75983 1.35696 1.32244 0.91895 0.91763 0.91698 0.76674 0.86265 0.85315 0.83797 0.87685 0.92635 0.76691 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.43 9.56 36.01 0.34 -1.09 16 2 C -0.14 -2.56 5.91 -104.33 -0.62 -3.18 16 3 C 0.08 1.38 6.67 -39.24 -0.26 1.12 16 4 O -0.50 -7.09 12.55 -19.42 -0.24 -7.33 16 5 C -0.15 -2.61 9.98 -39.41 -0.39 -3.01 16 6 C -0.09 -1.77 9.26 -39.63 -0.37 -2.14 16 7 C -0.05 -1.15 5.01 -104.44 -0.52 -1.68 16 8 C 0.24 6.03 2.52 -70.02 -0.18 5.86 16 9 H 0.06 1.53 7.67 -51.93 -0.40 1.13 16 10 N -0.85 -19.59 8.73 -6.65 -0.06 -19.64 16 11 C -0.53 -14.45 8.64 -34.44 -0.30 -14.75 16 12 H 0.05 1.52 7.75 -52.48 -0.41 1.11 16 13 C 0.07 1.81 5.35 -17.82 -0.10 1.72 16 14 N -0.89 -24.69 12.18 55.43 0.67 -24.02 16 15 Si 0.89 21.23 29.54 -169.99 -5.02 16.21 16 16 H -0.28 -6.56 7.11 56.52 0.40 -6.16 16 17 H -0.29 -6.74 7.11 56.52 0.40 -6.34 16 18 H -0.27 -6.55 7.11 56.52 0.40 -6.15 16 19 C 0.11 2.31 6.65 -39.24 -0.26 2.05 16 20 O -0.48 -9.48 11.69 -19.42 -0.23 -9.71 16 21 H 0.06 0.87 8.14 -51.93 -0.42 0.44 16 22 H 0.06 0.88 7.54 -51.93 -0.39 0.49 16 23 H 0.06 0.86 7.53 -51.93 -0.39 0.47 16 24 H 0.38 3.63 9.06 45.56 0.41 4.04 16 25 H 0.12 1.74 8.06 -52.48 -0.42 1.32 16 26 H 0.13 2.38 6.35 -52.49 -0.33 2.04 16 27 H 0.35 8.55 7.81 -39.29 -0.31 8.24 16 28 H 0.31 6.78 7.33 -39.29 -0.29 6.50 16 29 H 0.26 6.99 8.31 -40.82 -0.34 6.65 16 30 H 0.38 5.78 9.06 45.56 0.41 6.19 16 LS Contribution 260.19 15.07 3.92 3.92 Total: -1.00 -30.39 260.19 -5.27 -35.67 By element: Atomic # 1 Polarization: 21.66 SS G_CDS: -1.67 Total: 19.99 kcal Atomic # 6 Polarization: -12.44 SS G_CDS: -2.65 Total: -15.09 kcal Atomic # 7 Polarization: -44.28 SS G_CDS: 0.62 Total: -43.66 kcal Atomic # 8 Polarization: -16.57 SS G_CDS: -0.47 Total: -17.04 kcal Atomic # 14 Polarization: 21.23 SS G_CDS: -5.02 Total: 16.21 kcal Total LS contribution 3.92 Total: 3.92 kcal Total: -30.39 -5.27 -35.67 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260273161.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.612 kcal (2) G-P(sol) polarization free energy of solvation -30.393 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.005 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.273 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.666 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.278 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds