Wall clock time and date at job start Mon Mar 30 2020 02:38:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.50701 * 109.47161 * 2 1 4 4 C 1.38329 * 120.14800 * 269.97762 * 3 2 1 5 5 N 1.39681 * 119.94579 * 0.02562 * 4 3 2 6 6 C 1.39272 * 120.10875 * 180.02562 * 4 3 2 7 7 C 1.38638 * 120.41166 * 0.02562 * 6 4 3 8 8 Cl 1.73598 * 119.84956 * 179.97438 * 7 6 4 9 9 C 1.37766 * 120.29523 * 359.66988 * 7 6 4 10 10 C 1.40570 * 120.14916 * 90.00057 * 3 2 1 11 11 C 1.41406 * 120.20158 * 359.97438 * 10 3 2 12 12 H 1.08006 * 119.99988 * 334.57494 * 11 10 3 13 13 C 1.39925 * 120.00163 * 154.57969 * 11 10 3 14 14 N 1.30831 * 119.99766 * 334.65529 * 13 11 10 15 15 Si 1.86805 * 120.00256 * 154.65801 * 13 11 10 16 16 H 1.48497 * 109.46897 * 179.97438 * 15 13 11 17 17 H 1.48498 * 109.46802 * 299.99637 * 15 13 11 18 18 H 1.48503 * 109.46977 * 59.99565 * 15 13 11 19 19 H 1.08999 * 109.47188 * 59.99882 * 1 2 3 20 20 H 1.08992 * 109.47170 * 179.97438 * 1 2 3 21 21 H 1.09005 * 109.47087 * 300.00467 * 1 2 3 22 22 H 1.08998 * 109.46773 * 240.00128 * 2 1 3 23 23 H 1.08999 * 109.47188 * 120.00118 * 2 1 3 24 24 H 0.97000 * 119.99981 * 0.02562 * 5 4 3 25 25 H 0.96999 * 119.99886 * 179.97438 * 5 4 3 26 26 H 1.07999 * 119.78934 * 179.97438 * 6 4 3 27 27 H 1.08002 * 120.05810 * 180.32374 * 9 7 6 28 28 H 0.97001 * 120.00012 * 354.17948 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0324 1.4208 0.0000 4 6 2.2644 2.0757 -1.1962 5 7 2.0322 1.4191 -2.4070 6 6 2.7291 3.3886 -1.1952 7 6 2.9634 4.0492 0.0009 8 17 3.5433 5.6854 -0.0150 9 6 2.7320 3.4152 1.2019 10 6 2.2677 2.0865 1.2155 11 6 2.0340 1.4271 2.4445 12 1 1.3213 0.6172 2.4958 13 6 2.7261 1.8240 3.5940 14 7 3.8900 2.4118 3.4867 15 14 1.9882 1.5145 5.2820 16 1 2.9118 2.0244 6.3270 17 1 0.6839 2.2164 5.3883 18 1 1.7825 0.0562 5.4725 19 1 -0.3633 0.5138 -0.8900 20 1 -0.3633 -1.0276 -0.0005 21 1 -0.3633 0.5139 0.8900 22 1 1.8933 -0.5138 -0.8900 23 1 1.8934 -0.5138 0.8900 24 1 1.7081 0.5048 -2.4086 25 1 2.1943 1.8777 -3.2462 26 1 2.9090 3.8948 -2.1321 27 1 2.9108 3.9353 2.1314 28 1 4.3120 2.4968 2.6174 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000575715406.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:38:05 Heat of formation + Delta-G solvation = -15.877441 kcal Electronic energy + Delta-G solvation = -13366.230758 eV Core-core repulsion = 11020.327508 eV Total energy + Delta-G solvation = -2345.903250 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 225.062 amu Computer time = 0.17 seconds Orbital eigenvalues (eV) -38.42925 -35.64443 -34.72521 -32.87470 -32.25360 -28.65921 -27.07465 -25.27523 -22.73611 -20.95698 -19.57678 -17.91604 -16.40520 -15.52046 -14.59435 -14.17257 -13.80973 -13.35642 -13.03271 -12.66214 -12.38101 -12.04309 -11.65063 -11.32752 -11.18053 -10.79969 -10.72705 -10.42425 -10.32966 -10.06062 -9.74815 -9.41420 -9.27677 -8.81996 -7.51682 -7.21786 -6.48361 -4.50313 2.63483 2.89865 3.15989 3.23190 3.28159 3.36447 4.01055 4.51954 4.75537 5.39097 5.84701 5.89579 6.24517 6.31209 6.43968 6.60291 6.66755 6.78319 6.87920 6.97416 7.19556 7.49623 7.53691 7.61253 7.74633 7.97389 8.13050 8.42303 8.57218 8.72723 8.87779 10.03702 Molecular weight = 225.06amu Principal moments of inertia in cm(-1) A = 0.020162 B = 0.012916 C = 0.008315 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1388.401385 B = 2167.331513 C = 3366.534096 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C -0.048 4.048 3 C -0.264 4.264 4 C 0.254 3.746 5 N -0.889 5.889 6 C -0.313 4.313 7 C 0.047 3.953 8 Cl -0.124 7.124 9 C -0.246 4.246 10 C 0.139 3.861 11 C -0.510 4.510 12 H 0.082 0.918 13 C 0.038 3.962 14 N -0.788 5.788 15 Si 1.063 2.937 16 H -0.274 1.274 17 H -0.274 1.274 18 H -0.276 1.276 19 H 0.042 0.958 20 H 0.037 0.963 21 H 0.056 0.944 22 H 0.037 0.963 23 H 0.066 0.934 24 H 0.389 0.611 25 H 0.384 0.616 26 H 0.097 0.903 27 H 0.114 0.886 28 H 0.302 0.698 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.038 -2.021 -4.206 5.568 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 C -0.086 4.086 3 C -0.270 4.270 4 C 0.152 3.848 5 N -0.430 5.430 6 C -0.337 4.337 7 C 0.020 3.980 8 Cl -0.095 7.095 9 C -0.267 4.267 10 C 0.135 3.865 11 C -0.537 4.537 12 H 0.100 0.900 13 C -0.185 4.185 14 N -0.411 5.411 15 Si 0.886 3.114 16 H -0.199 1.199 17 H -0.199 1.199 18 H -0.201 1.201 19 H 0.061 0.939 20 H 0.056 0.944 21 H 0.075 0.925 22 H 0.056 0.944 23 H 0.085 0.915 24 H 0.218 0.782 25 H 0.211 0.789 26 H 0.115 0.885 27 H 0.132 0.868 28 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -2.663 -1.560 -2.520 3.984 hybrid contribution -0.189 -0.117 -2.132 2.144 sum -2.852 -1.677 -4.652 5.709 Atomic orbital electron populations 1.21750 0.97159 0.99421 1.01623 1.19899 0.94103 0.94351 1.00198 1.19103 1.20244 0.96558 0.91141 1.17078 0.92227 0.90202 0.85328 1.42427 1.78553 1.16975 1.05070 1.19503 1.23152 0.95649 0.95367 1.20285 0.99820 0.82825 0.95087 1.98260 1.88040 1.24157 1.99081 1.20929 1.14716 0.95910 0.95101 1.17109 0.87635 0.89688 0.92077 1.20545 1.22611 1.17216 0.93360 0.90022 1.27024 0.94054 0.91909 1.05495 1.70437 1.11766 1.27103 1.31781 0.83670 0.76609 0.77490 0.73623 1.19855 1.19940 1.20121 0.93885 0.94366 0.92463 0.94407 0.91503 0.78217 0.78936 0.88487 0.86849 0.88456 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.49 9.88 37.16 0.37 -2.13 15 2 C -0.05 -0.94 5.01 -27.88 -0.14 -1.08 15 3 C -0.26 -6.07 5.21 -103.71 -0.54 -6.61 15 4 C 0.25 5.45 6.72 -83.86 -0.56 4.88 15 5 N -0.89 -14.86 8.99 32.37 0.29 -14.56 15 6 C -0.31 -6.98 9.68 -39.05 -0.38 -7.35 15 7 C 0.05 1.10 6.31 -39.61 -0.25 0.85 15 8 Cl -0.12 -2.58 28.94 -51.86 -1.50 -4.08 15 9 C -0.25 -6.27 7.72 -38.80 -0.30 -6.57 15 10 C 0.14 3.54 5.29 -106.86 -0.57 2.97 15 11 C -0.51 -12.87 8.06 -37.75 -0.30 -13.17 15 12 H 0.08 1.99 6.64 -52.48 -0.35 1.64 15 13 C 0.04 0.95 4.94 -17.35 -0.09 0.86 15 14 N -0.79 -20.64 12.32 55.55 0.68 -19.96 15 15 Si 1.06 21.13 30.00 -169.99 -5.10 16.03 15 16 H -0.27 -5.46 7.11 56.52 0.40 -5.06 15 17 H -0.27 -5.30 7.11 56.52 0.40 -4.90 15 18 H -0.28 -5.17 7.11 56.52 0.40 -4.77 15 19 H 0.04 0.73 8.14 -51.93 -0.42 0.30 15 20 H 0.04 0.57 8.14 -51.93 -0.42 0.14 15 21 H 0.06 1.09 7.88 -51.93 -0.41 0.68 15 22 H 0.04 0.66 6.54 -51.93 -0.34 0.32 15 23 H 0.07 1.39 6.77 -51.93 -0.35 1.04 15 24 H 0.39 5.87 6.80 -40.82 -0.28 5.59 15 25 H 0.38 5.51 8.84 -40.82 -0.36 5.15 15 26 H 0.10 1.99 8.06 -52.49 -0.42 1.57 15 27 H 0.11 3.04 6.50 -52.49 -0.34 2.69 15 28 H 0.30 8.17 6.69 -40.82 -0.27 7.90 15 LS Contribution 251.38 15.07 3.79 3.79 Total: -1.00 -26.45 251.38 -7.36 -33.81 By element: Atomic # 1 Polarization: 15.07 SS G_CDS: -2.76 Total: 12.30 kcal Atomic # 6 Polarization: -24.58 SS G_CDS: -2.76 Total: -27.34 kcal Atomic # 7 Polarization: -35.50 SS G_CDS: 0.98 Total: -34.52 kcal Atomic # 14 Polarization: 21.13 SS G_CDS: -5.10 Total: 16.03 kcal Atomic # 17 Polarization: -2.58 SS G_CDS: -1.50 Total: -4.08 kcal Total LS contribution 3.79 Total: 3.79 kcal Total: -26.45 -7.36 -33.81 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000575715406.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.937 kcal (2) G-P(sol) polarization free energy of solvation -26.452 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.516 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.362 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.814 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.877 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.17 seconds