Wall clock time and date at job start Mon Mar 30 2020 03:12:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53008 * 109.47307 * 2 1 4 4 N 1.46501 * 109.47705 * 120.00189 * 2 1 3 5 5 C 1.38159 * 120.00384 * 123.42018 * 4 2 1 6 6 N 1.31046 * 125.71157 * 179.97438 * 5 4 2 7 7 C 1.34726 * 108.60221 * 180.02562 * 6 5 4 8 8 C 1.34093 * 107.79446 * 359.97438 * 7 6 5 9 9 O 1.34210 * 125.70809 * 0.02562 * 5 4 2 10 10 C 1.46502 * 119.99807 * 303.42939 * 4 2 1 11 11 H 1.09004 * 109.47225 * 357.57848 * 10 4 2 12 12 C 1.53001 * 109.47506 * 117.58294 * 10 4 2 13 13 C 1.50696 * 109.47082 * 237.58623 * 10 4 2 14 14 H 1.08005 * 119.99934 * 354.63027 * 13 10 4 15 15 C 1.37882 * 120.00592 * 174.63085 * 13 10 4 16 16 N 1.31511 * 120.00441 * 179.97438 * 15 13 10 17 17 Si 1.86800 * 119.99311 * 359.97438 * 15 13 10 18 18 H 1.48506 * 109.46975 * 90.00142 * 17 15 13 19 19 H 1.48507 * 109.46864 * 209.99627 * 17 15 13 20 20 H 1.48494 * 109.47531 * 329.99821 * 17 15 13 21 21 H 1.09008 * 109.46652 * 305.86080 * 1 2 3 22 22 H 1.08996 * 109.47098 * 65.86269 * 1 2 3 23 23 H 1.08998 * 109.47251 * 185.86836 * 1 2 3 24 24 H 1.09002 * 109.47486 * 240.00127 * 2 1 3 25 25 H 1.08999 * 109.47007 * 183.98209 * 3 2 1 26 26 H 1.09001 * 109.46806 * 303.98448 * 3 2 1 27 27 H 1.09002 * 109.46603 * 63.98332 * 3 2 1 28 28 H 1.08004 * 126.10569 * 180.02562 * 7 6 5 29 29 H 1.07997 * 126.35901 * 180.02562 * 8 7 6 30 30 H 1.08990 * 109.46644 * 57.13504 * 12 10 4 31 31 H 1.09002 * 109.46938 * 177.13699 * 12 10 4 32 32 H 1.08997 * 109.47028 * 297.13220 * 12 10 4 33 33 H 0.96995 * 120.00083 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4426 0.0000 4 7 2.0185 -0.6906 1.1961 5 6 2.8701 -1.7713 1.0706 6 7 3.3729 -2.4679 2.0601 7 6 4.1554 -3.4381 1.5486 8 6 4.1256 -3.3268 0.2126 9 8 3.3216 -2.2826 -0.0852 10 6 1.6037 -0.2355 2.5254 11 1 0.9719 0.6473 2.4265 12 6 0.8197 -1.3482 3.2240 13 6 2.8229 0.1086 3.3416 14 1 3.8094 -0.0823 2.9455 15 6 2.6792 0.6669 4.5941 16 7 3.7431 0.9667 5.3065 17 14 0.9730 0.9976 5.2789 18 1 0.5009 -0.1943 6.0285 19 1 1.0242 2.1680 6.1915 20 1 0.0375 1.2819 4.1612 21 1 -0.3633 0.6021 0.8329 22 1 -0.3633 0.4202 -0.9378 23 1 -0.3634 -1.0223 0.1051 24 1 1.8934 -0.5138 -0.8900 25 1 3.1277 1.4433 -0.0714 26 1 1.6196 1.9766 -0.8521 27 1 1.7362 1.9353 0.9236 28 1 4.7074 -4.1746 2.1137 29 1 4.6478 -3.9548 -0.4939 30 1 1.4340 -2.2469 3.2774 31 1 0.5549 -1.0285 4.2319 32 1 -0.0885 -1.5617 2.6603 33 1 3.6420 1.3591 6.1878 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260149369.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:12:45 Heat of formation + Delta-G solvation = 44.751378 kcal Electronic energy + Delta-G solvation = -16296.547727 eV Core-core repulsion = 13746.116132 eV Total energy + Delta-G solvation = -2550.431595 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 224.127 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -42.26806 -37.66751 -34.06178 -33.12197 -31.66589 -30.02220 -27.46491 -26.87263 -24.96198 -22.38343 -21.79251 -20.90495 -19.00301 -17.49837 -16.25115 -15.82632 -15.35288 -15.11004 -14.21505 -13.63783 -13.51268 -13.23243 -12.66326 -12.35785 -12.18592 -12.05817 -11.88475 -11.56388 -11.29029 -10.89813 -10.79547 -10.58503 -10.32645 -9.99528 -9.66982 -9.42861 -9.16901 -8.87991 -8.50397 -6.76045 -5.99487 -3.96333 2.44385 2.89837 3.28944 3.34646 3.38742 3.79996 4.13099 4.42320 5.10678 5.29667 5.41434 5.49033 5.57031 5.72324 5.85917 5.97533 6.01224 6.14375 6.20134 6.32624 6.48341 6.52793 6.61969 6.67316 6.70565 6.79680 6.99872 7.34803 7.62397 7.69878 8.20478 8.58135 8.95443 9.12499 9.59512 11.14407 Molecular weight = 224.13amu Principal moments of inertia in cm(-1) A = 0.024635 B = 0.012455 C = 0.009900 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1136.332602 B = 2247.465302 C = 2827.473681 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.161 4.161 2 C 0.147 3.853 3 C -0.160 4.160 4 N -0.550 5.550 5 C 0.476 3.524 6 N -0.511 5.511 7 C -0.007 4.007 8 C -0.156 4.156 9 O -0.245 6.245 10 C 0.263 3.737 11 H 0.052 0.948 12 C -0.169 4.169 13 C -0.501 4.501 14 H 0.082 0.918 15 C 0.073 3.927 16 N -0.898 5.898 17 Si 0.874 3.126 18 H -0.276 1.276 19 H -0.294 1.294 20 H -0.267 1.267 21 H 0.063 0.937 22 H 0.063 0.937 23 H 0.057 0.943 24 H 0.079 0.921 25 H 0.058 0.942 26 H 0.057 0.943 27 H 0.070 0.930 28 H 0.170 0.830 29 H 0.200 0.800 30 H 0.076 0.924 31 H 0.049 0.951 32 H 0.023 0.977 33 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.869 -3.763 -10.714 12.355 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.220 4.220 2 C 0.043 3.957 3 C -0.219 4.219 4 N -0.276 5.276 5 C 0.179 3.821 6 N -0.248 5.248 7 C -0.146 4.146 8 C -0.228 4.228 9 O -0.134 6.134 10 C 0.163 3.837 11 H 0.070 0.930 12 C -0.227 4.227 13 C -0.539 4.539 14 H 0.100 0.900 15 C -0.129 4.129 16 N -0.536 5.536 17 Si 0.704 3.296 18 H -0.203 1.203 19 H -0.221 1.221 20 H -0.192 1.192 21 H 0.082 0.918 22 H 0.081 0.919 23 H 0.076 0.924 24 H 0.097 0.903 25 H 0.077 0.923 26 H 0.076 0.924 27 H 0.089 0.911 28 H 0.187 0.813 29 H 0.217 0.783 30 H 0.095 0.905 31 H 0.068 0.932 32 H 0.042 0.958 33 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -5.013 -3.444 -9.941 11.654 hybrid contribution -0.512 -0.097 -0.161 0.546 sum -5.525 -3.541 -10.102 12.047 Atomic orbital electron populations 1.22208 0.95277 1.02376 1.02092 1.20945 0.93944 0.93581 0.87267 1.22178 1.01800 0.95560 1.02334 1.46117 1.46581 1.27177 1.07767 1.21882 0.91474 0.90480 0.78294 1.71277 1.16763 1.08955 1.27807 1.23192 1.00230 0.99003 0.92164 1.24119 1.04814 0.95734 0.98090 1.84328 1.53171 1.40361 1.35549 1.19181 0.95357 0.92010 0.77124 0.93048 1.22555 0.98413 1.02572 0.99205 1.21155 0.92986 1.39346 1.00443 0.89960 1.24820 0.96085 0.95452 0.96521 1.69877 1.28413 1.43614 1.11732 0.87060 0.85683 0.77413 0.79471 1.20293 1.22118 1.19241 0.91792 0.91855 0.92406 0.90268 0.92265 0.92371 0.91111 0.81251 0.78346 0.90531 0.93243 0.95769 0.92751 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.28 9.03 37.16 0.34 -1.94 16 2 C 0.15 2.45 3.27 -67.93 -0.22 2.23 16 3 C -0.16 -2.55 9.29 37.16 0.35 -2.21 16 4 N -0.55 -11.59 2.38 -162.19 -0.39 -11.97 16 5 C 0.48 10.46 7.52 -87.00 -0.65 9.80 16 6 N -0.51 -11.88 8.34 -14.45 -0.12 -12.00 16 7 C -0.01 -0.12 11.88 -17.74 -0.21 -0.33 16 8 C -0.16 -2.59 12.17 29.27 0.36 -2.24 16 9 O -0.24 -4.77 9.93 3.69 0.04 -4.73 16 10 C 0.26 6.17 1.35 -69.08 -0.09 6.08 16 11 H 0.05 1.18 4.78 -51.93 -0.25 0.93 16 12 C -0.17 -3.83 8.80 37.16 0.33 -3.51 16 13 C -0.50 -14.07 8.27 -34.44 -0.28 -14.36 16 14 H 0.08 2.63 7.41 -52.48 -0.39 2.24 16 15 C 0.07 2.09 5.45 -17.82 -0.10 1.99 16 16 N -0.90 -27.69 13.96 55.43 0.77 -26.92 16 17 Si 0.87 21.43 24.67 -169.99 -4.19 17.24 16 18 H -0.28 -6.72 6.86 56.52 0.39 -6.33 16 19 H -0.29 -7.23 7.11 56.52 0.40 -6.82 16 20 H -0.27 -6.08 6.39 56.52 0.36 -5.72 16 21 H 0.06 0.95 7.12 -51.92 -0.37 0.58 16 22 H 0.06 0.71 8.14 -51.93 -0.42 0.28 16 23 H 0.06 0.83 8.14 -51.93 -0.42 0.40 16 24 H 0.08 1.24 7.23 -51.93 -0.38 0.87 16 25 H 0.06 1.01 8.14 -51.93 -0.42 0.59 16 26 H 0.06 0.73 8.14 -51.93 -0.42 0.30 16 27 H 0.07 1.24 7.08 -51.93 -0.37 0.88 16 28 H 0.17 2.60 8.06 -52.48 -0.42 2.18 16 29 H 0.20 2.32 8.06 -52.49 -0.42 1.90 16 30 H 0.08 1.84 6.37 -51.93 -0.33 1.51 16 31 H 0.05 1.15 3.98 -51.93 -0.21 0.94 16 32 H 0.02 0.47 8.14 -51.93 -0.42 0.05 16 33 H 0.26 7.61 8.31 -40.82 -0.34 7.27 16 LS Contribution 265.79 15.07 4.01 4.01 Total: -1.00 -32.29 265.79 -4.52 -36.81 By element: Atomic # 1 Polarization: 6.48 SS G_CDS: -4.44 Total: 2.05 kcal Atomic # 6 Polarization: -4.29 SS G_CDS: -0.20 Total: -4.49 kcal Atomic # 7 Polarization: -51.16 SS G_CDS: 0.27 Total: -50.89 kcal Atomic # 8 Polarization: -4.77 SS G_CDS: 0.04 Total: -4.73 kcal Atomic # 14 Polarization: 21.43 SS G_CDS: -4.19 Total: 17.24 kcal Total LS contribution 4.01 Total: 4.01 kcal Total: -32.29 -4.52 -36.81 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260149369.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.566 kcal (2) G-P(sol) polarization free energy of solvation -32.294 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.271 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.520 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.814 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.751 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds