Wall clock time and date at job start Mon Mar 30 2020 03:10:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 H 1.08998 * 109.71708 * 2 1 4 4 C 1.52994 * 109.71702 * 239.34675 * 2 1 3 5 5 N 1.45650 * 110.76818 * 193.60061 * 4 2 1 6 6 C 1.46503 * 117.70035 * 201.89958 * 5 4 2 7 7 C 1.53000 * 117.50051 * 7.53691 * 6 5 4 8 8 C 1.53000 * 117.49946 * 298.87913 * 6 5 4 9 9 C 1.33372 * 124.59534 * 21.87593 * 5 4 2 10 10 O 1.21280 * 118.49434 * 175.69853 * 9 5 4 11 11 C 1.50809 * 123.03417 * 355.52804 * 9 5 4 12 12 N 1.47052 * 108.69023 * 13.00362 * 11 9 5 13 13 C 1.36937 * 121.35139 * 137.21651 * 12 11 9 14 14 H 1.08002 * 119.99992 * 204.58350 * 13 12 11 15 15 C 1.38818 * 120.00059 * 24.57812 * 13 12 11 16 16 N 1.31617 * 119.99768 * 30.18239 * 15 13 12 17 17 Si 1.86798 * 119.99971 * 210.45774 * 15 13 12 18 18 H 1.48497 * 109.47043 * 179.72588 * 17 15 13 19 19 H 1.48497 * 109.47281 * 299.72693 * 17 15 13 20 20 H 1.48503 * 109.47306 * 59.72345 * 17 15 13 21 21 H 1.09000 * 109.47084 * 299.38695 * 1 2 3 22 22 H 1.09005 * 109.47125 * 59.38933 * 1 2 3 23 23 H 1.09006 * 109.47147 * 179.38650 * 1 2 3 24 24 H 1.08999 * 109.22002 * 313.93393 * 4 2 1 25 25 H 1.09004 * 109.21648 * 73.27074 * 4 2 1 26 26 H 1.09001 * 115.54781 * 153.20732 * 6 5 4 27 27 H 1.09003 * 117.49976 * 0.02562 * 7 6 5 28 28 H 1.09003 * 117.49945 * 145.01890 * 7 6 5 29 29 H 1.09004 * 117.49676 * 214.98256 * 8 6 5 30 30 H 1.08998 * 117.50069 * 359.97438 * 8 6 5 31 31 H 1.08993 * 109.72351 * 253.20894 * 11 9 5 32 32 H 1.08995 * 109.60445 * 132.72764 * 11 9 5 33 33 H 0.96999 * 120.00017 * 6.01316 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8977 1.0261 0.0000 4 6 2.0462 -0.7343 -1.2390 5 7 3.4665 -1.0300 -1.1098 6 6 4.2268 -1.2693 -2.3390 7 6 3.5155 -1.0178 -3.6700 8 6 3.8022 -2.4505 -3.2138 9 6 4.1235 -1.0978 0.0489 10 8 5.2898 -1.4301 0.0341 11 6 3.4842 -0.7767 1.3765 12 7 2.0269 -0.7060 1.1930 13 6 1.1667 -1.2687 2.0977 14 1 0.1749 -1.5638 1.7885 15 6 1.5696 -1.4599 3.4124 16 7 2.4431 -0.6408 3.9587 17 14 0.8779 -2.8841 4.4035 18 1 1.4681 -2.8718 5.7661 19 1 -0.5976 -2.7483 4.5019 20 1 1.2132 -4.1647 3.7304 21 1 -0.3633 0.5043 0.8954 22 1 -0.3634 0.5233 -0.8845 23 1 -0.3634 -1.0277 -0.0110 24 1 1.4950 -1.6670 -1.3589 25 1 1.8883 -0.1094 -2.1181 26 1 5.2910 -1.0393 -2.2857 27 1 2.4819 -0.6739 -3.6312 28 1 4.1117 -0.6227 -4.4926 29 1 4.5869 -2.9975 -3.7363 30 1 2.9573 -3.0498 -2.8746 31 1 3.8533 0.1822 1.7401 32 1 3.7240 -1.5590 2.0966 33 1 2.7394 0.1457 3.4743 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261094772.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:10:49 Heat of formation + Delta-G solvation = 22.446472 kcal Electronic energy + Delta-G solvation = -16170.755789 eV Core-core repulsion = 13619.356981 eV Total energy + Delta-G solvation = -2551.398809 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 224.127 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -39.99151 -36.92124 -36.56398 -33.40122 -31.69875 -30.09099 -26.74430 -25.94122 -23.34227 -22.45360 -21.85152 -20.51824 -18.20251 -17.07300 -16.52290 -16.37803 -15.05891 -14.69479 -14.40439 -13.70137 -13.56882 -13.48931 -13.11358 -12.45619 -12.19341 -11.61542 -11.53958 -11.25808 -10.98148 -10.76704 -10.69540 -10.59818 -10.50572 -10.34990 -10.05464 -9.67716 -9.18424 -8.42955 -8.11722 -7.11468 -6.20760 -3.32548 3.18272 3.34329 3.45609 3.52492 3.68733 3.98880 4.46497 4.84157 4.91485 5.00714 5.06057 5.22838 5.28992 5.48236 5.61993 5.70153 5.75326 5.87372 5.99991 6.07995 6.15201 6.18279 6.23886 6.45243 6.61562 6.74405 6.84751 6.96157 7.81146 7.98011 8.37981 8.72204 8.92375 9.68747 10.09682 11.08052 Molecular weight = 224.13amu Principal moments of inertia in cm(-1) A = 0.034103 B = 0.009311 C = 0.008444 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 820.842706 B = 3006.445448 C = 3315.143741 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C 0.153 3.847 3 H 0.036 0.964 4 C 0.101 3.899 5 N -0.573 5.573 6 C 0.075 3.925 7 C -0.191 4.191 8 C -0.193 4.193 9 C 0.510 3.490 10 O -0.569 6.569 11 C 0.146 3.854 12 N -0.593 5.593 13 C -0.360 4.360 14 H 0.069 0.931 15 C -0.018 4.018 16 N -0.903 5.903 17 Si 1.059 2.941 18 H -0.285 1.285 19 H -0.291 1.291 20 H -0.292 1.292 21 H 0.067 0.933 22 H 0.043 0.957 23 H 0.060 0.940 24 H 0.058 0.942 25 H 0.067 0.933 26 H 0.129 0.871 27 H 0.101 0.899 28 H 0.099 0.901 29 H 0.097 0.903 30 H 0.095 0.905 31 H 0.058 0.942 32 H 0.106 0.894 33 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.906 0.498 -12.229 12.387 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 C 0.046 3.954 3 H 0.054 0.946 4 C -0.024 4.024 5 N -0.304 5.304 6 C -0.030 4.030 7 C -0.229 4.229 8 C -0.232 4.232 9 C 0.299 3.701 10 O -0.448 6.448 11 C 0.018 3.982 12 N -0.319 5.319 13 C -0.488 4.488 14 H 0.087 0.913 15 C -0.221 4.221 16 N -0.542 5.542 17 Si 0.888 3.112 18 H -0.210 1.210 19 H -0.218 1.218 20 H -0.220 1.220 21 H 0.086 0.914 22 H 0.062 0.938 23 H 0.079 0.921 24 H 0.077 0.923 25 H 0.085 0.915 26 H 0.146 0.854 27 H 0.119 0.881 28 H 0.118 0.882 29 H 0.115 0.885 30 H 0.113 0.887 31 H 0.076 0.924 32 H 0.124 0.876 33 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -1.256 -0.464 -10.678 10.761 hybrid contribution -0.193 0.787 -1.624 1.814 sum -1.450 0.323 -12.301 12.390 Atomic orbital electron populations 1.21694 0.94094 1.02114 1.00857 1.20768 0.94425 0.93593 0.86595 0.94590 1.22166 0.79987 1.00143 1.00106 1.46792 1.09444 1.69390 1.04754 1.21698 0.96862 1.02084 0.82339 1.23355 1.02296 0.99752 0.97503 1.23309 1.04051 0.91491 1.04333 1.21770 0.86465 0.75277 0.86538 1.90609 1.17854 1.48756 1.87570 1.21180 0.84298 1.01854 0.90865 1.44387 1.00172 1.62987 1.24374 1.19868 0.99066 1.39102 0.90719 0.91315 1.25868 0.99853 1.02400 0.94015 1.70823 1.34030 1.11528 1.37794 0.83615 0.75354 0.75976 0.76213 1.21005 1.21837 1.21957 0.91393 0.93760 0.92146 0.92325 0.91478 0.85384 0.88120 0.88223 0.88476 0.88683 0.92444 0.87608 0.92081 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.21 7.98 37.16 0.30 -1.92 16 2 C 0.15 2.96 3.55 -67.52 -0.24 2.72 16 3 H 0.04 0.70 8.14 -51.93 -0.42 0.28 16 4 C 0.10 1.70 5.22 -4.50 -0.02 1.68 16 5 N -0.57 -10.84 3.14 -167.13 -0.53 -11.37 16 6 C 0.08 1.20 5.98 -67.93 -0.41 0.79 16 7 C -0.19 -2.27 9.70 -26.70 -0.26 -2.53 16 8 C -0.19 -2.57 10.28 -26.70 -0.27 -2.85 16 9 C 0.51 11.51 7.59 -11.56 -0.09 11.42 16 10 O -0.57 -13.99 16.38 5.56 0.09 -13.89 16 11 C 0.15 3.54 4.94 -4.84 -0.02 3.52 16 12 N -0.59 -14.15 2.88 -165.95 -0.48 -14.62 16 13 C -0.36 -9.38 8.59 -15.06 -0.13 -9.51 16 14 H 0.07 1.76 6.33 -52.49 -0.33 1.43 16 15 C -0.02 -0.49 4.60 -17.43 -0.08 -0.57 16 16 N -0.90 -26.22 12.63 55.49 0.70 -25.52 16 17 Si 1.06 24.56 30.01 -169.99 -5.10 19.46 16 18 H -0.28 -6.76 7.11 56.52 0.40 -6.35 16 19 H -0.29 -6.41 7.11 56.52 0.40 -6.01 16 20 H -0.29 -6.66 7.11 56.52 0.40 -6.26 16 21 H 0.07 1.27 7.87 -51.93 -0.41 0.86 16 22 H 0.04 0.60 8.14 -51.93 -0.42 0.17 16 23 H 0.06 1.06 7.19 -51.93 -0.37 0.69 16 24 H 0.06 1.01 8.06 -51.93 -0.42 0.59 16 25 H 0.07 0.93 5.98 -51.93 -0.31 0.62 16 26 H 0.13 2.13 7.51 -51.93 -0.39 1.74 16 27 H 0.10 1.14 6.01 -51.93 -0.31 0.83 16 28 H 0.10 0.98 8.14 -51.93 -0.42 0.56 16 29 H 0.10 1.14 8.14 -51.93 -0.42 0.72 16 30 H 0.09 1.33 8.14 -51.93 -0.42 0.91 16 31 H 0.06 1.41 7.54 -51.93 -0.39 1.02 16 32 H 0.11 2.86 6.92 -51.93 -0.36 2.50 16 33 H 0.27 7.83 6.85 -40.82 -0.28 7.55 16 LS Contribution 265.77 15.07 4.01 4.01 Total: -1.00 -30.35 265.77 -7.02 -37.37 By element: Atomic # 1 Polarization: 6.31 SS G_CDS: -4.49 Total: 1.83 kcal Atomic # 6 Polarization: 3.98 SS G_CDS: -1.23 Total: 2.75 kcal Atomic # 7 Polarization: -51.21 SS G_CDS: -0.30 Total: -51.51 kcal Atomic # 8 Polarization: -13.99 SS G_CDS: 0.09 Total: -13.89 kcal Atomic # 14 Polarization: 24.56 SS G_CDS: -5.10 Total: 19.46 kcal Total LS contribution 4.01 Total: 4.01 kcal Total: -30.35 -7.02 -37.37 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261094772.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 59.812 kcal (2) G-P(sol) polarization free energy of solvation -30.345 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.466 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.020 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.365 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.446 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds