Wall clock time and date at job start Mon Mar 30 2020 03:00:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 N 1.30496 * 125.72254 * 2 1 4 4 C 1.34163 * 109.36738 * 179.97438 * 3 2 1 5 5 C 1.34631 * 108.21845 * 0.02562 * 4 3 2 6 6 N 1.35944 * 125.72749 * 180.02562 * 2 1 3 7 7 C 1.39679 * 126.48371 * 0.02562 * 6 2 1 8 8 C 1.39380 * 119.82607 * 309.73261 * 7 6 2 9 9 C 1.36419 * 120.17931 * 179.71968 * 8 7 6 10 10 C 1.40840 * 119.81294 * 0.52602 * 9 8 7 11 11 C 1.41189 * 120.16906 * 179.72559 * 10 9 8 12 12 H 1.08007 * 120.00278 * 155.15641 * 11 10 9 13 13 C 1.39928 * 120.00234 * 335.15457 * 11 10 9 14 14 N 1.30859 * 119.99675 * 342.16649 * 13 11 10 15 15 Si 1.86797 * 120.00410 * 162.16460 * 13 11 10 16 16 H 1.48497 * 109.47533 * 94.65466 * 15 13 11 17 17 H 1.48503 * 109.47239 * 214.65805 * 15 13 11 18 18 H 1.48507 * 109.46955 * 334.65798 * 15 13 11 19 19 C 1.40843 * 119.66256 * 359.74793 * 10 9 8 20 20 C 1.36416 * 119.81527 * 359.97438 * 19 10 9 21 21 H 1.08995 * 109.47333 * 269.99707 * 1 2 3 22 22 H 1.09005 * 109.47216 * 30.00208 * 1 2 3 23 23 H 1.09004 * 109.46710 * 149.99742 * 1 2 3 24 24 H 1.08006 * 125.89030 * 179.97438 * 4 3 2 25 25 H 1.07997 * 126.58366 * 180.25719 * 5 4 3 26 26 H 1.08007 * 119.90877 * 359.97438 * 8 7 6 27 27 H 1.07996 * 120.09087 * 180.27639 * 9 8 7 28 28 H 0.97001 * 120.00082 * 179.97438 * 14 13 11 29 29 H 1.07997 * 120.09598 * 179.97438 * 19 10 9 30 30 H 1.07999 * 119.91526 * 180.02562 * 20 19 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2689 1.0594 0.0000 4 6 3.5562 0.6816 0.0006 5 6 3.6000 -0.6640 0.0004 6 7 2.3008 -1.1036 -0.0005 7 6 1.8740 -2.4336 -0.0016 8 6 0.9260 -2.8582 0.9277 9 6 0.4998 -4.1542 0.9294 10 6 1.0289 -5.0664 -0.0041 11 6 0.5975 -6.4108 -0.0053 12 1 0.6654 -6.9990 -0.9086 13 6 0.0820 -6.9813 1.1638 14 7 0.3111 -6.4181 2.3226 15 14 -0.9332 -8.5465 1.0705 16 1 -0.0540 -9.7212 1.2990 17 1 -1.9931 -8.5118 2.1100 18 1 -1.5596 -8.6509 -0.2720 19 6 1.9908 -4.6309 -0.9362 20 6 2.4024 -3.3304 -0.9286 21 1 -0.3634 -0.0001 1.0276 22 1 -0.3634 0.8900 -0.5139 23 1 -0.3633 -0.8900 -0.5139 24 1 4.4101 1.3429 0.0003 25 1 4.4876 -1.2791 0.0046 26 1 0.5245 -2.1583 1.6457 27 1 -0.2381 -4.4805 1.6472 28 1 -0.0465 -6.8133 3.1331 29 1 2.4015 -5.3246 -1.6548 30 1 3.1397 -2.9946 -1.6429 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000214887370.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:00:54 Heat of formation + Delta-G solvation = 70.346959 kcal Electronic energy + Delta-G solvation = -14835.705454 eV Core-core repulsion = 12403.236634 eV Total energy + Delta-G solvation = -2432.468819 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 228.096 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -41.52713 -37.80185 -34.38529 -32.52315 -31.33886 -29.74205 -29.05701 -26.46231 -25.18584 -21.91171 -21.47225 -20.21350 -19.09007 -17.62784 -17.03534 -15.56807 -14.90195 -14.30628 -13.95020 -13.77949 -13.33761 -12.92199 -12.57568 -12.48602 -12.16797 -12.05382 -11.83244 -11.61457 -11.29642 -11.15685 -10.87731 -10.13827 -9.84173 -9.63104 -9.35685 -9.18425 -7.90617 -7.86367 -7.46653 -7.07043 -4.64862 2.15743 2.74647 2.79779 2.92215 2.96332 3.06438 3.62791 3.64592 3.71419 4.29541 5.01198 5.33568 5.49865 5.79368 5.80997 5.89899 5.93176 6.02476 6.23518 6.29075 6.58084 6.68052 6.76731 6.86966 7.07083 7.23676 7.26536 7.34379 7.71127 7.71672 7.90711 8.13373 8.31207 8.55187 8.61873 8.68047 9.85551 Molecular weight = 228.10amu Principal moments of inertia in cm(-1) A = 0.054672 B = 0.006256 C = 0.005975 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 512.019823 B = 4474.401608 C = 4684.929695 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 C 0.194 3.806 3 N -0.506 5.506 4 C -0.048 4.048 5 C -0.057 4.057 6 N -0.365 5.365 7 C -0.056 4.056 8 C -0.079 4.079 9 C -0.159 4.159 10 C 0.116 3.884 11 C -0.445 4.445 12 H 0.084 0.916 13 C 0.074 3.926 14 N -0.778 5.778 15 Si 0.913 3.087 16 H -0.268 1.268 17 H -0.272 1.272 18 H -0.258 1.258 19 C -0.218 4.218 20 C -0.069 4.069 21 H 0.073 0.927 22 H 0.079 0.921 23 H 0.077 0.923 24 H 0.162 0.838 25 H 0.165 0.835 26 H 0.095 0.905 27 H 0.125 0.875 28 H 0.286 0.714 29 H 0.102 0.898 30 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.235 2.512 -1.608 2.992 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 C -0.067 4.067 3 N -0.225 5.225 4 C -0.197 4.197 5 C -0.192 4.192 6 N -0.040 5.040 7 C -0.147 4.147 8 C -0.099 4.099 9 C -0.179 4.179 10 C 0.113 3.887 11 C -0.473 4.473 12 H 0.102 0.898 13 C -0.147 4.147 14 N -0.401 5.401 15 Si 0.736 3.264 16 H -0.193 1.193 17 H -0.197 1.197 18 H -0.181 1.181 19 C -0.238 4.238 20 C -0.088 4.088 21 H 0.091 0.909 22 H 0.098 0.902 23 H 0.096 0.904 24 H 0.179 0.821 25 H 0.182 0.818 26 H 0.113 0.887 27 H 0.143 0.857 28 H 0.097 0.903 29 H 0.120 0.880 30 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -0.607 3.138 -1.340 3.466 hybrid contribution 0.211 -1.566 0.156 1.588 sum -0.396 1.572 -1.185 2.008 Atomic orbital electron populations 1.20102 0.85573 1.03456 1.02896 1.23408 0.95522 0.81366 1.06384 1.70121 1.02185 1.28559 1.21684 1.22052 0.94656 0.92623 1.10366 1.22713 0.87765 0.96298 1.12451 1.42705 1.05559 1.05784 1.49927 1.17155 1.10240 0.81436 1.05871 1.20297 0.97086 0.96429 0.96098 1.20956 1.03047 0.90956 1.02909 1.17737 0.87933 0.93217 0.89776 1.19716 1.34303 0.96350 0.96929 0.89759 1.26045 0.94355 0.99606 0.94651 1.69821 1.33127 1.38141 0.99056 0.86206 0.79793 0.80631 0.79724 1.19269 1.19727 1.18113 1.20623 1.03095 0.94725 1.05406 1.20158 0.98885 0.93635 0.96151 0.90876 0.90168 0.90434 0.82085 0.81778 0.88684 0.85693 0.90250 0.87996 0.88740 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -1.00 9.25 36.00 0.33 -0.66 16 2 C 0.19 3.83 7.78 -154.59 -1.20 2.63 16 3 N -0.51 -10.12 11.24 -10.61 -0.12 -10.24 16 4 C -0.05 -0.87 11.85 -17.81 -0.21 -1.08 16 5 C -0.06 -1.07 11.28 -16.45 -0.19 -1.26 16 6 N -0.37 -7.51 2.86 -57.66 -0.17 -7.67 16 7 C -0.06 -1.22 5.69 -83.43 -0.47 -1.70 16 8 C -0.08 -1.77 8.67 -39.81 -0.35 -2.11 16 9 C -0.16 -3.80 8.64 -39.25 -0.34 -4.14 16 10 C 0.12 2.85 5.57 -106.81 -0.60 2.26 16 11 C -0.45 -10.75 9.04 -37.83 -0.34 -11.09 16 12 H 0.08 1.94 7.91 -52.48 -0.41 1.52 16 13 C 0.07 1.69 5.13 -17.33 -0.09 1.60 16 14 N -0.78 -18.45 10.97 55.55 0.61 -17.84 16 15 Si 0.91 16.97 29.60 -169.99 -5.03 11.93 16 16 H -0.27 -4.93 7.11 56.52 0.40 -4.53 16 17 H -0.27 -4.97 7.11 56.52 0.40 -4.57 16 18 H -0.26 -4.76 7.11 56.52 0.40 -4.36 16 19 C -0.22 -4.96 9.74 -39.25 -0.38 -5.34 16 20 C -0.07 -1.49 9.61 -39.81 -0.38 -1.87 16 21 H 0.07 1.08 8.14 -51.93 -0.42 0.66 16 22 H 0.08 1.13 8.14 -51.93 -0.42 0.71 16 23 H 0.08 1.27 7.53 -51.93 -0.39 0.88 16 24 H 0.16 2.35 8.06 -52.48 -0.42 1.92 16 25 H 0.16 2.66 8.06 -52.49 -0.42 2.23 16 26 H 0.10 1.98 7.68 -52.48 -0.40 1.58 16 27 H 0.13 3.06 6.18 -52.49 -0.32 2.74 16 28 H 0.29 6.13 8.30 -40.82 -0.34 5.80 16 29 H 0.10 2.15 8.06 -52.49 -0.42 1.72 16 30 H 0.09 1.86 8.06 -52.49 -0.42 1.44 16 LS Contribution 264.37 15.07 3.98 3.98 Total: -1.00 -26.74 264.37 -8.14 -34.88 By element: Atomic # 1 Polarization: 10.94 SS G_CDS: -3.20 Total: 7.73 kcal Atomic # 6 Polarization: -18.56 SS G_CDS: -4.22 Total: -22.78 kcal Atomic # 7 Polarization: -36.08 SS G_CDS: 0.33 Total: -35.76 kcal Atomic # 14 Polarization: 16.97 SS G_CDS: -5.03 Total: 11.93 kcal Total LS contribution 3.98 Total: 3.98 kcal Total: -26.74 -8.14 -34.88 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000214887370.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 105.227 kcal (2) G-P(sol) polarization free energy of solvation -26.737 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 78.490 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.143 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.880 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.347 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds