Wall clock time and date at job start Mon Mar 30 2020 02:47:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38048 * 119.99777 * 2 1 4 4 C 1.38845 * 120.02389 * 180.02562 * 3 2 1 5 5 O 1.35806 * 120.00280 * 179.97438 * 4 3 2 6 6 C 1.34814 * 116.99822 * 354.38226 * 5 4 3 7 7 H 1.08003 * 119.99908 * 5.06984 * 6 5 4 8 8 C 1.38615 * 120.00122 * 185.06499 * 6 5 4 9 9 N 1.31580 * 120.00229 * 180.02562 * 8 6 5 10 10 Si 1.86806 * 119.99924 * 0.02562 * 8 6 5 11 11 H 1.48497 * 109.46988 * 89.99754 * 10 8 6 12 12 H 1.48497 * 109.47359 * 210.00040 * 10 8 6 13 13 H 1.48502 * 109.47038 * 330.00070 * 10 8 6 14 14 C 1.39032 * 119.99817 * 359.97438 * 4 3 2 15 15 Cl 1.73602 * 120.00729 * 179.97438 * 14 4 3 16 16 C 1.38088 * 119.98318 * 0.02562 * 14 4 3 17 17 C 1.38939 * 119.98926 * 180.02562 * 2 1 3 18 18 N 1.39768 * 119.99927 * 0.02562 * 17 2 1 19 19 H 1.09004 * 109.46707 * 269.98104 * 1 2 3 20 20 H 1.09000 * 109.47249 * 29.97335 * 1 2 3 21 21 H 1.08987 * 109.47595 * 149.97845 * 1 2 3 22 22 H 1.08008 * 119.98969 * 0.02562 * 3 2 1 23 23 H 0.97002 * 120.00208 * 179.97438 * 9 8 6 24 24 H 1.08008 * 120.01012 * 180.25361 * 16 14 4 25 25 H 0.97005 * 119.99939 * 179.97438 * 18 17 2 26 26 H 0.96998 * 120.00010 * 359.97438 * 18 17 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1972 1.1956 0.0000 4 6 3.5856 1.1962 -0.0005 5 8 4.2642 2.3726 -0.0011 6 6 3.5344 3.5000 -0.1186 7 1 2.4557 3.4468 -0.1244 8 6 4.1684 4.7274 -0.2319 9 7 3.4562 5.8278 -0.3462 10 14 6.0342 4.8193 -0.2225 11 1 6.5423 4.7078 -1.6133 12 1 6.4630 6.1167 0.3588 13 1 6.5804 3.7061 0.5948 14 6 4.2813 -0.0076 -0.0005 15 17 6.0173 -0.0071 -0.0019 16 6 3.5910 -1.2035 -0.0005 17 6 2.2014 -1.2034 -0.0005 18 7 1.5024 -2.4137 -0.0016 19 1 -0.3633 -0.0003 1.0277 20 1 -0.3634 0.8902 -0.5134 21 1 -0.3634 -0.8897 -0.5141 22 1 1.6569 2.1308 0.0004 23 1 3.8999 6.6868 -0.4251 24 1 4.1310 -2.1389 0.0036 25 1 1.9872 -3.2538 -0.0024 26 1 0.5324 -2.4135 -0.0016 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000306357727.mol2 26 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:47:09 Heat of formation + Delta-G solvation = -12.000746 kcal Electronic energy + Delta-G solvation = -13316.306023 eV Core-core repulsion = 10807.426306 eV Total energy + Delta-G solvation = -2508.879717 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 227.045 amu Computer time = 0.18 seconds Orbital eigenvalues (eV) -39.40820 -37.28286 -35.80196 -33.26552 -32.24944 -31.79596 -27.79891 -26.50972 -24.74391 -21.88227 -20.51455 -18.08998 -17.15579 -16.61222 -15.94057 -14.54004 -14.16730 -13.91200 -13.78116 -13.28439 -13.13115 -12.47444 -12.23338 -12.21275 -11.98815 -11.29708 -11.15540 -10.89348 -10.83118 -10.31868 -10.05913 -9.44374 -9.35880 -8.63461 -8.06542 -6.64240 -6.36108 -4.00603 1.80956 2.29545 2.92647 3.28475 3.32853 3.50650 4.29844 4.31699 4.33658 4.84201 5.13269 5.32093 5.42340 5.68772 5.89009 6.02568 6.05026 6.34800 6.46482 6.60836 6.75130 7.12248 7.29242 7.73606 7.90453 8.06686 8.12820 8.99893 9.61122 10.71547 Molecular weight = 227.05amu Principal moments of inertia in cm(-1) A = 0.029418 B = 0.010119 C = 0.007564 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 951.570022 B = 2766.417897 C = 3700.737123 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 C -0.111 4.111 3 C -0.167 4.167 4 C 0.128 3.872 5 O -0.208 6.208 6 C -0.387 4.387 7 H 0.105 0.895 8 C 0.065 3.935 9 N -0.882 5.882 10 Si 0.899 3.101 11 H -0.273 1.273 12 H -0.284 1.284 13 H -0.255 1.255 14 C -0.066 4.066 15 Cl -0.084 7.084 16 C -0.142 4.142 17 C 0.144 3.856 18 N -0.887 5.887 19 H 0.063 0.937 20 H 0.066 0.934 21 H 0.055 0.945 22 H 0.143 0.857 23 H 0.278 0.722 24 H 0.122 0.878 25 H 0.390 0.610 26 H 0.392 0.608 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.623 -12.835 0.588 13.114 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C -0.116 4.116 3 C -0.187 4.187 4 C 0.074 3.926 5 O -0.114 6.114 6 C -0.463 4.463 7 H 0.122 0.878 8 C -0.137 4.137 9 N -0.521 5.521 10 Si 0.725 3.275 11 H -0.199 1.199 12 H -0.210 1.210 13 H -0.178 1.178 14 C -0.094 4.094 15 Cl -0.055 7.055 16 C -0.165 4.165 17 C 0.043 3.957 18 N -0.432 5.432 19 H 0.082 0.918 20 H 0.085 0.915 21 H 0.074 0.926 22 H 0.160 0.840 23 H 0.088 0.912 24 H 0.140 0.860 25 H 0.217 0.783 26 H 0.220 0.780 Dipole moment (debyes) X Y Z Total from point charges -2.178 -12.440 0.587 12.643 hybrid contribution 0.632 -0.083 -0.042 0.638 sum -1.546 -12.523 0.545 12.630 Atomic orbital electron populations 1.20582 0.91853 1.01966 1.01578 1.19190 0.95263 0.91353 1.05777 1.20951 0.92876 0.98207 1.06673 1.18570 0.90138 0.85919 0.97936 1.83660 1.35283 1.11410 1.81003 1.20713 0.92499 0.81649 1.51450 0.87793 1.24393 1.00119 0.93626 0.95607 1.69656 1.36374 0.98064 1.47978 0.86253 0.83936 0.77952 0.79390 1.19885 1.20955 1.17844 1.19646 0.83343 0.92175 1.14236 1.98296 1.10933 1.98921 1.97353 1.19910 0.91834 0.95897 1.08884 1.17027 0.90113 0.86087 1.02516 1.42177 1.08131 1.04496 1.88392 0.91821 0.91468 0.92578 0.83998 0.91160 0.85969 0.78336 0.77977 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.39 9.57 36.00 0.34 -1.05 15 2 C -0.11 -1.95 5.90 -104.43 -0.62 -2.56 15 3 C -0.17 -3.54 8.81 -39.43 -0.35 -3.88 15 4 C 0.13 2.97 6.64 -39.06 -0.26 2.71 15 5 O -0.21 -5.54 8.04 -0.08 0.00 -5.54 15 6 C -0.39 -10.91 9.94 30.87 0.31 -10.61 15 7 H 0.10 2.95 5.43 -52.48 -0.29 2.67 15 8 C 0.07 1.85 5.49 -17.52 -0.10 1.76 15 9 N -0.88 -25.62 13.96 55.48 0.77 -24.85 15 10 Si 0.90 22.22 28.62 -169.99 -4.86 17.36 15 11 H -0.27 -6.66 7.11 56.52 0.40 -6.26 15 12 H -0.28 -6.74 7.11 56.52 0.40 -6.34 15 13 H -0.25 -6.37 7.11 56.52 0.40 -5.97 15 14 C -0.07 -1.35 6.33 -39.34 -0.25 -1.60 15 15 Cl -0.08 -1.65 28.50 -51.86 -1.48 -3.13 15 16 C -0.14 -2.46 9.67 -39.37 -0.38 -2.84 15 17 C 0.14 2.33 6.74 -83.71 -0.56 1.76 15 18 N -0.89 -10.46 8.99 32.44 0.29 -10.17 15 19 H 0.06 0.79 8.14 -51.93 -0.42 0.37 15 20 H 0.07 0.91 8.08 -51.93 -0.42 0.49 15 21 H 0.06 0.62 6.54 -51.94 -0.34 0.28 15 22 H 0.14 3.12 5.63 -52.48 -0.30 2.82 15 23 H 0.28 7.50 8.31 -40.82 -0.34 7.16 15 24 H 0.12 1.80 8.06 -52.48 -0.42 1.38 15 25 H 0.39 3.77 8.84 -40.82 -0.36 3.41 15 26 H 0.39 3.90 6.81 -40.82 -0.28 3.62 15 LS Contribution 244.38 15.07 3.68 3.68 Total: -1.00 -29.91 244.38 -5.41 -35.33 By element: Atomic # 1 Polarization: 5.59 SS G_CDS: -1.96 Total: 3.63 kcal Atomic # 6 Polarization: -14.45 SS G_CDS: -1.86 Total: -16.32 kcal Atomic # 7 Polarization: -36.08 SS G_CDS: 1.07 Total: -35.01 kcal Atomic # 8 Polarization: -5.54 SS G_CDS: 0.00 Total: -5.54 kcal Atomic # 14 Polarization: 22.22 SS G_CDS: -4.86 Total: 17.36 kcal Atomic # 17 Polarization: -1.65 SS G_CDS: -1.48 Total: -3.13 kcal Total LS contribution 3.68 Total: 3.68 kcal Total: -29.91 -5.41 -35.33 kcal The number of atoms in the molecule is 26 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000306357727.mol2 26 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.326 kcal (2) G-P(sol) polarization free energy of solvation -29.913 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.587 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.414 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.327 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.001 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.19 seconds