Wall clock time and date at job start Mon Mar 30 2020 02:45:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.38222 * 120.84870 * 2 1 4 4 C 1.38607 * 119.31475 * 179.77953 * 3 2 1 5 5 Cl 1.73593 * 119.46583 * 180.25879 * 4 3 2 6 6 N 1.32111 * 121.07495 * 0.51019 * 4 3 2 7 7 C 1.31630 * 121.86618 * 359.74234 * 6 4 3 8 8 C 1.39769 * 120.55556 * 0.02562 * 7 6 4 9 9 C 1.47771 * 120.55327 * 180.02562 * 8 7 6 10 10 O 1.21771 * 119.99719 * 174.12852 * 9 8 7 11 11 C 1.41818 * 120.00134 * 354.12542 * 9 8 7 12 12 H 1.07999 * 120.00178 * 359.97438 * 11 9 8 13 13 C 1.40346 * 119.99880 * 180.02562 * 11 9 8 14 14 N 1.30528 * 120.00063 * 359.97438 * 13 11 9 15 15 Si 1.86797 * 119.99815 * 179.97438 * 13 11 9 16 16 H 1.48500 * 109.46884 * 90.00157 * 15 13 11 17 17 H 1.48493 * 109.47215 * 210.00064 * 15 13 11 18 18 H 1.48503 * 109.47516 * 330.00395 * 15 13 11 19 19 H 1.08994 * 109.46917 * 263.16587 * 1 2 3 20 20 H 1.09008 * 109.46684 * 143.16808 * 1 2 3 21 21 H 1.08997 * 109.47718 * 23.17029 * 1 2 3 22 22 H 1.07997 * 120.34378 * 0.02562 * 3 2 1 23 23 H 1.07999 * 119.72509 * 179.97438 * 7 6 4 24 24 H 0.96993 * 120.00012 * 179.97438 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2157 1.1867 0.0000 4 6 3.6013 1.1496 0.0047 5 17 4.4953 2.6376 0.0115 6 7 4.2527 0.0002 -0.0010 7 6 3.6227 -1.1555 -0.0062 8 6 2.2259 -1.2034 -0.0065 9 6 1.5188 -2.5010 -0.0117 10 8 0.3063 -2.5340 0.0960 11 6 2.2522 -3.7077 -0.1423 12 1 3.3275 -3.6784 -0.2383 13 6 1.5805 -4.9400 -0.1479 14 7 0.2808 -4.9754 -0.0324 15 14 2.5465 -6.5295 -0.3206 16 1 2.9282 -7.0255 1.0261 17 1 1.7076 -7.5469 -1.0033 18 1 3.7717 -6.2796 -1.1216 19 1 -0.3633 -0.1223 1.0203 20 1 -0.3633 -0.8226 -0.6161 21 1 -0.3634 0.9447 -0.4043 22 1 1.6953 2.1330 0.0004 23 1 4.1900 -2.0746 -0.0112 24 1 -0.1834 -5.8270 -0.0366 RHF calculation, no. of doubly occupied orbitals= 37 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000694948313.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:45:23 Heat of formation + Delta-G solvation = -23.659309 kcal Electronic energy + Delta-G solvation = -12797.578798 eV Core-core repulsion = 10315.505006 eV Total energy + Delta-G solvation = -2482.073792 eV No. of doubly occupied orbitals = 37 Molecular weight (most abundant/longest-lived isotopes) = 225.030 amu Computer time = 0.19 seconds Orbital eigenvalues (eV) -39.73927 -36.84928 -36.12731 -33.45092 -32.58445 -30.69806 -27.88728 -26.38235 -23.59553 -21.77457 -19.91687 -17.03073 -16.31771 -15.87184 -15.58116 -14.34249 -14.19005 -13.78718 -12.98683 -12.69096 -12.27149 -12.14897 -11.90244 -11.41592 -11.33399 -11.25319 -11.01363 -10.92042 -10.62549 -10.45233 -9.14598 -9.12916 -9.00370 -8.25296 -7.56517 -6.46110 -5.08887 1.30523 1.69660 2.15475 2.97031 3.06059 3.09136 3.84660 3.89437 4.42568 4.95305 5.31794 5.44976 5.48871 5.56204 5.79237 6.10152 6.21051 6.36496 6.44172 6.69419 7.01638 7.07995 7.19799 7.84764 8.22553 8.59718 8.62512 10.10971 10.32060 Molecular weight = 225.03amu Principal moments of inertia in cm(-1) A = 0.044208 B = 0.007548 C = 0.006474 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 633.210358 B = 3708.517385 C = 4323.802967 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C -0.009 4.009 3 C -0.169 4.169 4 C 0.162 3.838 5 Cl -0.057 7.057 6 N -0.495 5.495 7 C 0.137 3.863 8 C -0.151 4.151 9 C 0.388 3.612 10 O -0.530 6.530 11 C -0.511 4.511 12 H 0.076 0.924 13 C 0.079 3.921 14 N -0.729 5.729 15 Si 0.909 3.091 16 H -0.267 1.267 17 H -0.275 1.275 18 H -0.260 1.260 19 H 0.074 0.926 20 H 0.107 0.893 21 H 0.048 0.952 22 H 0.135 0.865 23 H 0.172 0.828 24 H 0.277 0.723 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.479 6.625 -0.305 7.489 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.017 4.017 3 C -0.190 4.190 4 C -0.001 4.001 5 Cl -0.029 7.029 6 N -0.207 5.207 7 C -0.020 4.020 8 C -0.154 4.154 9 C 0.284 3.716 10 O -0.420 6.420 11 C -0.541 4.541 12 H 0.094 0.906 13 C -0.145 4.145 14 N -0.357 5.357 15 Si 0.732 3.268 16 H -0.192 1.192 17 H -0.200 1.200 18 H -0.183 1.183 19 H 0.093 0.907 20 H 0.125 0.875 21 H 0.067 0.933 22 H 0.153 0.847 23 H 0.189 0.811 24 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges 3.704 6.710 -0.244 7.668 hybrid contribution -0.022 -0.505 -0.056 0.509 sum 3.683 6.205 -0.300 7.221 Atomic orbital electron populations 1.20974 0.89167 1.02566 1.03970 1.20620 0.97645 0.91158 0.92274 1.21582 0.92220 0.99466 1.05735 1.21542 0.88504 0.88044 1.02037 1.98348 1.77284 1.30445 1.96814 1.66901 1.41635 0.97626 1.14540 1.23149 0.91857 0.93942 0.93014 1.22926 0.95272 0.98968 0.98256 1.17948 0.88612 0.84895 0.80148 1.90457 1.14981 1.87378 1.49204 1.20946 0.95436 0.91583 1.46153 0.90588 1.25994 0.94769 1.01030 0.92717 1.69927 1.08494 1.27583 1.29731 0.86320 0.80473 0.80534 0.79445 1.19241 1.20044 1.18334 0.90696 0.87504 0.93348 0.84698 0.81091 0.91218 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -2.07 8.84 36.00 0.32 -1.76 14 2 C -0.01 -0.18 5.95 -103.90 -0.62 -0.80 14 3 C -0.17 -2.96 9.54 -39.45 -0.38 -3.33 14 4 C 0.16 2.95 7.28 -17.30 -0.13 2.82 14 5 Cl -0.06 -0.87 29.10 -51.86 -1.51 -2.38 14 6 N -0.50 -9.79 10.32 -9.93 -0.10 -9.90 14 7 C 0.14 2.81 10.61 -17.07 -0.18 2.63 14 8 C -0.15 -3.38 5.90 -104.70 -0.62 -3.99 14 9 C 0.39 10.15 6.87 -34.32 -0.24 9.92 14 10 O -0.53 -15.18 12.05 5.13 0.06 -15.12 14 11 C -0.51 -13.05 8.86 -37.42 -0.33 -13.38 14 12 H 0.08 1.75 6.09 -52.49 -0.32 1.43 14 13 C 0.08 1.99 5.50 -17.31 -0.10 1.90 14 14 N -0.73 -19.62 11.73 55.57 0.65 -18.96 14 15 Si 0.91 18.20 29.56 -169.99 -5.03 13.18 14 16 H -0.27 -5.27 7.11 56.52 0.40 -4.87 14 17 H -0.28 -5.41 7.11 56.52 0.40 -5.01 14 18 H -0.26 -5.06 7.11 56.52 0.40 -4.66 14 19 H 0.07 1.40 8.14 -51.93 -0.42 0.98 14 20 H 0.11 2.32 5.97 -51.92 -0.31 2.01 14 21 H 0.05 0.73 8.06 -51.93 -0.42 0.31 14 22 H 0.14 1.94 8.06 -52.49 -0.42 1.52 14 23 H 0.17 3.25 6.26 -52.49 -0.33 2.92 14 24 H 0.28 6.68 8.29 -40.82 -0.34 6.34 14 LS Contribution 234.31 15.07 3.53 3.53 Total: -1.00 -28.65 234.31 -6.01 -34.66 By element: Atomic # 1 Polarization: 2.34 SS G_CDS: -1.36 Total: 0.98 kcal Atomic # 6 Polarization: -3.73 SS G_CDS: -2.26 Total: -6.00 kcal Atomic # 7 Polarization: -29.41 SS G_CDS: 0.55 Total: -28.86 kcal Atomic # 8 Polarization: -15.18 SS G_CDS: 0.06 Total: -15.12 kcal Atomic # 14 Polarization: 18.20 SS G_CDS: -5.03 Total: 13.18 kcal Atomic # 17 Polarization: -0.87 SS G_CDS: -1.51 Total: -2.38 kcal Total LS contribution 3.53 Total: 3.53 kcal Total: -28.65 -6.01 -34.66 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000694948313.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.003 kcal (2) G-P(sol) polarization free energy of solvation -28.651 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.648 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.012 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.662 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.659 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.19 seconds