Wall clock time and date at job start Mon Mar 30 2020 03:14:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.30598 * 1 3 3 Si 1.86808 * 119.99733 * 2 1 4 4 H 1.48499 * 109.46621 * 179.97438 * 3 2 1 5 5 H 1.48498 * 109.47152 * 299.99728 * 3 2 1 6 6 H 1.48500 * 109.47183 * 59.99990 * 3 2 1 7 7 C 1.40428 * 120.00064 * 179.97438 * 2 1 3 8 8 H 1.07997 * 119.99829 * 162.53187 * 7 2 1 9 9 C 1.39840 * 119.99818 * 342.52774 * 7 2 1 10 10 C 1.40406 * 120.56683 * 334.43478 * 9 7 2 11 11 C 1.38225 * 121.99353 * 179.74141 * 10 9 7 12 12 C 1.37810 * 122.65306 * 0.24097 * 11 10 9 13 13 Cl 1.73595 * 120.09340 * 180.02562 * 12 11 10 14 14 C 1.45152 * 119.81974 * 0.02562 * 12 11 10 15 15 N 1.30958 * 138.79351 * 179.97438 * 14 12 11 16 16 O 1.21543 * 108.91992 * 180.02562 * 15 14 12 17 17 N 1.21520 * 116.22860 * 359.97438 * 16 15 14 18 18 C 1.30137 * 109.21459 * 359.97438 * 17 16 15 19 19 H 0.97001 * 119.99757 * 0.02562 * 1 2 3 20 20 H 1.08004 * 119.00032 * 0.02959 * 10 9 7 21 21 H 1.08003 * 118.67718 * 180.26142 * 11 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3060 0.0000 0.0000 3 14 2.2399 1.6179 0.0000 4 1 3.6999 1.3464 0.0006 5 1 1.8812 2.3965 -1.2125 6 1 1.8812 2.3965 1.2125 7 6 2.0081 -1.2161 0.0005 8 1 3.0507 -1.2378 -0.2802 9 6 1.3573 -2.3991 0.3647 10 6 0.2380 -2.3666 1.2117 11 6 -0.4307 -3.5169 1.5861 12 6 -0.0475 -4.7710 1.1625 13 17 -0.9365 -6.1718 1.6735 14 6 1.1015 -4.9176 0.2878 15 7 1.7668 -5.8721 -0.3133 16 8 2.6819 -5.3786 -0.9428 17 7 2.7819 -4.1689 -0.8860 18 6 1.8352 -3.6960 -0.1285 19 1 -0.4850 0.8401 -0.0004 20 1 -0.1140 -1.4135 1.5781 21 1 -1.2884 -3.4294 2.2367 RHF calculation, no. of doubly occupied orbitals= 36 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261274577.mol2 21 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:14:03 Heat of formation + Delta-G solvation = 107.071930 kcal Electronic energy + Delta-G solvation = -12639.872043 eV Core-core repulsion = 10125.352751 eV Total energy + Delta-G solvation = -2514.519292 eV No. of doubly occupied orbitals = 36 Molecular weight (most abundant/longest-lived isotopes) = 224.009 amu Computer time = 0.16 seconds Orbital eigenvalues (eV) -45.29563 -37.08399 -35.43362 -34.18647 -33.37257 -31.73025 -29.98717 -25.91729 -23.97653 -23.31623 -20.15809 -18.29617 -17.67198 -16.94462 -16.74727 -15.65674 -14.70579 -13.64137 -13.52086 -12.45378 -12.14862 -12.01258 -11.78280 -11.50794 -11.04615 -10.90548 -10.75223 -10.46095 -10.18195 -10.09115 -9.93406 -9.66489 -8.63564 -7.63379 -7.38083 -4.90218 1.32310 2.57237 2.61906 2.70930 2.79222 3.05138 3.37021 3.42205 3.93391 4.42225 4.70423 4.89960 5.23355 5.85393 6.12914 6.26531 6.49451 6.71326 6.93557 7.22624 7.37798 7.57085 7.90212 8.04307 8.15604 9.31285 9.73480 Molecular weight = 224.01amu Principal moments of inertia in cm(-1) A = 0.036409 B = 0.009632 C = 0.007779 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 768.856478 B = 2906.146733 C = 3598.792912 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.721 5.721 2 C 0.062 3.938 3 Si 0.928 3.072 4 H -0.251 1.251 5 H -0.264 1.264 6 H -0.261 1.261 7 C -0.362 4.362 8 H 0.100 0.900 9 C 0.156 3.844 10 C -0.263 4.263 11 C 0.018 3.982 12 C -0.204 4.204 13 Cl -0.112 7.112 14 C 0.087 3.913 15 N -0.406 5.406 16 O 0.299 5.701 17 N -0.350 5.350 18 C 0.005 3.995 19 H 0.299 0.701 20 H 0.133 0.867 21 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.139 2.679 1.576 3.111 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.341 5.341 2 C -0.166 4.166 3 Si 0.749 3.251 4 H -0.174 1.174 5 H -0.189 1.189 6 H -0.186 1.186 7 C -0.389 4.389 8 H 0.118 0.882 9 C 0.150 3.850 10 C -0.286 4.286 11 C -0.004 4.004 12 C -0.237 4.237 13 Cl -0.084 7.084 14 C -0.066 4.066 15 N -0.144 5.144 16 O 0.088 5.912 17 N -0.074 5.074 18 C -0.155 4.155 19 H 0.111 0.889 20 H 0.151 0.849 21 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges 0.684 1.994 0.890 2.288 hybrid contribution -0.526 0.967 0.459 1.193 sum 0.158 2.961 1.349 3.258 Atomic orbital electron populations 1.69718 1.08283 1.31620 1.24481 1.26386 0.95138 1.02776 0.92304 0.85887 0.81156 0.78466 0.79575 1.17386 1.18899 1.18582 1.20075 0.98605 0.90775 1.29416 0.88183 1.17464 0.91933 0.85896 0.89747 1.20492 1.02986 0.97128 1.08011 1.20301 0.96121 0.89716 0.94300 1.19267 1.01044 0.86841 1.16512 1.98208 1.75607 1.43855 1.90748 1.23344 0.97488 0.87650 0.98148 1.75068 1.03706 1.21478 1.14149 1.85254 1.38825 1.14832 1.52332 1.74543 1.20872 0.93751 1.18283 1.24460 0.93710 0.98264 0.99017 0.88872 0.84923 0.87140 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.72 -15.14 10.99 55.57 0.61 -14.53 14 2 C 0.06 1.26 5.13 -17.25 -0.09 1.17 14 3 Si 0.93 15.05 29.60 -169.99 -5.03 10.02 14 4 H -0.25 -4.10 7.11 56.52 0.40 -3.70 14 5 H -0.26 -4.23 7.11 56.52 0.40 -3.83 14 6 H -0.26 -4.13 7.11 56.52 0.40 -3.73 14 7 C -0.36 -8.23 9.05 -38.16 -0.35 -8.58 14 8 H 0.10 2.20 7.91 -52.49 -0.42 1.79 14 9 C 0.16 3.77 5.69 -105.04 -0.60 3.17 14 10 C -0.26 -6.07 8.63 -38.77 -0.33 -6.41 14 11 C 0.02 0.38 9.66 -39.74 -0.38 0.00 14 12 C -0.20 -4.74 6.53 -37.00 -0.24 -4.98 14 13 Cl -0.11 -2.32 29.00 -51.86 -1.50 -3.82 14 14 C 0.09 2.14 7.79 -81.29 -0.63 1.51 14 15 N -0.41 -9.71 12.30 32.67 0.40 -9.31 14 16 O 0.30 6.83 11.67 26.91 0.31 7.14 14 17 N -0.35 -8.31 12.24 32.69 0.40 -7.91 14 18 C 0.00 0.11 7.72 -80.93 -0.62 -0.51 14 19 H 0.30 5.45 8.29 -40.82 -0.34 5.11 14 20 H 0.13 3.00 6.14 -52.48 -0.32 2.67 14 21 H 0.11 2.12 8.06 -52.48 -0.42 1.70 14 LS Contribution 217.71 15.07 3.28 3.28 Total: -1.00 -24.67 217.71 -5.07 -29.74 By element: Atomic # 1 Polarization: 0.31 SS G_CDS: -0.29 Total: 0.02 kcal Atomic # 6 Polarization: -11.37 SS G_CDS: -3.25 Total: -14.62 kcal Atomic # 7 Polarization: -33.17 SS G_CDS: 1.41 Total: -31.76 kcal Atomic # 8 Polarization: 6.83 SS G_CDS: 0.31 Total: 7.14 kcal Atomic # 14 Polarization: 15.05 SS G_CDS: -5.03 Total: 10.02 kcal Atomic # 17 Polarization: -2.32 SS G_CDS: -1.50 Total: -3.82 kcal Total LS contribution 3.28 Total: 3.28 kcal Total: -24.67 -5.07 -29.74 kcal The number of atoms in the molecule is 21 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261274577.mol2 21 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 136.816 kcal (2) G-P(sol) polarization free energy of solvation -24.674 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 112.143 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.071 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.744 kcal (6) G-S(sol) free energy of system = (1) + (5) 107.072 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.16 seconds