Wall clock time and date at job start Mon Mar 30 2020 03:08:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 N 1.30701 * 127.02090 * 2 1 4 4 O 1.21462 * 111.69381 * 179.97438 * 3 2 1 5 5 C 1.33167 * 111.26765 * 359.92465 * 4 3 2 6 6 C 1.35512 * 106.46289 * 0.13388 * 5 4 3 7 7 C 1.50077 * 124.86370 * 179.84367 * 6 5 4 8 8 O 1.42900 * 109.71003 * 103.63747 * 7 6 5 9 9 C 1.50704 * 109.70954 * 224.21968 * 7 6 5 10 10 H 1.07991 * 120.00339 * 5.36414 * 9 7 6 11 11 C 1.37879 * 119.99643 * 185.08014 * 9 7 6 12 12 N 1.31513 * 120.00548 * 355.32191 * 11 9 7 13 13 Si 1.86804 * 119.99806 * 175.32393 * 11 9 7 14 14 H 1.48500 * 109.47235 * 359.97438 * 13 11 9 15 15 H 1.48499 * 109.47455 * 120.00056 * 13 11 9 16 16 H 1.48501 * 109.46964 * 240.00207 * 13 11 9 17 17 C 1.53544 * 108.23519 * 343.90795 * 7 6 5 18 18 C 1.53087 * 109.53322 * 49.23381 * 17 7 6 19 19 C 1.50565 * 129.72925 * 180.27000 * 5 4 3 20 20 H 1.08992 * 109.47664 * 264.96000 * 1 2 3 21 21 H 1.09007 * 109.46606 * 24.95758 * 1 2 3 22 22 H 1.08997 * 109.47149 * 144.95172 * 1 2 3 23 23 H 0.96701 * 114.00180 * 60.58786 * 8 7 6 24 24 H 0.96991 * 120.00447 * 184.99749 * 12 11 9 25 25 H 1.08995 * 109.46339 * 169.26018 * 17 7 6 26 26 H 1.09000 * 109.45973 * 289.22424 * 17 7 6 27 27 H 1.09005 * 109.42811 * 170.04001 * 18 17 7 28 28 H 1.09003 * 109.37936 * 50.17761 * 18 17 7 29 29 H 1.09002 * 109.69612 * 282.90711 * 19 5 4 30 30 H 1.09000 * 109.69392 * 43.49402 * 19 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 7 2.2939 1.0435 0.0000 4 8 3.4653 0.7225 0.0005 5 6 3.6031 -0.6020 0.0025 6 6 2.3503 -1.1185 0.0003 7 6 2.0265 -2.5839 -0.0019 8 8 1.6111 -2.9877 1.3044 9 6 0.9253 -2.8596 -0.9931 10 1 0.5600 -2.0668 -1.6288 11 6 0.3883 -4.1256 -1.0924 12 7 0.8979 -5.1132 -0.3893 13 14 -1.0634 -4.4381 -2.2259 14 1 -1.4468 -3.1716 -2.8998 15 1 -0.6858 -5.4481 -3.2470 16 1 -2.2120 -4.9429 -1.4314 17 6 3.2916 -3.3549 -0.4055 18 6 4.4774 -2.8659 0.4301 19 6 4.8545 -1.4394 0.0093 20 1 -0.3634 -0.0903 1.0236 21 1 -0.3633 0.9318 -0.4337 22 1 -0.3633 -0.8413 -0.5901 23 1 0.8210 -2.5312 1.6245 24 1 0.5683 -6.0170 -0.5126 25 1 3.1389 -4.4199 -0.2310 26 1 3.4980 -3.1861 -1.4623 27 1 5.3293 -3.5275 0.2727 28 1 4.2035 -2.8723 1.4852 29 1 5.2920 -1.4542 -0.9890 30 1 5.5705 -1.0242 0.7186 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260910953.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:08:54 Heat of formation + Delta-G solvation = 1.302178 kcal Electronic energy + Delta-G solvation = -16067.649698 eV Core-core repulsion = 13444.926820 eV Total energy + Delta-G solvation = -2622.722878 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 223.100 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -44.14457 -37.57392 -34.29999 -33.57040 -32.25695 -29.86015 -28.62114 -27.93262 -25.23342 -22.68198 -21.82850 -20.03542 -18.44190 -17.17828 -16.71108 -16.43506 -14.81095 -14.70925 -13.86435 -13.39383 -13.14034 -13.02809 -12.70548 -12.32975 -12.13650 -11.93497 -11.35419 -11.23184 -11.02653 -10.57570 -10.49016 -10.21151 -10.16955 -9.90823 -9.21384 -9.04919 -8.58281 -8.37348 -8.22215 -6.07172 -4.25277 2.18717 3.06363 3.21311 3.30939 3.33887 3.76228 4.31699 4.96705 5.16114 5.24709 5.59718 5.63617 5.72107 5.85027 6.07143 6.10688 6.20836 6.25036 6.34084 6.36290 6.49002 6.70089 6.72380 6.99624 7.16241 7.48518 7.72649 7.80659 8.12482 8.72131 8.98560 9.25409 9.50107 10.93558 Molecular weight = 223.10amu Principal moments of inertia in cm(-1) A = 0.030015 B = 0.012661 C = 0.010007 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 932.630221 B = 2211.028869 C = 2797.309283 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 C 0.038 3.962 3 N -0.397 5.397 4 O 0.083 5.917 5 C -0.056 4.056 6 C -0.185 4.185 7 C 0.323 3.677 8 O -0.549 6.549 9 C -0.558 4.558 10 H 0.061 0.939 11 C 0.085 3.915 12 N -0.854 5.854 13 Si 0.885 3.115 14 H -0.272 1.272 15 H -0.283 1.283 16 H -0.282 1.282 17 C -0.093 4.093 18 C -0.121 4.121 19 C -0.028 4.028 20 H 0.071 0.929 21 H 0.059 0.941 22 H 0.104 0.896 23 H 0.349 0.651 24 H 0.260 0.740 25 H 0.095 0.905 26 H 0.054 0.946 27 H 0.062 0.938 28 H 0.068 0.932 29 H 0.082 0.918 30 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.595 4.195 0.751 5.576 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C -0.119 4.119 3 N -0.107 5.107 4 O 0.021 5.979 5 C -0.120 4.120 6 C -0.190 4.190 7 C 0.283 3.717 8 O -0.352 6.352 9 C -0.596 4.596 10 H 0.079 0.921 11 C -0.122 4.122 12 N -0.489 5.489 13 Si 0.713 3.287 14 H -0.197 1.197 15 H -0.209 1.209 16 H -0.208 1.208 17 C -0.130 4.130 18 C -0.158 4.158 19 C -0.066 4.066 20 H 0.090 0.910 21 H 0.078 0.922 22 H 0.123 0.877 23 H 0.193 0.807 24 H 0.070 0.930 25 H 0.114 0.886 26 H 0.072 0.928 27 H 0.081 0.919 28 H 0.087 0.913 29 H 0.100 0.900 30 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 3.879 4.924 0.784 6.317 hybrid contribution -1.340 -0.511 -0.711 1.600 sum 2.539 4.412 0.073 5.091 Atomic orbital electron populations 1.20327 0.86405 1.03747 1.03176 1.23097 0.98663 0.88838 1.01281 1.74111 0.89188 1.24256 1.23158 1.84579 1.21896 1.22786 1.68603 1.24206 0.99152 0.83263 1.05376 1.22243 0.90794 1.01013 1.04906 1.16967 0.92589 0.79694 0.82443 1.86513 1.47135 1.67483 1.34036 1.21505 1.19885 0.96087 1.22116 0.92058 1.24964 0.96481 0.96134 0.94599 1.70014 1.41073 0.99696 1.38111 0.86661 0.82948 0.78451 0.80673 1.19669 1.20902 1.20792 1.21560 0.91206 1.03200 0.97077 1.21751 0.99539 0.92718 1.01810 1.20176 0.90569 0.93576 1.02323 0.91023 0.92175 0.87737 0.80696 0.92950 0.88642 0.92750 0.91895 0.91346 0.89977 0.90559 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -1.44 10.24 36.00 0.37 -1.07 16 2 C 0.04 0.81 7.14 -82.38 -0.59 0.22 16 3 N -0.40 -8.40 12.10 33.47 0.41 -7.99 16 4 O 0.08 1.68 11.20 19.24 0.22 1.89 16 5 C -0.06 -1.11 7.39 -35.35 -0.26 -1.37 16 6 C -0.19 -4.09 5.07 -105.21 -0.53 -4.62 16 7 C 0.32 7.65 0.66 -92.94 -0.06 7.59 16 8 O -0.55 -13.41 11.84 -35.23 -0.42 -13.82 16 9 C -0.56 -14.18 6.89 -34.44 -0.24 -14.41 16 10 H 0.06 1.57 6.20 -52.49 -0.33 1.25 16 11 C 0.08 2.18 5.27 -17.82 -0.09 2.09 16 12 N -0.85 -22.94 11.21 55.43 0.62 -22.32 16 13 Si 0.89 19.98 29.54 -169.99 -5.02 14.96 16 14 H -0.27 -6.09 7.11 56.52 0.40 -5.69 16 15 H -0.28 -6.41 7.11 56.52 0.40 -6.01 16 16 H -0.28 -6.38 7.11 56.52 0.40 -5.97 16 17 C -0.09 -2.07 4.61 -26.40 -0.12 -2.19 16 18 C -0.12 -2.17 5.87 -26.46 -0.16 -2.33 16 19 C -0.03 -0.46 6.31 -27.72 -0.17 -0.63 16 20 H 0.07 1.17 8.14 -51.93 -0.42 0.74 16 21 H 0.06 0.98 8.14 -51.93 -0.42 0.56 16 22 H 0.10 2.03 5.51 -51.93 -0.29 1.75 16 23 H 0.35 7.78 9.04 45.56 0.41 8.20 16 24 H 0.26 6.71 8.32 -40.82 -0.34 6.37 16 25 H 0.10 2.37 6.76 -51.93 -0.35 2.02 16 26 H 0.05 1.21 8.08 -51.93 -0.42 0.79 16 27 H 0.06 0.97 8.14 -51.93 -0.42 0.54 16 28 H 0.07 1.32 7.81 -51.93 -0.41 0.91 16 29 H 0.08 1.20 8.14 -51.93 -0.42 0.77 16 30 H 0.08 1.04 8.14 -51.93 -0.42 0.62 16 LS Contribution 249.09 15.07 3.75 3.75 Total: -1.00 -28.52 249.09 -4.93 -33.44 By element: Atomic # 1 Polarization: 9.46 SS G_CDS: -2.62 Total: 6.83 kcal Atomic # 6 Polarization: -14.89 SS G_CDS: -1.86 Total: -16.75 kcal Atomic # 7 Polarization: -31.33 SS G_CDS: 1.03 Total: -30.31 kcal Atomic # 8 Polarization: -11.73 SS G_CDS: -0.20 Total: -11.93 kcal Atomic # 14 Polarization: 19.98 SS G_CDS: -5.02 Total: 14.96 kcal Total LS contribution 3.75 Total: 3.75 kcal Total: -28.52 -4.93 -33.44 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260910953.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.743 kcal (2) G-P(sol) polarization free energy of solvation -28.515 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.228 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.926 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.441 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.302 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds