Wall clock time and date at job start Mon Mar 30 2020 02:59:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09002 * 109.47153 * 2 1 4 4 F 1.39900 * 109.47010 * 119.99626 * 2 1 3 5 5 C 1.52992 * 109.47482 * 239.99783 * 2 1 3 6 6 H 1.09001 * 109.47066 * 60.00169 * 5 2 1 7 7 C 1.50698 * 109.47592 * 179.97438 * 5 2 1 8 8 H 1.07998 * 120.00218 * 119.99906 * 7 5 2 9 9 C 1.37875 * 120.00046 * 300.00559 * 7 5 2 10 10 N 1.31511 * 120.00192 * 359.97438 * 9 7 5 11 11 Si 1.86798 * 119.99979 * 179.97438 * 9 7 5 12 12 H 1.48499 * 109.47548 * 359.97438 * 11 9 7 13 13 H 1.48504 * 109.47233 * 119.99722 * 11 9 7 14 14 H 1.48498 * 109.47163 * 239.99651 * 11 9 7 15 15 C 1.50696 * 109.47490 * 300.00187 * 5 2 1 16 16 C 1.38172 * 120.02775 * 300.00062 * 15 5 2 17 17 C 1.38244 * 120.05658 * 179.97438 * 16 15 5 18 18 C 1.38277 * 120.11097 * 0.02562 * 17 16 15 19 19 C 1.38123 * 120.06118 * 0.02562 * 18 17 16 20 20 C 1.38711 * 120.03104 * 119.71830 * 15 5 2 21 21 O 1.35902 * 120.05407 * 0.02562 * 20 15 5 22 22 H 1.09002 * 109.47153 * 180.02562 * 1 2 3 23 23 H 1.09001 * 109.46832 * 60.00191 * 1 2 3 24 24 H 1.09004 * 109.47261 * 300.00172 * 1 2 3 25 25 H 0.96996 * 120.00505 * 179.97438 * 10 9 7 26 26 H 1.08000 * 119.97026 * 359.97206 * 16 15 5 27 27 H 1.08002 * 119.94082 * 179.97438 * 17 16 15 28 28 H 1.08008 * 119.97079 * 179.97438 * 18 17 16 29 29 H 1.08001 * 120.03516 * 179.97438 * 19 18 17 30 30 H 0.96701 * 114.00164 * 90.00041 * 21 20 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 9 1.9963 -0.6594 1.1423 5 6 2.0400 -0.7212 -1.2491 6 1 1.6768 -0.2074 -2.1391 7 6 3.5470 -0.7207 -1.2495 8 1 4.0874 -1.6558 -1.2494 9 6 4.2360 0.4736 -1.2497 10 7 3.5781 1.6123 -1.2502 11 14 6.1040 0.4742 -1.2494 12 1 6.5995 -0.9256 -1.2483 13 1 6.5990 1.1740 -2.4621 14 1 6.5985 1.1749 -0.0371 15 6 1.5378 -2.1420 -1.2492 16 6 1.8711 -2.9933 -0.2132 17 6 1.4103 -4.2967 -0.2124 18 6 0.6152 -4.7520 -1.2481 19 6 0.2800 -3.9054 -2.2867 20 6 0.7356 -2.5947 -2.2863 21 8 0.4020 -1.7578 -3.3038 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3634 0.5139 0.8900 25 1 4.0627 2.4525 -1.2500 26 1 2.4923 -2.6402 0.5966 27 1 1.6723 -4.9606 0.5981 28 1 0.2567 -5.7708 -1.2454 29 1 -0.3407 -4.2615 -3.0956 30 1 1.0247 -1.7702 -4.0435 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260173094.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:59:37 Heat of formation + Delta-G solvation = -81.202788 kcal Electronic energy + Delta-G solvation = -15757.450286 eV Core-core repulsion = 13045.803852 eV Total energy + Delta-G solvation = -2711.646434 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 224.095 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -46.19993 -39.15946 -35.94978 -34.39532 -31.70357 -29.86306 -29.00075 -26.93339 -23.51908 -21.96110 -21.52954 -19.40692 -17.64503 -16.51181 -15.70726 -15.26231 -14.79712 -14.40818 -14.23072 -13.77985 -13.61870 -12.98092 -12.44008 -12.12985 -11.65401 -11.63305 -11.32358 -11.27904 -11.01471 -10.89098 -10.75830 -10.18611 -9.96014 -9.73509 -9.21055 -8.99222 -8.49009 -8.13293 -7.75066 -6.12867 -4.18589 1.91030 2.05701 3.25222 3.33650 3.38113 4.28451 4.40004 4.92805 5.18474 5.46428 5.55601 5.73499 5.87965 6.05321 6.10555 6.17544 6.26253 6.53123 6.61348 6.65890 6.87170 6.92909 6.97849 7.11974 7.21246 7.50200 7.58137 7.70544 7.92231 8.20689 8.31377 8.82609 9.46436 10.93210 Molecular weight = 224.10amu Principal moments of inertia in cm(-1) A = 0.027953 B = 0.010686 C = 0.010155 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1001.437800 B = 2619.514765 C = 2756.566761 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.091 3.909 3 H 0.112 0.888 4 F -0.227 7.227 5 C 0.056 3.944 6 H 0.059 0.941 7 C -0.505 4.505 8 H 0.061 0.939 9 C 0.063 3.937 10 N -0.893 5.893 11 Si 0.898 3.102 12 H -0.272 1.272 13 H -0.284 1.284 14 H -0.283 1.283 15 C -0.059 4.059 16 C -0.093 4.093 17 C -0.139 4.139 18 C -0.132 4.132 19 C -0.156 4.156 20 C 0.091 3.909 21 O -0.497 6.497 22 H 0.050 0.950 23 H 0.064 0.936 24 H 0.045 0.955 25 H 0.264 0.736 26 H 0.136 0.864 27 H 0.113 0.887 28 H 0.113 0.887 29 H 0.115 0.885 30 H 0.384 0.616 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.382 -6.702 -0.728 8.040 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.232 4.232 2 C 0.054 3.946 3 H 0.129 0.871 4 F -0.208 7.208 5 C 0.038 3.962 6 H 0.077 0.923 7 C -0.543 4.543 8 H 0.079 0.921 9 C -0.139 4.139 10 N -0.532 5.532 11 Si 0.725 3.275 12 H -0.197 1.197 13 H -0.210 1.210 14 H -0.209 1.209 15 C -0.059 4.059 16 C -0.111 4.111 17 C -0.157 4.157 18 C -0.150 4.150 19 C -0.174 4.174 20 C 0.047 3.953 21 O -0.306 6.306 22 H 0.069 0.931 23 H 0.083 0.917 24 H 0.064 0.936 25 H 0.074 0.926 26 H 0.154 0.846 27 H 0.131 0.869 28 H 0.131 0.869 29 H 0.133 0.867 30 H 0.239 0.761 Dipole moment (debyes) X Y Z Total from point charges -4.821 -6.385 -0.347 8.008 hybrid contribution 1.356 -0.092 -0.299 1.392 sum -3.465 -6.477 -0.646 7.374 Atomic orbital electron populations 1.22425 0.97901 1.01525 1.01368 1.21785 0.90587 0.99458 0.82747 0.87064 1.92598 1.90572 1.83775 1.53903 1.18374 0.96094 0.86594 0.95185 0.92297 1.21088 0.89638 0.92793 1.50746 0.92101 1.24967 0.98832 0.95431 0.94645 1.69802 1.35461 0.97397 1.50551 0.86433 0.85184 0.78234 0.77620 1.19661 1.20969 1.20864 1.20770 0.93026 0.98800 0.93349 1.21343 0.98780 0.92369 0.98627 1.21137 0.99505 0.96382 0.98649 1.20773 1.00263 0.98906 0.95051 1.21231 1.02925 0.93202 1.00075 1.18419 0.97705 0.88648 0.90559 1.84758 1.52166 1.63847 1.29858 0.93123 0.91690 0.93588 0.92642 0.84592 0.86881 0.86933 0.86662 0.76095 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -3.59 9.40 37.16 0.35 -3.24 16 2 C 0.09 2.17 3.43 -26.74 -0.09 2.08 16 3 H 0.11 2.92 6.07 -51.93 -0.32 2.61 16 4 F -0.23 -5.58 14.20 2.25 0.03 -5.55 16 5 C 0.06 1.37 1.89 -92.93 -0.18 1.20 16 6 H 0.06 1.53 6.99 -51.93 -0.36 1.16 16 7 C -0.50 -13.45 7.98 -34.44 -0.27 -13.72 16 8 H 0.06 1.64 7.60 -52.49 -0.40 1.24 16 9 C 0.06 1.68 5.30 -17.82 -0.09 1.58 16 10 N -0.89 -24.52 11.32 55.43 0.63 -23.89 16 11 Si 0.90 20.96 29.54 -169.99 -5.02 15.94 16 12 H -0.27 -6.31 7.11 56.52 0.40 -5.91 16 13 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 14 H -0.28 -6.61 7.11 56.52 0.40 -6.21 16 15 C -0.06 -1.28 3.49 -104.47 -0.36 -1.65 16 16 C -0.09 -1.92 8.37 -39.60 -0.33 -2.25 16 17 C -0.14 -2.40 10.04 -39.56 -0.40 -2.80 16 18 C -0.13 -2.11 10.04 -39.61 -0.40 -2.51 16 19 C -0.16 -2.65 9.99 -39.43 -0.39 -3.05 16 20 C 0.09 1.78 6.68 -39.21 -0.26 1.52 16 21 O -0.50 -9.18 12.27 -19.43 -0.24 -9.41 16 22 H 0.05 1.03 7.22 -51.93 -0.37 0.66 16 23 H 0.06 1.29 8.14 -51.93 -0.42 0.87 16 24 H 0.04 0.85 8.14 -51.93 -0.42 0.43 16 25 H 0.26 6.90 8.31 -40.82 -0.34 6.56 16 26 H 0.14 2.96 6.38 -52.49 -0.34 2.63 16 27 H 0.11 1.65 8.06 -52.49 -0.42 1.23 16 28 H 0.11 1.45 8.06 -52.48 -0.42 1.03 16 29 H 0.12 1.68 8.06 -52.49 -0.42 1.26 16 30 H 0.38 5.60 9.06 45.56 0.41 6.01 16 LS Contribution 257.36 15.07 3.88 3.88 Total: -1.00 -28.68 257.36 -5.78 -34.46 By element: Atomic # 1 Polarization: 10.04 SS G_CDS: -2.62 Total: 7.42 kcal Atomic # 6 Polarization: -20.40 SS G_CDS: -2.43 Total: -22.84 kcal Atomic # 7 Polarization: -24.52 SS G_CDS: 0.63 Total: -23.89 kcal Atomic # 8 Polarization: -9.18 SS G_CDS: -0.24 Total: -9.41 kcal Atomic # 9 Polarization: -5.58 SS G_CDS: 0.03 Total: -5.55 kcal Atomic # 14 Polarization: 20.96 SS G_CDS: -5.02 Total: 15.94 kcal Total LS contribution 3.88 Total: 3.88 kcal Total: -28.68 -5.78 -34.46 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260173094.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.739 kcal (2) G-P(sol) polarization free energy of solvation -28.685 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.424 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.779 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.463 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.203 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds