Wall clock time and date at job start Mon Mar 30 2020 02:44:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.36482 * 125.64188 * 2 1 4 4 C 1.34852 * 108.22397 * 180.02562 * 3 2 1 5 5 C 1.41122 * 107.40351 * 359.97438 * 4 3 2 6 6 C 1.34860 * 107.37158 * 0.03348 * 5 4 3 7 7 Cl 1.73596 * 125.82032 * 180.02562 * 6 5 4 8 8 C 1.51188 * 109.26990 * 179.97438 * 5 4 3 9 9 C 1.54345 * 105.35150 * 17.28488 * 8 5 4 10 10 C 1.51190 * 143.17605 * 180.02562 * 4 3 2 11 11 H 1.09002 * 110.28787 * 281.66650 * 10 4 3 12 12 C 1.50702 * 110.36824 * 43.73466 * 10 4 3 13 13 H 1.08000 * 119.99662 * 357.34930 * 12 10 4 14 14 C 1.37873 * 119.99983 * 177.35106 * 12 10 4 15 15 N 1.31513 * 120.00359 * 359.97438 * 14 12 10 16 16 Si 1.86809 * 119.99907 * 180.02562 * 14 12 10 17 17 H 1.48498 * 109.47024 * 59.99454 * 16 14 12 18 18 H 1.48494 * 109.46914 * 179.97438 * 16 14 12 19 19 H 1.48493 * 109.46557 * 299.99538 * 16 14 12 20 20 H 1.08998 * 109.47142 * 89.99391 * 1 2 3 21 21 H 1.08999 * 109.47686 * 210.00150 * 1 2 3 22 22 H 1.09002 * 109.47225 * 330.00320 * 1 2 3 23 23 H 1.08002 * 125.88762 * 0.07284 * 3 2 1 24 24 H 1.09002 * 110.28557 * 258.28661 * 8 5 4 25 25 H 1.09004 * 110.28403 * 136.27901 * 8 5 4 26 26 H 1.08997 * 110.74414 * 91.65140 * 9 8 5 27 27 H 1.09001 * 110.73666 * 214.99018 * 9 8 5 28 28 H 0.97005 * 120.00281 * 180.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2603 1.1092 0.0000 4 6 3.5470 0.7055 -0.0006 5 6 3.5466 -0.7057 -0.0003 6 6 2.2594 -1.1081 -0.0004 7 17 1.7097 -2.7547 0.0005 8 6 4.9737 -1.2050 -0.0016 9 6 5.8291 0.0015 0.4396 10 6 4.9730 1.2078 -0.0006 11 1 5.2605 1.5291 -1.0017 12 6 5.1288 2.3443 0.9769 13 1 4.2705 2.7101 1.5208 14 6 6.3669 2.9169 1.1766 15 7 7.4122 2.4711 0.5146 16 14 6.5601 4.3251 2.3888 17 1 6.1515 3.8723 3.7427 18 1 7.9796 4.7599 2.4202 19 1 5.7029 5.4620 1.9673 20 1 -0.3633 0.0001 -1.0276 21 1 -0.3634 -0.8899 0.5138 22 1 -0.3634 0.8900 0.5138 23 1 1.9181 2.1335 0.0011 24 1 5.2609 -1.5259 -1.0029 25 1 5.0870 -2.0272 0.7051 26 1 5.9683 0.0014 1.5207 27 1 6.7902 0.0018 -0.0746 28 1 8.2834 2.8738 0.6555 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260989402.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:44:28 Heat of formation + Delta-G solvation = 43.268440 kcal Electronic energy + Delta-G solvation = -13278.284927 eV Core-core repulsion = 10934.946435 eV Total energy + Delta-G solvation = -2343.338492 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 225.062 amu Computer time = 0.14 seconds Orbital eigenvalues (eV) -40.80665 -36.28776 -35.78069 -32.48744 -30.49020 -28.93944 -26.23810 -25.31061 -23.31743 -20.38361 -18.99491 -18.48324 -16.37895 -15.91968 -15.03404 -14.45570 -13.77884 -13.67252 -13.51057 -12.60312 -12.34446 -12.11437 -11.66239 -11.18486 -11.11417 -11.03300 -10.84671 -10.51006 -10.46318 -10.24678 -9.71201 -9.32924 -8.90101 -8.33177 -7.48755 -7.26501 -5.93013 -3.95296 2.24044 2.63754 3.36840 3.41422 3.43535 3.49478 3.72413 4.51692 4.90221 5.27809 5.38707 5.48807 5.56188 5.72154 6.17977 6.34975 6.48554 6.52426 6.86720 7.11043 7.24999 7.33462 7.54487 7.71785 7.79807 7.94775 7.97272 8.07746 8.53137 9.05421 9.67766 11.15790 Molecular weight = 225.06amu Principal moments of inertia in cm(-1) A = 0.042511 B = 0.007992 C = 0.007043 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 658.497879 B = 3502.551706 C = 3974.462679 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.080 3.920 2 N -0.457 5.457 3 C -0.004 4.004 4 C -0.124 4.124 5 C -0.164 4.164 6 C 0.057 3.943 7 Cl -0.052 7.052 8 C -0.047 4.047 9 C -0.086 4.086 10 C 0.111 3.889 11 H 0.038 0.962 12 C -0.506 4.506 13 H 0.055 0.945 14 C 0.062 3.938 15 N -0.892 5.892 16 Si 0.889 3.111 17 H -0.278 1.278 18 H -0.288 1.288 19 H -0.278 1.278 20 H 0.066 0.934 21 H 0.076 0.924 22 H 0.082 0.918 23 H 0.164 0.836 24 H 0.060 0.940 25 H 0.051 0.949 26 H 0.056 0.944 27 H 0.068 0.932 28 H 0.260 0.740 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.781 -6.206 -1.359 12.514 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.139 5.139 3 C -0.130 4.130 4 C -0.130 4.130 5 C -0.173 4.173 6 C -0.077 4.077 7 Cl -0.024 7.024 8 C -0.085 4.085 9 C -0.124 4.124 10 C 0.092 3.908 11 H 0.056 0.944 12 C -0.544 4.544 13 H 0.073 0.927 14 C -0.140 4.140 15 N -0.530 5.530 16 Si 0.717 3.283 17 H -0.204 1.204 18 H -0.214 1.214 19 H -0.204 1.204 20 H 0.085 0.915 21 H 0.095 0.905 22 H 0.101 0.899 23 H 0.181 0.819 24 H 0.078 0.922 25 H 0.069 0.931 26 H 0.075 0.925 27 H 0.087 0.913 28 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges -11.008 -6.313 -1.379 12.764 hybrid contribution -0.161 0.604 0.719 0.953 sum -11.168 -5.708 -0.660 12.560 Atomic orbital electron populations 1.21863 0.77775 1.03885 1.02669 1.43645 1.05486 1.04321 1.60423 1.20847 0.89343 0.89890 1.12893 1.21155 0.95794 0.93424 1.02656 1.20258 0.92318 0.96718 1.08011 1.19599 0.88855 0.79837 1.19395 1.98298 1.90751 1.15562 1.97830 1.20638 0.88878 0.99067 0.99898 1.22215 0.97643 0.92085 1.00453 1.17810 0.82870 0.93088 0.96988 0.94375 1.21089 0.93969 1.16056 1.23291 0.92722 1.24956 0.96065 0.96916 0.96019 1.69947 0.99551 1.41890 1.41648 0.86706 0.76853 0.82823 0.81875 1.20399 1.21413 1.20408 0.91495 0.90481 0.89897 0.81913 0.92191 0.93050 0.92529 0.91290 0.93047 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.94 10.95 59.85 0.66 1.60 15 2 N -0.46 -7.83 3.15 -121.01 -0.38 -8.21 15 3 C 0.00 -0.07 11.44 -16.68 -0.19 -0.26 15 4 C -0.12 -2.82 6.18 -104.49 -0.65 -3.47 15 5 C -0.16 -3.47 6.90 -104.49 -0.72 -4.19 15 6 C 0.06 1.07 7.40 -16.74 -0.12 0.95 15 7 Cl -0.05 -0.81 28.73 -51.86 -1.49 -2.30 15 8 C -0.05 -0.97 6.75 -26.94 -0.18 -1.15 15 9 C -0.09 -2.05 5.60 -25.33 -0.14 -2.20 15 10 C 0.11 2.85 2.79 -91.98 -0.26 2.59 15 11 H 0.04 1.06 8.14 -51.93 -0.42 0.63 15 12 C -0.51 -13.95 8.47 -34.44 -0.29 -14.24 15 13 H 0.05 1.50 7.76 -52.49 -0.41 1.09 15 14 C 0.06 1.70 5.33 -17.82 -0.09 1.61 15 15 N -0.89 -25.43 12.29 55.43 0.68 -24.75 15 16 Si 0.89 21.32 29.54 -169.99 -5.02 16.30 15 17 H -0.28 -6.64 7.11 56.52 0.40 -6.24 15 18 H -0.29 -6.87 7.11 56.52 0.40 -6.47 15 19 H -0.28 -6.58 7.11 56.52 0.40 -6.18 15 20 H 0.07 0.68 8.14 -51.93 -0.42 0.26 15 21 H 0.08 0.82 7.78 -51.93 -0.40 0.42 15 22 H 0.08 0.81 8.14 -51.93 -0.42 0.39 15 23 H 0.16 2.81 8.06 -52.49 -0.42 2.39 15 24 H 0.06 1.15 8.14 -51.93 -0.42 0.73 15 25 H 0.05 0.97 8.14 -51.93 -0.42 0.55 15 26 H 0.06 1.43 7.91 -51.93 -0.41 1.02 15 27 H 0.07 1.70 7.85 -51.93 -0.41 1.29 15 28 H 0.26 7.10 8.31 -40.82 -0.34 6.76 15 LS Contribution 255.21 15.07 3.85 3.85 Total: -1.00 -29.58 255.21 -7.66 -37.24 By element: Atomic # 1 Polarization: -0.05 SS G_CDS: -3.30 Total: -3.36 kcal Atomic # 6 Polarization: -16.77 SS G_CDS: -1.99 Total: -18.77 kcal Atomic # 7 Polarization: -33.27 SS G_CDS: 0.30 Total: -32.97 kcal Atomic # 14 Polarization: 21.32 SS G_CDS: -5.02 Total: 16.30 kcal Atomic # 17 Polarization: -0.81 SS G_CDS: -1.49 Total: -2.30 kcal Total LS contribution 3.85 Total: 3.85 kcal Total: -29.58 -7.66 -37.24 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260989402.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.511 kcal (2) G-P(sol) polarization free energy of solvation -29.583 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.928 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.659 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.242 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.268 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.14 seconds