Wall clock time and date at job start Mon Mar 30 2020 03:10:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31514 * 1 3 3 Si 1.86800 * 120.00235 * 2 1 4 4 H 1.48495 * 109.47555 * 270.00498 * 3 2 1 5 5 H 1.48503 * 109.46814 * 30.00387 * 3 2 1 6 6 H 1.48496 * 109.47318 * 149.99879 * 3 2 1 7 7 C 1.37879 * 120.00338 * 180.02562 * 2 1 3 8 8 H 1.07999 * 120.00409 * 179.97438 * 7 2 1 9 9 C 1.50706 * 119.99394 * 359.97438 * 7 2 1 10 10 H 1.08996 * 110.51052 * 57.24312 * 9 7 2 11 11 O 1.43985 * 110.56805 * 180.02562 * 9 7 2 12 12 C 1.36527 * 105.47978 * 145.68523 * 11 9 7 13 13 C 1.38542 * 131.51230 * 162.71291 * 12 11 9 14 14 C 1.38239 * 120.04397 * 179.97438 * 13 12 11 15 15 C 1.38360 * 120.12526 * 0.05303 * 14 13 12 16 16 Cl 1.73603 * 119.93859 * 179.97438 * 15 14 13 17 17 C 1.38324 * 120.12013 * 359.97438 * 15 14 13 18 18 C 1.38549 * 120.01944 * 359.93916 * 17 15 14 19 19 O 1.36503 * 131.52023 * 180.02562 * 18 17 15 20 20 H 0.96996 * 119.99730 * 359.97438 * 1 2 3 21 21 H 1.07996 * 119.97985 * 359.97438 * 13 12 11 22 22 H 1.07999 * 119.93479 * 180.02562 * 14 13 12 23 23 H 1.08005 * 119.99202 * 179.97438 * 17 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3151 0.0000 0.0000 3 14 2.2492 1.6177 0.0000 4 1 2.4967 2.0465 -1.4000 5 1 1.4467 2.6526 0.7001 6 1 3.5467 1.4401 0.7000 7 6 2.0046 -1.1940 -0.0005 8 1 3.0846 -1.1940 -0.0010 9 6 1.2510 -2.4991 -0.0005 10 1 0.5814 -2.5535 -0.8588 11 8 2.1655 -3.6113 -0.0005 12 6 1.5575 -4.5830 0.7412 13 6 1.7894 -5.9455 0.8364 14 6 1.0166 -6.7218 1.6798 15 6 0.0095 -6.1410 2.4299 16 17 -0.9584 -7.1205 3.4870 17 6 -0.2275 -4.7812 2.3391 18 6 0.5448 -3.9977 1.4969 19 8 0.5180 -2.6596 1.2287 20 1 -0.4849 0.8400 0.0004 21 1 2.5743 -6.4016 0.2514 22 1 1.1991 -7.7838 1.7529 23 1 -1.0145 -4.3300 2.9253 RHF calculation, no. of doubly occupied orbitals= 37 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260021083.mol2 23 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:10:45 Heat of formation + Delta-G solvation = -51.602644 kcal Electronic energy + Delta-G solvation = -13001.896625 eV Core-core repulsion = 10420.892457 eV Total energy + Delta-G solvation = -2581.004168 eV No. of doubly occupied orbitals = 37 Molecular weight (most abundant/longest-lived isotopes) = 226.018 amu Computer time = 0.12 seconds Orbital eigenvalues (eV) -41.08258 -37.54593 -35.91316 -35.05240 -33.04315 -30.13628 -29.18813 -26.76877 -22.72334 -22.31850 -22.10835 -17.49364 -17.21238 -16.77313 -16.42170 -15.00794 -14.73022 -13.85529 -13.77425 -13.33249 -12.93488 -12.85708 -12.22477 -11.95157 -11.71450 -11.22801 -11.08905 -10.97635 -10.62949 -10.48041 -10.36672 -9.47853 -8.93147 -8.39374 -7.20016 -6.45537 -4.64940 1.50253 1.64536 2.30699 3.12808 3.19215 3.24089 3.79028 4.03687 4.17185 4.53237 5.01848 5.03978 5.34747 5.53517 5.81678 5.87440 6.30283 6.46055 6.55185 6.66622 6.77749 7.01477 7.49472 7.65348 8.14904 8.55457 9.09386 10.60211 Molecular weight = 226.02amu Principal moments of inertia in cm(-1) A = 0.059123 B = 0.006802 C = 0.006278 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 473.476399 B = 4115.676876 C = 4459.120226 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.860 5.860 2 C 0.079 3.921 3 Si 0.920 3.080 4 H -0.273 1.273 5 H -0.280 1.280 6 H -0.267 1.267 7 C -0.542 4.542 8 H 0.084 0.916 9 C 0.353 3.647 10 H 0.066 0.934 11 O -0.312 6.312 12 C 0.040 3.960 13 C -0.109 4.109 14 C -0.121 4.121 15 C -0.035 4.035 16 Cl -0.079 7.079 17 C -0.122 4.122 18 C 0.063 3.937 19 O -0.286 6.286 20 H 0.273 0.727 21 H 0.135 0.865 22 H 0.136 0.864 23 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.190 -9.768 2.869 10.183 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.494 5.494 2 C -0.130 4.130 3 Si 0.745 3.255 4 H -0.198 1.198 5 H -0.205 1.205 6 H -0.192 1.192 7 C -0.579 4.579 8 H 0.102 0.898 9 C 0.266 3.734 10 H 0.083 0.917 11 O -0.228 6.228 12 C -0.006 4.006 13 C -0.128 4.128 14 C -0.140 4.140 15 C -0.061 4.061 16 Cl -0.050 7.050 17 C -0.141 4.141 18 C 0.015 3.985 19 O -0.201 6.201 20 H 0.083 0.917 21 H 0.152 0.848 22 H 0.154 0.846 23 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -0.335 -9.494 2.932 9.942 hybrid contribution 0.171 0.861 0.075 0.881 sum -0.164 -8.633 3.008 9.143 Atomic orbital electron populations 1.69997 1.06333 1.28375 1.44687 1.25118 0.95099 1.00194 0.92577 0.86147 0.79761 0.80916 0.78662 1.19826 1.20521 1.19157 1.20987 0.94180 0.87663 1.55030 0.89810 1.23049 0.81944 0.85032 0.83417 0.91693 1.87441 1.43866 1.23682 1.67844 1.20196 0.93490 0.91446 0.95495 1.19828 1.02216 0.88978 1.01746 1.20509 0.95893 0.99927 0.97628 1.20208 0.96914 0.90893 0.98118 1.98328 1.71030 1.70328 1.65328 1.19713 1.01352 0.90643 1.02431 1.20167 0.95123 0.86681 0.96492 1.87995 1.72447 1.15610 1.44089 0.91703 0.84763 0.84635 0.84651 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.86 -24.13 13.11 55.43 0.73 -23.41 14 2 C 0.08 2.13 5.44 -17.82 -0.10 2.03 14 3 Si 0.92 20.39 29.54 -169.99 -5.02 15.37 14 4 H -0.27 -5.86 7.11 56.52 0.40 -5.46 14 5 H -0.28 -6.10 7.11 56.52 0.40 -5.70 14 6 H -0.27 -5.87 7.11 56.52 0.40 -5.46 14 7 C -0.54 -15.08 9.18 -34.44 -0.32 -15.39 14 8 H 0.08 2.28 7.81 -52.49 -0.41 1.87 14 9 C 0.35 9.43 3.93 36.01 0.14 9.57 14 10 H 0.07 1.78 8.14 -51.93 -0.42 1.35 14 11 O -0.31 -7.65 11.09 -45.78 -0.51 -8.16 14 12 C 0.04 0.86 7.15 -39.09 -0.28 0.58 14 13 C -0.11 -1.82 10.06 -39.47 -0.40 -2.22 14 14 C -0.12 -1.80 9.82 -39.54 -0.39 -2.19 14 15 C -0.03 -0.56 6.32 -39.50 -0.25 -0.81 14 16 Cl -0.08 -1.08 28.95 -51.86 -1.50 -2.58 14 17 C -0.12 -2.28 9.84 -39.43 -0.39 -2.67 14 18 C 0.06 1.42 7.15 -39.09 -0.28 1.14 14 19 O -0.29 -7.65 10.87 -45.70 -0.50 -8.14 14 20 H 0.27 7.11 8.31 -40.82 -0.34 6.77 14 21 H 0.13 1.88 8.06 -52.49 -0.42 1.46 14 22 H 0.14 1.58 8.06 -52.49 -0.42 1.16 14 23 H 0.14 2.36 8.06 -52.48 -0.42 1.94 14 LS Contribution 232.20 15.07 3.50 3.50 Total: -1.00 -28.64 232.20 -6.79 -35.43 By element: Atomic # 1 Polarization: -0.83 SS G_CDS: -1.24 Total: -2.07 kcal Atomic # 6 Polarization: -7.70 SS G_CDS: -2.25 Total: -9.95 kcal Atomic # 7 Polarization: -24.13 SS G_CDS: 0.73 Total: -23.41 kcal Atomic # 8 Polarization: -15.30 SS G_CDS: -1.00 Total: -16.30 kcal Atomic # 14 Polarization: 20.39 SS G_CDS: -5.02 Total: 15.37 kcal Atomic # 17 Polarization: -1.08 SS G_CDS: -1.50 Total: -2.58 kcal Total LS contribution 3.50 Total: 3.50 kcal Total: -28.64 -6.79 -35.43 kcal The number of atoms in the molecule is 23 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260021083.mol2 23 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.169 kcal (2) G-P(sol) polarization free energy of solvation -28.643 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.813 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.790 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.433 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.603 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.12 seconds