Wall clock time and date at job start Mon Mar 30 2020 02:58:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35775 * 116.99833 * 2 1 4 4 C 1.38974 * 120.22236 * 270.27163 * 3 2 1 5 5 N 1.40083 * 119.95652 * 0.02562 * 4 3 2 6 6 C 1.38826 * 120.08454 * 180.25902 * 4 3 2 7 7 C 1.38758 * 120.54041 * 359.74025 * 6 4 3 8 8 C 1.37586 * 120.44751 * 359.97438 * 7 6 4 9 9 Cl 1.73593 * 120.05275 * 179.97438 * 8 7 6 10 10 C 1.40973 * 119.89548 * 0.02562 * 8 7 6 11 11 C 1.41146 * 120.26171 * 179.97438 * 10 8 7 12 12 H 1.08007 * 119.99584 * 39.40906 * 11 10 8 13 13 C 1.39911 * 120.00018 * 219.13178 * 11 10 8 14 14 N 1.30882 * 120.00110 * 20.38790 * 13 11 10 15 15 Si 1.86807 * 119.99916 * 200.38595 * 13 11 10 16 16 H 1.48499 * 109.47182 * 59.99929 * 15 13 11 17 17 H 1.48503 * 109.46917 * 180.02562 * 15 13 11 18 18 H 1.48503 * 109.47100 * 299.99748 * 15 13 11 19 19 H 1.08993 * 109.47198 * 60.00578 * 1 2 3 20 20 H 1.08999 * 109.46975 * 179.97438 * 1 2 3 21 21 H 1.08998 * 109.47282 * 300.00290 * 1 2 3 22 22 H 0.97000 * 120.00168 * 180.23757 * 5 4 3 23 23 H 0.97002 * 119.99947 * 0.23290 * 5 4 3 24 24 H 1.08001 * 119.73110 * 179.72165 * 6 4 3 25 25 H 1.08002 * 119.78196 * 180.02562 * 7 6 4 26 26 H 0.97000 * 120.00124 * 183.41936 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0453 1.2098 0.0000 4 6 2.3578 1.8357 -1.2008 5 7 2.0360 1.2178 -2.4162 6 6 2.9929 3.0701 -1.1975 7 6 3.3168 3.6932 -0.0008 8 6 3.0124 3.0962 1.2008 9 17 3.4229 3.8846 2.6919 10 6 2.3676 1.8427 1.2192 11 6 2.0522 1.2230 2.4475 12 1 1.6920 1.8164 3.2749 13 6 2.2007 -0.1608 2.5913 14 7 2.9813 -0.8234 1.7761 15 14 1.2850 -1.0625 3.9471 16 1 -0.1770 -0.8755 3.7660 17 1 1.6107 -2.5101 3.8862 18 1 1.6939 -0.5187 5.2671 19 1 -0.3633 0.5137 -0.8900 20 1 -0.3633 -1.0277 -0.0005 21 1 -0.3634 0.5139 0.8899 22 1 2.2569 1.6525 -3.2547 23 1 1.5922 0.3553 -2.4192 24 1 3.2371 3.5493 -2.1341 25 1 3.8104 4.6538 -0.0125 26 1 3.0459 -1.7889 1.8441 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000575715701.mol2 26 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:58:37 Heat of formation + Delta-G solvation = -25.253984 kcal Electronic energy + Delta-G solvation = -13921.258966 eV Core-core repulsion = 11411.804545 eV Total energy + Delta-G solvation = -2509.454421 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 227.045 amu Computer time = 0.18 seconds Orbital eigenvalues (eV) -38.53572 -35.84849 -34.93176 -33.88038 -32.49699 -29.45274 -27.36217 -25.76909 -24.79422 -21.10105 -20.40520 -17.50349 -16.53771 -15.85785 -15.27965 -14.71424 -14.17658 -13.90761 -13.68903 -12.85611 -12.66490 -12.04171 -11.63216 -11.30445 -11.08183 -11.01463 -10.79870 -10.57795 -10.27806 -10.17177 -9.38668 -9.05030 -8.85245 -8.45839 -7.24515 -6.69631 -6.28824 -4.33972 2.69672 2.85367 3.13405 3.16670 3.22173 3.79005 4.04295 4.58354 4.84911 5.13939 5.55739 6.11249 6.18864 6.25885 6.46396 6.50934 6.84064 7.00155 7.24180 7.35356 7.56580 7.68894 7.86942 8.30832 8.41859 8.62700 8.75018 8.89910 9.25862 10.32261 Molecular weight = 227.05amu Principal moments of inertia in cm(-1) A = 0.021915 B = 0.015686 C = 0.009970 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1277.345200 B = 1784.605407 C = 2807.711794 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.288 6.288 3 C -0.039 4.039 4 C 0.218 3.782 5 N -0.886 5.886 6 C -0.290 4.290 7 C -0.049 4.049 8 C -0.152 4.152 9 Cl -0.118 7.118 10 C 0.144 3.856 11 C -0.460 4.460 12 H 0.083 0.917 13 C 0.096 3.904 14 N -0.747 5.747 15 Si 0.892 3.108 16 H -0.265 1.265 17 H -0.279 1.279 18 H -0.266 1.266 19 H 0.020 0.980 20 H 0.065 0.935 21 H 0.039 0.961 22 H 0.384 0.616 23 H 0.392 0.608 24 H 0.099 0.901 25 H 0.101 0.899 26 H 0.280 0.720 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.931 1.250 -3.364 4.633 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.203 6.203 3 C -0.089 4.089 4 C 0.115 3.885 5 N -0.426 5.426 6 C -0.314 4.314 7 C -0.069 4.069 8 C -0.180 4.180 9 Cl -0.090 7.090 10 C 0.139 3.861 11 C -0.488 4.488 12 H 0.101 0.899 13 C -0.127 4.127 14 N -0.369 5.369 15 Si 0.716 3.284 16 H -0.190 1.190 17 H -0.204 1.204 18 H -0.191 1.191 19 H 0.039 0.961 20 H 0.084 0.916 21 H 0.057 0.943 22 H 0.210 0.790 23 H 0.219 0.781 24 H 0.117 0.883 25 H 0.119 0.881 26 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -2.637 0.933 -3.195 4.247 hybrid contribution -0.622 -0.420 0.333 0.821 sum -3.259 0.513 -2.862 4.367 Atomic orbital electron populations 1.22767 0.84810 1.00154 0.99058 1.86224 1.15448 1.24999 1.93616 1.17772 1.10383 0.91259 0.89458 1.17967 0.93816 0.91289 0.85427 1.42313 1.70777 1.24830 1.04706 1.19579 1.17383 0.98092 0.96326 1.20212 0.98064 0.97744 0.90858 1.20597 1.13700 0.99544 0.84155 1.98196 1.93195 1.80311 1.37308 1.17353 0.87568 0.88057 0.93093 1.19238 1.39572 0.92336 0.97650 0.89896 1.25626 0.93117 0.97484 0.96451 1.69755 1.25404 1.09299 1.32464 0.86642 0.81190 0.78449 0.82109 1.18995 1.20437 1.19116 0.96127 0.91607 0.94258 0.78977 0.78088 0.88304 0.88119 0.90884 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.56 11.13 101.05 1.12 1.68 15 2 O -0.29 -6.85 6.56 -19.04 -0.12 -6.98 15 3 C -0.04 -0.97 5.23 -38.22 -0.20 -1.17 15 4 C 0.22 4.86 6.76 -83.60 -0.57 4.29 15 5 N -0.89 -15.89 9.09 32.49 0.30 -15.59 15 6 C -0.29 -6.23 9.88 -39.17 -0.39 -6.62 15 7 C -0.05 -1.09 9.79 -39.63 -0.39 -1.48 15 8 C -0.15 -3.71 6.37 -38.78 -0.25 -3.95 15 9 Cl -0.12 -2.64 27.83 -51.86 -1.44 -4.09 15 10 C 0.14 3.76 5.37 -106.67 -0.57 3.19 15 11 C -0.46 -12.09 8.10 -37.85 -0.31 -12.40 15 12 H 0.08 2.16 7.58 -52.48 -0.40 1.77 15 13 C 0.10 2.43 4.39 -17.33 -0.08 2.35 15 14 N -0.75 -19.61 11.26 55.55 0.63 -18.98 15 15 Si 0.89 19.01 29.61 -169.99 -5.03 13.97 15 16 H -0.27 -5.56 7.11 56.52 0.40 -5.16 15 17 H -0.28 -5.81 7.11 56.52 0.40 -5.41 15 18 H -0.27 -5.66 7.11 56.52 0.40 -5.26 15 19 H 0.02 0.37 8.14 -51.93 -0.42 -0.05 15 20 H 0.07 1.15 8.14 -51.93 -0.42 0.73 15 21 H 0.04 0.82 8.14 -51.93 -0.42 0.40 15 22 H 0.38 5.71 8.84 -40.82 -0.36 5.35 15 23 H 0.39 6.78 8.19 -40.82 -0.33 6.45 15 24 H 0.10 1.85 8.06 -52.49 -0.42 1.43 15 25 H 0.10 1.98 8.06 -52.49 -0.42 1.55 15 26 H 0.28 6.83 8.30 -40.82 -0.34 6.49 15 LS Contribution 246.14 15.07 3.71 3.71 Total: -1.00 -27.85 246.14 -5.93 -33.78 By element: Atomic # 1 Polarization: 10.62 SS G_CDS: -2.34 Total: 8.28 kcal Atomic # 6 Polarization: -12.48 SS G_CDS: -1.62 Total: -14.10 kcal Atomic # 7 Polarization: -35.50 SS G_CDS: 0.92 Total: -34.58 kcal Atomic # 8 Polarization: -6.85 SS G_CDS: -0.12 Total: -6.98 kcal Atomic # 14 Polarization: 19.01 SS G_CDS: -5.03 Total: 13.97 kcal Atomic # 17 Polarization: -2.64 SS G_CDS: -1.44 Total: -4.09 kcal Total LS contribution 3.71 Total: 3.71 kcal Total: -27.85 -5.93 -33.78 kcal The number of atoms in the molecule is 26 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000575715701.mol2 26 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.526 kcal (2) G-P(sol) polarization free energy of solvation -27.851 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.325 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.929 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.780 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.254 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.18 seconds