Wall clock time and date at job start Mon Mar 30 2020 02:34:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 N 1.30257 * 125.61654 * 2 1 4 4 C 1.34480 * 108.70024 * 180.02562 * 3 2 1 5 5 C 1.50697 * 126.16729 * 180.02562 * 4 3 2 6 6 H 1.09002 * 109.47764 * 165.02622 * 5 4 3 7 7 C 1.53009 * 109.47157 * 285.02798 * 5 4 3 8 8 N 1.46505 * 109.46993 * 45.02187 * 5 4 3 9 9 C 1.46497 * 120.00502 * 300.00129 * 8 5 4 10 10 C 1.36939 * 119.99585 * 120.00241 * 8 5 4 11 11 H 1.07999 * 119.99820 * 23.59263 * 10 8 5 12 12 C 1.38818 * 119.99988 * 203.58838 * 10 8 5 13 13 N 1.31612 * 119.99431 * 11.36898 * 12 10 8 14 14 Si 1.86790 * 119.99920 * 191.36482 * 12 10 8 15 15 H 1.48506 * 109.47212 * 90.00718 * 14 12 10 16 16 H 1.48508 * 109.47127 * 210.00076 * 14 12 10 17 17 H 1.48495 * 109.47701 * 330.00383 * 14 12 10 18 18 C 1.34327 * 107.66744 * 0.26627 * 4 3 2 19 19 C 1.50699 * 126.44211 * 179.73387 * 18 4 3 20 20 O 1.33970 * 125.62505 * 180.02562 * 2 1 3 21 21 H 1.09000 * 109.47335 * 89.99896 * 1 2 3 22 22 H 1.09008 * 109.46665 * 209.99835 * 1 2 3 23 23 H 1.09001 * 109.47013 * 329.99373 * 1 2 3 24 24 H 1.08994 * 109.47342 * 180.02562 * 7 5 4 25 25 H 1.09007 * 109.46550 * 299.99997 * 7 5 4 26 26 H 1.08999 * 109.47212 * 59.99752 * 7 5 4 27 27 H 1.09000 * 109.47045 * 94.45769 * 9 8 5 28 28 H 1.08998 * 109.47447 * 214.46411 * 9 8 5 29 29 H 1.09005 * 109.47035 * 334.46087 * 9 8 5 30 30 H 0.97010 * 119.99770 * 179.97438 * 13 12 10 31 31 H 1.09008 * 109.47370 * 90.00167 * 19 18 4 32 32 H 1.08997 * 109.47361 * 209.99738 * 19 18 4 33 33 H 1.09004 * 109.47167 * 329.99893 * 19 18 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2655 1.0589 0.0000 4 6 3.5521 0.6676 -0.0006 5 6 4.7570 1.5728 -0.0002 6 1 5.6439 0.9972 0.2647 7 6 4.9398 2.1791 -1.3931 8 7 4.5612 2.6460 0.9776 9 6 3.4284 3.5647 0.8401 10 6 5.4372 2.7904 2.0203 11 1 6.4420 2.4030 1.9389 12 6 5.0336 3.4347 3.1817 13 7 3.7605 3.7072 3.3745 14 14 6.2973 3.9147 4.4707 15 1 6.8024 5.2815 4.1840 16 1 5.6665 3.8922 5.8150 17 1 7.4278 2.9524 4.4383 18 6 3.5698 -0.6755 -0.0069 19 6 4.7937 -1.5547 -0.0154 20 8 2.2873 -1.0890 -0.0005 21 1 -0.3634 0.0000 -1.0276 22 1 -0.3633 -0.8901 0.5139 23 1 -0.3633 0.8899 0.5139 24 1 5.8115 2.8335 -1.3930 25 1 5.0854 1.3806 -2.1207 26 1 4.0529 2.7548 -1.6580 27 1 2.5942 3.2057 1.4429 28 1 3.7223 4.5575 1.1809 29 1 3.1259 3.6144 -0.2059 30 1 3.4784 4.1572 4.1864 31 1 5.0926 -1.7715 1.0102 32 1 4.5677 -2.4871 -0.5327 33 1 5.6061 -1.0415 -0.5299 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260034331.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:34:44 Heat of formation + Delta-G solvation = 40.560353 kcal Electronic energy + Delta-G solvation = -15953.861573 eV Core-core repulsion = 13403.248241 eV Total energy + Delta-G solvation = -2550.613332 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 224.127 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -42.65317 -36.39192 -33.85567 -32.98623 -31.31923 -29.76378 -28.82960 -25.83394 -25.08431 -23.39522 -21.70836 -20.53384 -19.02131 -16.67250 -16.25854 -15.88054 -14.86751 -14.15414 -13.81086 -13.38815 -13.21419 -13.05257 -12.77418 -12.44024 -12.41398 -12.20237 -11.93735 -11.58284 -11.08111 -10.76701 -10.58730 -10.39451 -10.30545 -10.23017 -9.87009 -9.72010 -9.52988 -8.45053 -7.84349 -6.64861 -5.61947 -3.10031 2.05106 3.23110 3.39340 3.44553 3.48320 3.49261 4.53969 4.61093 5.26171 5.39181 5.40622 5.57895 5.59336 5.62576 5.72228 5.78214 5.92467 5.99980 6.14285 6.27369 6.44328 6.48751 6.67163 6.75293 6.92093 7.11742 7.21068 7.60904 7.87730 8.12520 8.48042 8.51941 9.33656 9.96658 10.48496 11.40630 Molecular weight = 224.13amu Principal moments of inertia in cm(-1) A = 0.029478 B = 0.009006 C = 0.008441 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 949.632588 B = 3108.454919 C = 3316.327312 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 C 0.160 3.840 3 N -0.448 5.448 4 C 0.012 3.988 5 C 0.244 3.756 6 H 0.075 0.925 7 C -0.155 4.155 8 N -0.584 5.584 9 C 0.177 3.823 10 C -0.258 4.258 11 H 0.068 0.932 12 C 0.003 3.997 13 N -0.900 5.900 14 Si 0.904 3.096 15 H -0.288 1.288 16 H -0.292 1.292 17 H -0.280 1.280 18 C -0.082 4.082 19 C -0.057 4.057 20 O -0.215 6.215 21 H 0.083 0.917 22 H 0.079 0.921 23 H 0.097 0.903 24 H 0.057 0.943 25 H 0.040 0.960 26 H 0.054 0.946 27 H 0.034 0.966 28 H 0.032 0.968 29 H 0.002 0.998 30 H 0.251 0.749 31 H 0.077 0.923 32 H 0.068 0.932 33 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.343 -8.414 -7.985 11.834 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.105 4.105 2 C -0.047 4.047 3 N -0.178 5.178 4 C -0.111 4.111 5 C 0.134 3.866 6 H 0.093 0.907 7 C -0.214 4.214 8 N -0.304 5.304 9 C 0.032 3.968 10 C -0.388 4.388 11 H 0.086 0.914 12 C -0.196 4.196 13 N -0.545 5.545 14 Si 0.734 3.266 15 H -0.215 1.215 16 H -0.218 1.218 17 H -0.205 1.205 18 C -0.135 4.135 19 C -0.114 4.114 20 O -0.103 6.103 21 H 0.102 0.898 22 H 0.098 0.902 23 H 0.116 0.884 24 H 0.076 0.924 25 H 0.059 0.941 26 H 0.074 0.926 27 H 0.053 0.947 28 H 0.050 0.950 29 H 0.021 0.979 30 H 0.061 0.939 31 H 0.096 0.904 32 H 0.087 0.913 33 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -2.678 -7.718 -7.813 11.304 hybrid contribution 0.704 -0.465 0.978 1.292 sum -1.973 -8.183 -6.834 10.843 Atomic orbital electron populations 1.20086 0.82193 1.04541 1.03683 1.26168 0.96202 0.79199 1.03121 1.70420 1.01979 1.29328 1.16071 1.22935 0.94483 0.92052 1.01613 1.18879 0.89719 0.87562 0.90484 0.90717 1.22220 1.01863 1.00253 0.97107 1.43978 1.30458 1.28623 1.27385 1.20662 0.89747 0.92240 0.94119 1.19260 0.92036 1.34830 0.92655 0.91417 1.25096 0.95680 1.01830 0.96963 1.70121 1.13229 1.44730 1.26375 0.86263 0.80640 0.78544 0.81119 1.21471 1.21842 1.20517 1.23056 0.83461 0.95295 1.11657 1.20118 0.90479 0.97504 1.03257 1.84241 1.16815 1.37941 1.71336 0.89798 0.90217 0.88416 0.92361 0.94052 0.92649 0.94724 0.94958 0.97921 0.93885 0.90419 0.91337 0.89396 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 -0.61 10.51 36.00 0.38 -0.23 16 2 C 0.16 2.98 8.34 -12.95 -0.11 2.88 16 3 N -0.45 -9.94 9.71 -7.36 -0.07 -10.02 16 4 C 0.01 0.27 5.86 -82.81 -0.49 -0.22 16 5 C 0.24 5.38 3.02 -69.08 -0.21 5.17 16 6 H 0.07 1.57 6.89 -51.93 -0.36 1.21 16 7 C -0.16 -2.94 9.16 37.16 0.34 -2.60 16 8 N -0.58 -15.55 2.80 -174.80 -0.49 -16.04 16 9 C 0.18 4.76 7.37 59.85 0.44 5.21 16 10 C -0.26 -7.33 9.58 -15.06 -0.14 -7.48 16 11 H 0.07 1.84 7.82 -52.49 -0.41 1.43 16 12 C 0.00 0.09 5.13 -17.43 -0.09 0.00 16 13 N -0.90 -27.44 10.66 55.49 0.59 -26.85 16 14 Si 0.90 22.38 29.57 -169.99 -5.03 17.35 16 15 H -0.29 -7.08 7.11 56.52 0.40 -6.68 16 16 H -0.29 -7.31 7.11 56.52 0.40 -6.90 16 17 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 18 C -0.08 -1.56 7.39 -35.69 -0.26 -1.82 16 19 C -0.06 -0.80 9.99 36.00 0.36 -0.44 16 20 O -0.21 -4.05 10.78 5.38 0.06 -3.99 16 21 H 0.08 0.87 8.14 -51.93 -0.42 0.44 16 22 H 0.08 0.84 8.14 -51.92 -0.42 0.42 16 23 H 0.10 1.25 8.14 -51.93 -0.42 0.82 16 24 H 0.06 1.07 8.14 -51.93 -0.42 0.65 16 25 H 0.04 0.66 8.14 -51.93 -0.42 0.24 16 26 H 0.05 1.11 6.66 -51.93 -0.35 0.76 16 27 H 0.03 1.03 7.11 -51.93 -0.37 0.66 16 28 H 0.03 0.92 7.29 -51.93 -0.38 0.54 16 29 H 0.00 0.06 6.41 -51.93 -0.33 -0.28 16 30 H 0.25 7.39 8.31 -40.82 -0.34 7.05 16 31 H 0.08 1.07 8.14 -51.92 -0.42 0.64 16 32 H 0.07 0.79 8.14 -51.93 -0.42 0.37 16 33 H 0.09 1.10 7.46 -51.93 -0.39 0.72 16 LS Contribution 276.14 15.07 4.16 4.16 Total: -1.00 -33.88 276.14 -5.23 -39.11 By element: Atomic # 1 Polarization: 0.47 SS G_CDS: -4.68 Total: -4.21 kcal Atomic # 6 Polarization: 0.26 SS G_CDS: 0.22 Total: 0.48 kcal Atomic # 7 Polarization: -52.93 SS G_CDS: 0.03 Total: -52.90 kcal Atomic # 8 Polarization: -4.05 SS G_CDS: 0.06 Total: -3.99 kcal Atomic # 14 Polarization: 22.38 SS G_CDS: -5.03 Total: 17.35 kcal Total LS contribution 4.16 Total: 4.16 kcal Total: -33.88 -5.23 -39.11 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260034331.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.672 kcal (2) G-P(sol) polarization free energy of solvation -33.880 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.792 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.232 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.112 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.560 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds