Wall clock time and date at job start Mon Mar 30 2020 03:18:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 C 1.48562 * 110.99726 * 2 1 4 4 C 1.54384 * 104.69653 * 159.09816 * 3 2 1 5 5 C 1.54259 * 105.05868 * 336.09351 * 4 3 2 6 6 C 1.48849 * 111.13111 * 115.32181 * 2 1 3 7 7 H 1.08999 * 110.40048 * 319.79895 * 6 2 1 8 8 C 1.50696 * 110.39170 * 82.22062 * 6 2 1 9 9 O 1.21557 * 120.00613 * 15.19927 * 8 6 2 10 10 C 1.40165 * 120.00115 * 195.20472 * 8 6 2 11 11 C 1.39470 * 120.00384 * 175.63585 * 10 8 6 12 12 N 1.38260 * 120.00024 * 172.99089 * 11 10 8 13 13 C 1.40039 * 119.99883 * 352.99200 * 11 10 8 14 14 H 1.07998 * 120.00381 * 326.87842 * 13 11 10 15 15 C 1.40681 * 119.99918 * 146.87445 * 13 11 10 16 16 N 1.30396 * 119.99762 * 170.50850 * 15 13 11 17 17 Si 1.86800 * 120.00183 * 350.51476 * 15 13 11 18 18 H 1.48493 * 109.47009 * 90.27659 * 17 15 13 19 19 H 1.48500 * 109.47123 * 210.27850 * 17 15 13 20 20 H 1.48504 * 109.46780 * 330.27564 * 17 15 13 21 21 H 1.08997 * 109.47120 * 59.87628 * 1 2 3 22 22 H 1.09004 * 109.46966 * 179.86963 * 1 2 3 23 23 H 1.08994 * 109.47277 * 299.86723 * 1 2 3 24 24 H 1.09006 * 110.40978 * 40.26582 * 3 2 1 25 25 H 1.08996 * 110.41553 * 277.94006 * 3 2 1 26 26 H 1.09004 * 110.31967 * 94.98471 * 4 3 2 27 27 H 1.08992 * 110.32087 * 217.19314 * 4 3 2 28 28 H 1.08998 * 110.32710 * 118.89770 * 5 4 3 29 29 H 1.09008 * 110.32321 * 241.00117 * 5 4 3 30 30 H 1.08004 * 119.99890 * 355.63855 * 10 8 6 31 31 H 0.97005 * 120.00010 * 352.87578 * 12 11 10 32 32 H 0.96999 * 120.00166 * 172.87638 * 12 11 10 33 33 H 0.96999 * 119.99665 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 2.0014 1.3870 0.0000 4 6 3.4441 1.2528 0.5328 5 6 3.4469 -0.0504 1.3583 6 6 2.0056 -0.5938 1.2550 7 1 1.4148 -0.2696 2.1117 8 6 2.0166 -2.0978 1.1614 9 8 1.8881 -2.6407 0.0814 10 6 2.1748 -2.8710 2.3198 11 6 2.0940 -4.2614 2.2468 12 7 2.3925 -5.0305 3.3563 13 6 1.7105 -4.8785 1.0496 14 1 1.0019 -4.3933 0.3947 15 6 2.2484 -6.1305 0.6999 16 7 1.7595 -6.7901 -0.3132 17 14 3.6627 -6.8481 1.6869 18 1 3.1229 -7.6745 2.7962 19 1 4.5039 -7.6945 0.8029 20 1 4.4857 -5.7456 2.2459 21 1 -0.3633 0.5157 -0.8888 22 1 -0.3633 -1.0277 -0.0023 23 1 -0.3633 0.5117 0.8911 24 1 1.4098 2.0212 0.6603 25 1 2.0059 1.7925 -1.0117 26 1 4.1482 1.1774 -0.2960 27 1 3.6941 2.1032 1.1669 28 1 4.1524 -0.7653 0.9349 29 1 3.7001 0.1603 2.3974 30 1 2.3593 -2.3899 3.2691 31 1 2.7567 -4.6126 4.1524 32 1 2.2378 -5.9879 3.3386 33 1 2.1307 -7.6532 -0.5545 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000221912185.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:18:20 Heat of formation + Delta-G solvation = -18.770963 kcal Electronic energy + Delta-G solvation = -15691.605081 eV Core-core repulsion = 13138.418950 eV Total energy + Delta-G solvation = -2553.186131 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 224.127 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -38.85825 -36.84268 -35.11056 -32.84954 -31.70915 -29.37731 -28.28192 -26.04279 -25.11008 -22.04806 -20.47289 -19.66079 -18.01241 -17.23315 -16.23035 -15.41695 -15.04198 -14.67909 -14.00964 -13.64446 -13.31678 -12.90019 -12.77250 -12.48753 -12.19151 -11.83069 -11.54180 -11.39072 -11.15950 -10.88916 -10.87734 -10.49079 -10.19907 -10.09070 -10.07023 -9.72493 -9.14893 -7.99264 -7.36418 -6.91832 -6.43411 -4.64156 2.76384 2.99318 3.09182 3.30097 3.82392 4.45294 4.55408 4.98615 5.11768 5.22201 5.36738 5.37486 5.74390 5.82904 5.85668 5.98036 6.00851 6.15736 6.28062 6.35718 6.42210 6.51497 6.73079 6.86549 7.30588 7.37413 7.55762 7.57044 7.98718 8.08287 8.45874 8.59657 9.01540 9.15919 10.00079 10.07951 Molecular weight = 224.13amu Principal moments of inertia in cm(-1) A = 0.040599 B = 0.007858 C = 0.007386 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 689.505363 B = 3562.264523 C = 3790.263300 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 N -0.490 5.490 3 C 0.029 3.971 4 C -0.123 4.123 5 C -0.105 4.105 6 C 0.025 3.975 7 H 0.052 0.948 8 C 0.385 3.615 9 O -0.505 6.505 10 C -0.517 4.517 11 C 0.348 3.652 12 N -0.879 5.879 13 C -0.407 4.407 14 H 0.128 0.872 15 C 0.075 3.925 16 N -0.787 5.787 17 Si 0.914 3.086 18 H -0.275 1.275 19 H -0.289 1.289 20 H -0.249 1.249 21 H 0.060 0.940 22 H 0.075 0.925 23 H 0.018 0.982 24 H 0.034 0.966 25 H 0.074 0.926 26 H 0.068 0.932 27 H 0.062 0.938 28 H 0.073 0.927 29 H 0.064 0.936 30 H 0.074 0.926 31 H 0.382 0.618 32 H 0.380 0.620 33 H 0.287 0.713 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.043 7.727 5.138 9.502 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.128 4.128 2 N -0.214 5.214 3 C -0.099 4.099 4 C -0.161 4.161 5 C -0.143 4.143 6 C -0.084 4.084 7 H 0.070 0.930 8 C 0.275 3.725 9 O -0.392 6.392 10 C -0.544 4.544 11 C 0.240 3.760 12 N -0.424 5.424 13 C -0.439 4.439 14 H 0.145 0.855 15 C -0.146 4.146 16 N -0.411 5.411 17 Si 0.741 3.259 18 H -0.201 1.201 19 H -0.217 1.217 20 H -0.173 1.173 21 H 0.079 0.921 22 H 0.094 0.906 23 H 0.036 0.964 24 H 0.052 0.948 25 H 0.092 0.908 26 H 0.087 0.913 27 H 0.080 0.920 28 H 0.092 0.908 29 H 0.083 0.917 30 H 0.092 0.908 31 H 0.209 0.791 32 H 0.211 0.789 33 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 2.063 7.047 3.855 8.293 hybrid contribution 0.407 0.015 1.629 1.679 sum 2.470 7.062 5.484 9.276 Atomic orbital electron populations 1.22430 0.88411 1.02689 0.99223 1.65292 1.07726 1.12798 1.35597 1.23124 0.95297 0.91237 1.00282 1.22290 0.96699 0.97552 0.99580 1.22093 0.96607 0.96274 0.99348 1.23283 0.95112 0.99717 0.90333 0.93019 1.19050 0.77462 0.86534 0.89409 1.90530 1.44826 1.72705 1.31110 1.20551 1.44185 0.91869 0.97768 1.17715 0.82482 0.90033 0.85747 1.43192 1.73789 1.09556 1.15818 1.19975 1.21450 0.99478 1.02974 0.85499 1.26471 0.97630 0.95474 0.95069 1.69459 1.36559 1.12165 1.22959 0.86333 0.81697 0.79055 0.78855 1.20148 1.21665 1.17268 0.92071 0.90628 0.96398 0.94750 0.90767 0.91299 0.91973 0.90835 0.91750 0.90755 0.79106 0.78920 0.90223 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.38 9.43 60.07 0.57 0.95 16 2 N -0.49 -9.68 4.93 -231.47 -1.14 -10.83 16 3 C 0.03 0.45 6.48 -2.18 -0.01 0.44 16 4 C -0.12 -1.81 7.00 -25.35 -0.18 -1.99 16 5 C -0.10 -1.85 6.54 -25.35 -0.17 -2.01 16 6 C 0.02 0.51 2.56 -67.06 -0.17 0.34 16 7 H 0.05 1.01 7.91 -51.93 -0.41 0.60 16 8 C 0.38 9.72 5.79 -33.59 -0.19 9.52 16 9 O -0.51 -14.80 13.58 5.32 0.07 -14.73 16 10 C -0.52 -12.74 9.69 -38.40 -0.37 -13.11 16 11 C 0.35 8.71 5.90 -83.83 -0.49 8.22 16 12 N -0.88 -17.94 7.05 32.47 0.23 -17.72 16 13 C -0.41 -11.37 7.96 -37.98 -0.30 -11.67 16 14 H 0.13 4.03 6.29 -52.49 -0.33 3.69 16 15 C 0.08 1.97 5.49 -17.24 -0.09 1.87 16 16 N -0.79 -21.15 13.91 55.59 0.77 -20.38 16 17 Si 0.91 19.59 24.72 -169.99 -4.20 15.39 16 18 H -0.27 -5.31 6.83 56.52 0.39 -4.93 16 19 H -0.29 -6.19 7.11 56.52 0.40 -5.78 16 20 H -0.25 -5.46 6.93 56.52 0.39 -5.07 16 21 H 0.06 0.95 8.14 -51.93 -0.42 0.53 16 22 H 0.07 1.52 8.06 -51.93 -0.42 1.11 16 23 H 0.02 0.28 7.98 -51.93 -0.41 -0.13 16 24 H 0.03 0.49 7.97 -51.93 -0.41 0.07 16 25 H 0.07 1.06 8.14 -51.93 -0.42 0.64 16 26 H 0.07 0.98 8.14 -51.93 -0.42 0.56 16 27 H 0.06 0.75 8.14 -51.93 -0.42 0.33 16 28 H 0.07 1.42 7.85 -51.93 -0.41 1.02 16 29 H 0.06 1.00 8.14 -51.92 -0.42 0.57 16 30 H 0.07 1.67 8.06 -52.48 -0.42 1.24 16 31 H 0.38 6.59 8.83 -40.82 -0.36 6.23 16 32 H 0.38 7.42 5.53 -40.82 -0.23 7.20 16 33 H 0.29 6.89 8.29 -40.82 -0.34 6.56 16 LS Contribution 269.38 15.07 4.06 4.06 Total: -1.00 -30.90 269.38 -6.31 -37.21 By element: Atomic # 1 Polarization: 19.11 SS G_CDS: -4.68 Total: 14.44 kcal Atomic # 6 Polarization: -6.03 SS G_CDS: -1.42 Total: -7.45 kcal Atomic # 7 Polarization: -48.78 SS G_CDS: -0.14 Total: -48.92 kcal Atomic # 8 Polarization: -14.80 SS G_CDS: 0.07 Total: -14.73 kcal Atomic # 14 Polarization: 19.59 SS G_CDS: -4.20 Total: 15.39 kcal Total LS contribution 4.06 Total: 4.06 kcal Total: -30.90 -6.31 -37.21 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000221912185.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.441 kcal (2) G-P(sol) polarization free energy of solvation -30.904 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.463 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.308 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.212 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.771 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds