Wall clock time and date at job start Mon Mar 30 2020 02:46:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.47195 * 179.97438 * 2 1 4 4 C 1.52997 * 109.47553 * 249.03694 * 3 2 1 5 5 N 1.46495 * 109.47499 * 180.02562 * 4 3 2 6 6 C 1.35716 * 126.53062 * 269.68761 * 5 4 3 7 7 Cl 1.73590 * 125.25314 * 359.97438 * 6 5 4 8 8 N 1.31199 * 109.49526 * 179.81867 * 6 5 4 9 9 C 1.32984 * 110.02425 * 0.45516 * 8 6 5 10 10 C 1.38541 * 126.53946 * 89.99664 * 5 4 3 11 11 C 1.40032 * 127.02793 * 359.97438 * 10 5 4 12 12 H 1.07997 * 120.00304 * 341.21918 * 11 10 5 13 13 C 1.40048 * 119.99695 * 161.22006 * 11 10 5 14 14 N 1.30874 * 119.99604 * 164.64167 * 13 11 10 15 15 Si 1.86800 * 119.99852 * 344.64054 * 13 11 10 16 16 H 1.48500 * 109.47127 * 90.63739 * 15 13 11 17 17 H 1.48508 * 109.46746 * 210.63546 * 15 13 11 18 18 H 1.48500 * 109.47139 * 330.63243 * 15 13 11 19 19 H 1.08998 * 109.47266 * 9.03991 * 3 2 1 20 20 H 1.09001 * 109.46913 * 129.03672 * 3 2 1 21 21 H 1.09003 * 109.46822 * 300.00023 * 4 3 2 22 22 H 1.09004 * 109.47287 * 59.99330 * 4 3 2 23 23 H 1.08004 * 126.19699 * 179.75998 * 9 8 6 24 24 H 0.97004 * 119.99693 * 180.02562 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1178 0.5169 1.3470 5 7 4.5828 0.5182 1.3467 6 6 5.3916 -0.4974 1.7421 7 17 4.8503 -2.0343 2.3409 8 7 6.6457 -0.1396 1.5989 9 6 6.7139 1.1007 1.1239 10 6 5.4067 1.5583 0.9485 11 6 5.0094 2.8121 0.4676 12 1 4.0073 2.9531 0.0906 13 6 5.9117 3.8831 0.4758 14 7 5.6616 4.9548 -0.2326 15 14 7.4722 3.7820 1.4976 16 1 8.5666 3.2075 0.6745 17 1 7.8560 5.1431 1.9510 18 1 7.2345 2.9152 2.6797 19 1 2.9718 -1.0140 -0.1615 20 1 2.9710 0.6481 -0.7982 21 1 2.7541 1.5317 1.5084 22 1 2.7547 -0.1304 2.1453 23 1 7.6171 1.6536 0.9117 24 1 6.2867 5.6965 -0.2273 RHF calculation, no. of doubly occupied orbitals= 37 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000521402133.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:46:38 Heat of formation + Delta-G solvation = 66.194118 kcal Electronic energy + Delta-G solvation = -12833.713518 eV Core-core repulsion = 10387.828814 eV Total energy + Delta-G solvation = -2445.884704 eV No. of doubly occupied orbitals = 37 Molecular weight (most abundant/longest-lived isotopes) = 225.036 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -40.50320 -36.80970 -36.02982 -34.14356 -33.78441 -30.27935 -29.46910 -24.67343 -24.14065 -20.94202 -19.45695 -17.74927 -17.22528 -16.36510 -15.21098 -14.75032 -14.51360 -13.93266 -13.51112 -13.30693 -12.70557 -12.64308 -12.09623 -11.98493 -11.78428 -11.29478 -11.12162 -10.92307 -10.75806 -10.59248 -9.97273 -9.50136 -8.86934 -8.70509 -7.45879 -7.11599 -4.64997 2.38693 2.65055 2.84701 2.85988 3.11379 3.20328 3.33189 3.69032 3.89942 4.05073 4.34306 4.89119 5.00244 5.14716 5.46653 5.75777 5.96318 6.06844 6.57276 6.86445 7.06580 7.51168 7.59735 7.93692 8.02387 8.33866 8.52231 9.16920 9.89440 Molecular weight = 225.04amu Principal moments of inertia in cm(-1) A = 0.023600 B = 0.011364 C = 0.007909 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1186.170332 B = 2463.349992 C = 3539.589566 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.443 5.443 2 C 0.220 3.780 3 C -0.047 4.047 4 C 0.130 3.870 5 N -0.484 5.484 6 C 0.133 3.867 7 Cl -0.024 7.024 8 N -0.431 5.431 9 C -0.191 4.191 10 C 0.207 3.793 11 C -0.436 4.436 12 H 0.093 0.907 13 C 0.098 3.902 14 N -0.800 5.800 15 Si 0.914 3.086 16 H -0.264 1.264 17 H -0.292 1.292 18 H -0.241 1.241 19 H 0.111 0.889 20 H 0.121 0.879 21 H 0.099 0.901 22 H 0.087 0.913 23 H 0.152 0.848 24 H 0.291 0.709 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.493 -5.096 1.821 5.614 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.121 5.121 2 C -0.098 4.098 3 C -0.088 4.088 4 C 0.004 3.996 5 N -0.181 5.181 6 C -0.144 4.144 7 Cl 0.003 6.997 8 N -0.150 5.150 9 C -0.338 4.338 10 C 0.095 3.905 11 C -0.470 4.470 12 H 0.111 0.889 13 C -0.124 4.124 14 N -0.425 5.425 15 Si 0.740 3.260 16 H -0.191 1.191 17 H -0.219 1.219 18 H -0.164 1.164 19 H 0.129 0.871 20 H 0.139 0.861 21 H 0.117 0.883 22 H 0.105 0.895 23 H 0.169 0.831 24 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -2.635 -5.567 1.991 6.473 hybrid contribution 0.336 0.410 0.092 0.538 sum -2.298 -5.157 2.084 6.018 Atomic orbital electron populations 1.81195 1.12898 1.09349 1.08630 1.28982 0.94953 0.92767 0.93134 1.19761 0.81520 1.05745 1.01782 1.21244 0.79145 1.03852 0.95355 1.44852 1.04502 1.13794 1.54996 1.21943 0.86367 0.87041 1.19022 1.98274 1.89224 1.25247 1.86935 1.69124 1.16533 1.14335 1.15029 1.21997 0.95219 0.93644 1.22959 1.18961 0.88584 0.88005 0.94946 1.18223 1.01558 0.90789 1.36447 0.88886 1.25820 0.99345 0.93888 0.93306 1.69602 1.36864 1.05630 1.30382 0.86322 0.80356 0.76780 0.82509 1.19062 1.21939 1.16432 0.87092 0.86149 0.88319 0.89512 0.83078 0.89862 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -7.11 18.54 42.15 0.78 -6.33 14 2 C 0.22 3.03 15.43 -20.76 -0.32 2.71 14 3 C -0.05 -0.60 6.03 -29.52 -0.18 -0.78 14 4 C 0.13 1.97 5.77 -4.05 -0.02 1.94 14 5 N -0.48 -9.59 2.82 -111.91 -0.32 -9.91 14 6 C 0.13 2.75 8.50 -89.17 -0.76 1.99 14 7 Cl -0.02 -0.40 28.75 -51.86 -1.49 -1.89 14 8 N -0.43 -10.16 11.18 -10.55 -0.12 -10.28 14 9 C -0.19 -4.56 9.25 -16.54 -0.15 -4.71 14 10 C 0.21 4.72 6.30 -83.65 -0.53 4.19 14 11 C -0.44 -10.28 9.45 -38.23 -0.36 -10.65 14 12 H 0.09 2.20 7.94 -52.49 -0.42 1.79 14 13 C 0.10 2.33 5.51 -17.28 -0.10 2.23 14 14 N -0.80 -19.33 13.93 55.56 0.77 -18.55 14 15 Si 0.91 19.39 24.53 -169.99 -4.17 15.22 14 16 H -0.26 -5.53 6.68 56.52 0.38 -5.15 14 17 H -0.29 -5.99 7.11 56.52 0.40 -5.58 14 18 H -0.24 -5.39 6.56 56.52 0.37 -5.02 14 19 H 0.11 1.31 8.14 -51.93 -0.42 0.88 14 20 H 0.12 1.59 8.14 -51.93 -0.42 1.17 14 21 H 0.10 1.50 7.81 -51.93 -0.41 1.09 14 22 H 0.09 1.17 7.79 -51.93 -0.40 0.77 14 23 H 0.15 3.56 4.21 -52.48 -0.22 3.34 14 24 H 0.29 6.39 8.30 -40.82 -0.34 6.05 14 LS Contribution 238.68 15.07 3.60 3.60 Total: -1.00 -27.02 238.68 -4.84 -31.86 By element: Atomic # 1 Polarization: 0.83 SS G_CDS: -1.48 Total: -0.66 kcal Atomic # 6 Polarization: -0.65 SS G_CDS: -2.42 Total: -3.06 kcal Atomic # 7 Polarization: -46.19 SS G_CDS: 1.12 Total: -45.07 kcal Atomic # 14 Polarization: 19.39 SS G_CDS: -4.17 Total: 15.22 kcal Atomic # 17 Polarization: -0.40 SS G_CDS: -1.49 Total: -1.89 kcal Total LS contribution 3.60 Total: 3.60 kcal Total: -27.02 -4.84 -31.86 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000521402133.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 98.054 kcal (2) G-P(sol) polarization free energy of solvation -27.019 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.035 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.841 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.860 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.194 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds