Wall clock time and date at job start Mon Mar 30 2020 03:19:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46972 * 110.99971 * 2 1 4 4 C 1.52965 * 109.84395 * 174.77748 * 3 2 1 5 5 C 1.53225 * 109.56141 * 58.43776 * 4 3 2 6 6 H 1.09004 * 109.68955 * 182.78059 * 5 4 3 7 7 C 1.50704 * 109.57920 * 62.45025 * 5 4 3 8 8 H 1.07992 * 120.00170 * 246.11185 * 7 5 4 9 9 C 1.37883 * 119.99822 * 66.10724 * 7 5 4 10 10 N 1.31512 * 119.99795 * 9.21067 * 9 7 5 11 11 Si 1.86801 * 119.99967 * 189.20780 * 9 7 5 12 12 H 1.48501 * 109.46880 * 94.99198 * 11 9 7 13 13 H 1.48495 * 109.46839 * 214.99458 * 11 9 7 14 14 H 1.48496 * 109.46755 * 334.99295 * 11 9 7 15 15 C 1.52971 * 108.82878 * 302.64710 * 5 4 3 16 16 H 1.08999 * 109.61539 * 298.61340 * 15 5 4 17 17 C 1.52919 * 110.26297 * 177.98321 * 15 5 4 18 18 O 1.43028 * 109.07375 * 182.21878 * 17 15 5 19 19 C 1.42850 * 114.41353 * 60.81393 * 18 17 15 20 20 C 1.53189 * 109.71354 * 299.55430 * 19 18 17 21 21 C 1.46680 * 111.00120 * 236.26730 * 2 1 3 22 22 H 1.09001 * 109.45570 * 66.50549 * 21 2 1 23 23 H 1.08995 * 109.47025 * 183.73593 * 1 2 3 24 24 H 1.08997 * 109.47257 * 303.73629 * 1 2 3 25 25 H 1.09001 * 109.46994 * 63.73441 * 1 2 3 26 26 H 1.08999 * 109.40832 * 54.65745 * 3 2 1 27 27 H 1.09001 * 109.34537 * 294.84967 * 3 2 1 28 28 H 1.09006 * 109.45112 * 298.41674 * 4 3 2 29 29 H 1.08991 * 109.45904 * 178.47038 * 4 3 2 30 30 H 0.97002 * 120.00220 * 180.02562 * 10 9 7 31 31 H 1.09003 * 109.53744 * 62.34788 * 17 15 5 32 32 H 1.08995 * 109.53896 * 302.10021 * 17 15 5 33 33 H 1.08997 * 109.42293 * 59.63107 * 19 18 17 34 34 H 1.08998 * 109.42553 * 179.52940 * 19 18 17 35 35 H 1.09004 * 109.56894 * 177.02485 * 20 19 18 36 36 H 1.08996 * 109.57751 * 297.38707 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9957 1.3721 0.0000 4 6 3.5195 1.3434 0.1310 5 6 4.1188 0.5384 -1.0269 6 1 5.2006 0.4749 -0.9088 7 6 3.7924 1.2140 -2.3339 8 1 3.1409 0.7281 -3.0450 9 6 4.3255 2.4526 -2.6217 10 7 5.2562 2.9642 -1.8460 11 14 3.7260 3.4039 -4.1133 12 1 2.6599 4.3516 -3.7003 13 1 4.8582 4.1600 -4.7061 14 1 3.1831 2.4560 -5.1193 15 6 3.5182 -0.8684 -1.0131 16 1 3.7719 -1.3653 -0.0767 17 6 4.0574 -1.6859 -2.1875 18 8 3.4414 -2.9768 -2.1803 19 6 2.0199 -2.9534 -2.3198 20 6 1.3996 -2.1698 -1.1588 21 6 1.9947 -0.7604 -1.1388 22 1 1.7423 -0.2463 -2.0662 23 1 -0.3633 -1.0254 0.0670 24 1 -0.3633 0.5707 0.8546 25 1 -0.3633 0.4548 -0.9216 26 1 1.5703 1.9234 0.8386 27 1 1.7216 1.8641 -0.9332 28 1 3.7937 0.8773 1.0774 29 1 3.9056 2.3622 0.1030 30 1 5.6310 3.8358 -2.0482 31 1 5.1373 -1.7970 -2.0891 32 1 3.8258 -1.1767 -3.1230 33 1 1.7561 -2.4744 -3.2627 34 1 1.6381 -3.9743 -2.3123 35 1 0.3199 -2.1083 -1.2955 36 1 1.6221 -2.6734 -0.2181 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260760346.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:19:45 Heat of formation + Delta-G solvation = -51.907458 kcal Electronic energy + Delta-G solvation = -17075.568282 eV Core-core repulsion = 14559.059678 eV Total energy + Delta-G solvation = -2516.508604 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 225.147 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -39.61415 -36.79609 -34.14078 -31.63109 -31.53023 -29.41264 -26.39447 -24.96933 -23.90907 -23.17991 -20.81756 -19.79301 -18.87708 -15.99682 -15.64204 -15.30605 -14.76804 -14.50221 -14.38625 -14.04198 -13.47169 -13.10113 -12.85023 -12.28522 -12.19609 -11.67048 -11.21677 -11.19128 -10.98264 -10.94901 -10.70873 -10.57633 -10.37082 -10.06855 -9.99101 -9.47428 -9.03477 -8.82751 -8.57056 -8.34612 -7.55608 -6.05927 -4.06480 3.25098 3.33725 3.35483 4.39259 4.42051 4.60088 5.26297 5.28552 5.46187 5.50396 5.65014 5.78595 5.88344 5.94745 6.05687 6.06834 6.19429 6.20768 6.33755 6.37935 6.45252 6.52232 6.62956 6.76010 6.92569 7.02445 7.14990 7.32099 7.57014 7.68301 7.78446 7.87361 7.95288 8.01947 8.40219 8.95160 9.56112 11.03093 Molecular weight = 225.15amu Principal moments of inertia in cm(-1) A = 0.025611 B = 0.011718 C = 0.010100 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1093.007096 B = 2388.904151 C = 2771.587810 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 N -0.537 5.537 3 C 0.069 3.931 4 C -0.099 4.099 5 C 0.050 3.950 6 H 0.037 0.963 7 C -0.510 4.510 8 H 0.054 0.946 9 C 0.067 3.933 10 N -0.885 5.885 11 Si 0.879 3.121 12 H -0.282 1.282 13 H -0.286 1.286 14 H -0.275 1.275 15 C -0.100 4.100 16 H 0.059 0.941 17 C 0.072 3.928 18 O -0.397 6.397 19 C 0.068 3.932 20 C -0.152 4.152 21 C 0.096 3.904 22 H 0.049 0.951 23 H 0.062 0.938 24 H 0.058 0.942 25 H 0.017 0.983 26 H 0.048 0.952 27 H 0.041 0.959 28 H 0.029 0.971 29 H 0.076 0.924 30 H 0.260 0.740 31 H 0.088 0.912 32 H 0.061 0.939 33 H 0.043 0.957 34 H 0.083 0.917 35 H 0.063 0.937 36 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.040 -6.368 1.291 9.580 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 N -0.262 5.262 3 C -0.058 4.058 4 C -0.137 4.137 5 C 0.031 3.969 6 H 0.055 0.945 7 C -0.548 4.548 8 H 0.072 0.928 9 C -0.135 4.135 10 N -0.523 5.523 11 Si 0.707 3.293 12 H -0.208 1.208 13 H -0.212 1.212 14 H -0.200 1.200 15 C -0.119 4.119 16 H 0.077 0.923 17 C -0.004 4.004 18 O -0.316 6.316 19 C -0.010 4.010 20 C -0.190 4.190 21 C -0.012 4.012 22 H 0.067 0.933 23 H 0.080 0.920 24 H 0.077 0.923 25 H 0.036 0.964 26 H 0.066 0.934 27 H 0.059 0.941 28 H 0.047 0.953 29 H 0.094 0.906 30 H 0.070 0.930 31 H 0.107 0.893 32 H 0.080 0.920 33 H 0.061 0.939 34 H 0.101 0.899 35 H 0.081 0.919 36 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -6.656 -6.587 1.763 9.529 hybrid contribution -0.868 1.442 -1.546 2.285 sum -7.524 -5.146 0.217 9.118 Atomic orbital electron populations 1.22343 0.89422 1.01067 0.99686 1.62076 1.05821 1.15270 1.42985 1.22013 0.97403 0.87185 0.99230 1.21479 0.92395 1.02405 0.97410 1.18684 0.95930 0.88211 0.94033 0.94528 1.21099 1.28916 1.02623 1.02191 0.92832 1.24914 0.94513 0.97850 0.96209 1.69953 1.25756 1.17858 1.38750 0.86784 0.78593 0.80419 0.83492 1.20843 1.21243 1.20001 1.21754 0.93570 0.99166 0.97385 0.92286 1.22696 0.97056 0.81855 0.98804 1.87809 1.19015 1.30362 1.94402 1.22417 0.82103 0.99796 0.96682 1.22355 0.99547 0.97092 0.99988 1.21526 0.95565 0.91816 0.92310 0.93310 0.91973 0.92288 0.96396 0.93396 0.94098 0.95263 0.90570 0.93024 0.89344 0.92046 0.93883 0.89852 0.91875 0.90912 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.37 9.07 60.07 0.54 0.91 16 2 N -0.54 -10.21 4.79 -234.87 -1.12 -11.33 16 3 C 0.07 1.43 5.24 -3.80 -0.02 1.41 16 4 C -0.10 -2.27 5.46 -26.63 -0.15 -2.41 16 5 C 0.05 1.20 2.06 -91.67 -0.19 1.01 16 6 H 0.04 0.97 8.09 -51.93 -0.42 0.55 16 7 C -0.51 -13.09 5.94 -34.44 -0.20 -13.30 16 8 H 0.05 1.39 5.72 -52.49 -0.30 1.09 16 9 C 0.07 1.78 5.20 -17.82 -0.09 1.69 16 10 N -0.88 -24.60 12.20 55.43 0.68 -23.92 16 11 Si 0.88 20.74 29.55 -169.99 -5.02 15.72 16 12 H -0.28 -6.66 7.11 56.52 0.40 -6.26 16 13 H -0.29 -6.79 7.11 56.52 0.40 -6.39 16 14 H -0.28 -6.44 7.11 56.52 0.40 -6.04 16 15 C -0.10 -2.08 2.04 -90.55 -0.19 -2.27 16 16 H 0.06 1.26 8.14 -51.93 -0.42 0.83 16 17 C 0.07 1.43 5.95 37.12 0.22 1.65 16 18 O -0.40 -7.37 10.75 -35.23 -0.38 -7.75 16 19 C 0.07 1.06 6.84 37.26 0.25 1.31 16 20 C -0.15 -2.43 4.94 -26.63 -0.13 -2.56 16 21 C 0.10 1.85 1.51 -67.70 -0.10 1.75 16 22 H 0.05 1.05 6.54 -51.93 -0.34 0.71 16 23 H 0.06 0.86 6.35 -51.93 -0.33 0.53 16 24 H 0.06 0.84 8.11 -51.93 -0.42 0.42 16 25 H 0.02 0.28 8.14 -51.93 -0.42 -0.14 16 26 H 0.05 0.91 8.10 -51.93 -0.42 0.49 16 27 H 0.04 0.93 7.36 -51.93 -0.38 0.55 16 28 H 0.03 0.64 8.14 -51.93 -0.42 0.22 16 29 H 0.08 1.93 6.91 -51.93 -0.36 1.57 16 30 H 0.26 6.95 8.31 -40.82 -0.34 6.61 16 31 H 0.09 1.72 8.14 -51.93 -0.42 1.29 16 32 H 0.06 1.29 6.63 -51.93 -0.34 0.94 16 33 H 0.04 0.66 8.14 -51.93 -0.42 0.24 16 34 H 0.08 1.08 8.14 -51.93 -0.42 0.66 16 35 H 0.06 0.89 6.59 -51.93 -0.34 0.55 16 36 H 0.07 1.19 8.14 -51.93 -0.42 0.77 16 LS Contribution 268.55 15.07 4.05 4.05 Total: -1.00 -27.24 268.55 -7.61 -34.85 By element: Atomic # 1 Polarization: 4.94 SS G_CDS: -5.75 Total: -0.81 kcal Atomic # 6 Polarization: -10.75 SS G_CDS: -0.05 Total: -10.80 kcal Atomic # 7 Polarization: -34.81 SS G_CDS: -0.45 Total: -35.25 kcal Atomic # 8 Polarization: -7.37 SS G_CDS: -0.38 Total: -7.75 kcal Atomic # 14 Polarization: 20.74 SS G_CDS: -5.02 Total: 15.72 kcal Total LS contribution 4.05 Total: 4.05 kcal Total: -27.24 -7.61 -34.85 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260760346.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.062 kcal (2) G-P(sol) polarization free energy of solvation -27.240 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.302 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.605 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.845 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.907 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds