Wall clock time and date at job start Mon Mar 30 2020 03:25:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.50699 * 115.55814 * 2 1 4 4 O 1.20831 * 119.99736 * 214.30022 * 3 2 1 5 5 O 1.34223 * 120.00242 * 34.30256 * 3 2 1 6 6 C 1.53000 * 117.49776 * 145.69038 * 2 1 3 7 7 C 1.52997 * 117.49537 * 214.31493 * 2 1 3 8 8 H 1.08999 * 117.49685 * 145.02116 * 7 2 1 9 9 C 1.50696 * 117.52180 * 359.97438 * 7 2 1 10 10 O 1.21290 * 119.99779 * 359.97438 * 9 7 2 11 11 N 1.34773 * 120.00368 * 179.97438 * 9 7 2 12 12 C 1.46501 * 120.00348 * 180.02562 * 11 9 7 13 13 C 1.50702 * 109.47258 * 180.02562 * 12 11 9 14 14 H 1.08000 * 120.00176 * 0.02562 * 13 12 11 15 15 C 1.37877 * 120.00130 * 180.02562 * 13 12 11 16 16 N 1.31510 * 119.99704 * 359.97438 * 15 13 12 17 17 Si 1.86792 * 120.00072 * 180.02562 * 15 13 12 18 18 H 1.48497 * 109.47131 * 359.97438 * 17 15 13 19 19 H 1.48499 * 109.47305 * 120.00065 * 17 15 13 20 20 H 1.48506 * 109.47297 * 239.99903 * 17 15 13 21 21 H 1.09005 * 109.46967 * 325.69988 * 1 2 3 22 22 H 1.09000 * 109.47392 * 85.70102 * 1 2 3 23 23 H 1.09004 * 109.46938 * 205.70618 * 1 2 3 24 24 H 0.96703 * 117.00307 * 180.02562 * 5 3 2 25 25 H 1.08990 * 117.49990 * 359.97438 * 6 2 1 26 26 H 1.09004 * 117.49237 * 214.97568 * 6 2 1 27 27 H 0.97001 * 119.99539 * 0.02562 * 11 9 7 28 28 H 1.09000 * 109.47199 * 300.00775 * 12 11 9 29 29 H 1.09004 * 109.46685 * 60.00739 * 12 11 9 30 30 H 0.97002 * 120.00018 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.1802 1.3595 0.0000 4 8 3.2207 1.5316 -0.5897 5 8 1.6035 2.3793 0.6551 6 6 2.2365 -1.1210 0.7650 7 6 2.2364 -1.1209 -0.7651 8 1 3.1715 -0.8751 -1.2684 9 6 1.3724 -2.1411 -1.4606 10 8 0.1641 -2.0545 -1.4005 11 7 1.9423 -3.1496 -2.1496 12 6 1.1023 -4.1410 -2.8262 13 6 1.9784 -5.1538 -3.5175 14 1 3.0534 -5.0678 -3.4583 15 6 1.4077 -6.1901 -4.2254 16 7 0.0987 -6.2950 -4.2970 17 14 2.4936 -7.4459 -5.0816 18 1 3.9205 -7.1066 -4.8494 19 1 2.2108 -8.7981 -4.5369 20 1 2.2127 -7.4310 -6.5398 21 1 -0.3633 0.8490 0.5792 22 1 -0.3634 0.0770 -1.0247 23 1 -0.3633 -0.9260 0.4458 24 1 2.0577 3.2325 0.6262 25 1 1.6113 -1.8582 1.2686 26 1 3.1716 -0.8751 1.2682 27 1 2.9086 -3.2189 -2.1973 28 1 0.4733 -4.6454 -2.0928 29 1 0.4728 -3.6417 -3.5628 30 1 -0.3029 -7.0243 -4.7948 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000713614618.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:25:34 Heat of formation + Delta-G solvation = -111.281842 kcal Electronic energy + Delta-G solvation = -15358.126516 eV Core-core repulsion = 12540.065578 eV Total energy + Delta-G solvation = -2818.060939 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 227.099 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -40.81088 -39.16986 -36.66674 -35.97524 -34.17160 -32.36001 -28.99172 -27.35228 -24.86195 -23.98054 -22.09482 -20.43588 -19.35122 -17.99567 -17.15515 -16.71899 -15.75052 -15.49901 -15.09240 -14.52637 -14.29858 -13.88575 -13.21267 -12.94081 -12.47104 -12.28695 -12.17991 -11.92801 -11.81003 -11.65225 -10.95935 -10.94445 -10.75802 -10.32112 -10.31189 -10.14977 -9.39955 -8.96845 -8.76034 -7.92397 -6.18701 -4.25507 1.94156 2.72226 3.02668 3.22949 3.30274 3.33431 3.79494 4.03977 4.34590 4.45496 4.76770 4.96024 5.11052 5.17916 5.42735 5.59473 5.70603 5.91541 6.01323 6.11856 6.31843 6.58532 7.26667 7.39033 7.48198 7.64381 7.76190 7.94323 8.58157 8.74759 9.04120 9.41233 10.91579 Molecular weight = 227.10amu Principal moments of inertia in cm(-1) A = 0.059529 B = 0.005114 C = 0.004886 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 470.242820 B = 5473.529960 C = 5729.637731 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 C -0.113 4.113 3 C 0.519 3.481 4 O -0.515 6.515 5 O -0.508 6.508 6 C -0.119 4.119 7 C -0.150 4.150 8 H 0.133 0.867 9 C 0.527 3.473 10 O -0.547 6.547 11 N -0.704 5.704 12 C 0.249 3.751 13 C -0.544 4.544 14 H 0.064 0.936 15 C 0.064 3.936 16 N -0.886 5.886 17 Si 0.904 3.096 18 H -0.272 1.272 19 H -0.282 1.282 20 H -0.282 1.282 21 H 0.058 0.942 22 H 0.074 0.926 23 H 0.078 0.922 24 H 0.409 0.591 25 H 0.117 0.883 26 H 0.108 0.892 27 H 0.392 0.608 28 H 0.028 0.972 29 H 0.028 0.972 30 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.466 12.388 9.874 16.459 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.115 4.115 3 C 0.362 3.638 4 O -0.404 6.404 5 O -0.319 6.319 6 C -0.156 4.156 7 C -0.171 4.171 8 H 0.151 0.849 9 C 0.311 3.689 10 O -0.427 6.427 11 N -0.351 5.351 12 C 0.129 3.871 13 C -0.582 4.582 14 H 0.082 0.918 15 C -0.140 4.140 16 N -0.523 5.523 17 Si 0.731 3.269 18 H -0.196 1.196 19 H -0.208 1.208 20 H -0.208 1.208 21 H 0.077 0.923 22 H 0.093 0.907 23 H 0.097 0.903 24 H 0.268 0.732 25 H 0.135 0.865 26 H 0.126 0.874 27 H 0.225 0.775 28 H 0.046 0.954 29 H 0.046 0.954 30 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges 3.518 11.957 9.653 15.765 hybrid contribution 1.410 -0.138 -0.666 1.565 sum 4.928 11.819 8.987 15.644 Atomic orbital electron populations 1.21336 0.87938 1.02580 1.03649 1.20898 0.97731 0.84815 1.08017 1.22214 0.81773 0.85688 0.74136 1.90716 1.23735 1.84088 1.41834 1.84509 1.55685 1.22215 1.69488 1.23210 1.02046 0.97852 0.92525 1.22539 1.01628 0.97284 0.95666 0.84907 1.19308 0.87915 0.81898 0.79784 1.90672 1.14263 1.75286 1.62457 1.46414 1.10891 1.27037 1.50790 1.19150 0.90535 0.85375 0.92044 1.21268 0.93226 1.10439 1.33252 0.91777 1.24946 0.95146 0.97793 0.96100 1.69981 1.09404 1.31908 1.41024 0.86352 0.80416 0.80874 0.79229 1.19605 1.20779 1.20788 0.92337 0.90731 0.90321 0.73201 0.86457 0.87402 0.77479 0.95370 0.95394 0.92479 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.39 8.06 37.16 0.30 -1.09 16 2 C -0.11 -1.54 2.64 -155.66 -0.41 -1.95 16 3 C 0.52 6.68 7.87 36.01 0.28 6.96 16 4 O -0.52 -7.85 17.02 -18.75 -0.32 -8.17 16 5 O -0.51 -4.88 12.69 -39.24 -0.50 -5.38 16 6 C -0.12 -1.43 9.58 -26.73 -0.26 -1.68 16 7 C -0.15 -2.24 5.70 -91.77 -0.52 -2.76 16 8 H 0.13 1.88 7.67 -51.93 -0.40 1.48 16 9 C 0.53 10.26 7.59 -10.99 -0.08 10.17 16 10 O -0.55 -12.27 13.11 5.55 0.07 -12.19 16 11 N -0.70 -14.66 5.55 -61.47 -0.34 -15.01 16 12 C 0.25 6.51 5.43 -5.19 -0.03 6.49 16 13 C -0.54 -14.64 9.28 -34.44 -0.32 -14.96 16 14 H 0.06 1.62 7.60 -52.49 -0.40 1.23 16 15 C 0.06 1.76 5.46 -17.82 -0.10 1.66 16 16 N -0.89 -25.90 13.29 55.43 0.74 -25.16 16 17 Si 0.90 20.76 29.54 -169.99 -5.02 15.74 16 18 H -0.27 -6.05 7.11 56.52 0.40 -5.65 16 19 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 20 H -0.28 -6.44 7.11 56.52 0.40 -6.04 16 21 H 0.06 0.70 7.49 -51.93 -0.39 0.31 16 22 H 0.07 1.20 7.26 -51.93 -0.38 0.83 16 23 H 0.08 1.18 7.02 -51.93 -0.36 0.82 16 24 H 0.41 1.98 9.10 45.56 0.41 2.39 16 25 H 0.12 1.37 8.05 -51.93 -0.42 0.95 16 26 H 0.11 1.06 8.14 -51.93 -0.42 0.64 16 27 H 0.39 7.10 8.32 -40.82 -0.34 6.76 16 28 H 0.03 0.81 8.14 -51.93 -0.42 0.38 16 29 H 0.03 0.81 8.14 -51.93 -0.42 0.39 16 30 H 0.27 7.26 8.31 -40.82 -0.34 6.92 16 LS Contribution 269.36 15.07 4.06 4.06 Total: -1.00 -32.76 269.36 -5.12 -37.88 By element: Atomic # 1 Polarization: 8.07 SS G_CDS: -2.67 Total: 5.40 kcal Atomic # 6 Polarization: 3.97 SS G_CDS: -1.14 Total: 2.84 kcal Atomic # 7 Polarization: -40.56 SS G_CDS: 0.40 Total: -40.17 kcal Atomic # 8 Polarization: -25.00 SS G_CDS: -0.74 Total: -25.75 kcal Atomic # 14 Polarization: 20.76 SS G_CDS: -5.02 Total: 15.74 kcal Total LS contribution 4.06 Total: 4.06 kcal Total: -32.76 -5.12 -37.88 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000713614618.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.399 kcal (2) G-P(sol) polarization free energy of solvation -32.763 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.162 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.120 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.883 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.282 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds