Wall clock time and date at job start Mon Mar 30 2020 03:24:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.53002 * 109.46837 * 2 1 4 4 F 1.39887 * 109.47283 * 239.99990 * 2 1 3 5 5 C 1.53004 * 109.46971 * 119.99491 * 2 1 3 6 6 N 1.46501 * 109.46845 * 60.00490 * 5 2 1 7 7 N 1.29015 * 126.43541 * 269.96873 * 6 5 2 8 8 N 1.28744 * 108.80363 * 180.02562 * 7 6 5 9 9 N 1.28839 * 109.39767 * 359.77005 * 8 7 6 10 10 C 1.31069 * 107.98928 * 0.37536 * 9 8 7 11 11 C 1.50700 * 126.65585 * 179.89960 * 10 9 8 12 12 C 1.50702 * 109.46869 * 269.68308 * 11 10 9 13 13 H 1.08002 * 120.00299 * 0.02562 * 12 11 10 14 14 C 1.37884 * 119.99942 * 179.72213 * 12 11 10 15 15 N 1.31514 * 119.99985 * 180.27663 * 14 12 11 16 16 Si 1.86800 * 119.99777 * 0.28166 * 14 12 11 17 17 H 1.48498 * 109.47109 * 89.99834 * 16 14 12 18 18 H 1.48507 * 109.46754 * 209.99574 * 16 14 12 19 19 H 1.48498 * 109.47278 * 329.99405 * 16 14 12 20 20 H 1.08995 * 109.47218 * 300.00031 * 1 2 3 21 21 H 1.08997 * 109.47125 * 60.00594 * 1 2 3 22 22 H 1.09000 * 109.46538 * 180.02562 * 1 2 3 23 23 H 1.08997 * 109.47138 * 180.02562 * 3 2 1 24 24 H 1.09000 * 109.47251 * 299.99781 * 3 2 1 25 25 H 1.09003 * 109.47511 * 59.99381 * 3 2 1 26 26 H 1.09000 * 109.47255 * 299.99927 * 5 2 1 27 27 H 1.08997 * 109.46797 * 180.02562 * 5 2 1 28 28 H 1.09004 * 109.47210 * 149.68602 * 11 10 9 29 29 H 1.08994 * 109.47551 * 29.68254 * 11 10 9 30 30 H 0.96996 * 119.99730 * 180.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 9 1.9964 -0.6594 -1.1422 5 6 2.0400 -0.7212 1.2493 6 7 1.5517 -2.1024 1.2493 7 7 0.4491 -2.5253 1.7687 8 7 0.3587 -3.7947 1.5741 9 7 1.3945 -4.2030 0.9257 10 6 2.1695 -3.1687 0.7081 11 6 3.4923 -3.1716 -0.0139 12 6 4.6040 -3.4084 0.9755 13 1 4.3756 -3.5437 2.0224 14 6 5.9125 -3.4586 0.5434 15 7 6.8822 -3.6707 1.4060 16 14 6.3076 -3.2253 -1.2674 17 1 6.5326 -1.7836 -1.5431 18 1 7.5327 -3.9918 -1.6094 19 1 5.1717 -3.7151 -2.0890 20 1 -0.3633 0.5138 0.8899 21 1 -0.3633 0.5137 -0.8900 22 1 -0.3632 -1.0277 0.0005 23 1 3.1300 1.4426 -0.0005 24 1 1.6767 1.9564 -0.8900 25 1 1.6766 1.9565 0.8899 26 1 1.6767 -0.2073 2.1393 27 1 3.1300 -0.7207 1.2495 28 1 3.6409 -2.2094 -0.5040 29 1 3.4964 -3.9646 -0.7616 30 1 7.8026 -3.7056 1.1021 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260010651.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:24:51 Heat of formation + Delta-G solvation = 53.969118 kcal Electronic energy + Delta-G solvation = -16415.262393 eV Core-core repulsion = 13583.606904 eV Total energy + Delta-G solvation = -2831.655490 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 228.108 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -47.77364 -43.43743 -36.34808 -33.94282 -33.34555 -32.02773 -29.00134 -27.75304 -27.39008 -23.72206 -22.72125 -21.32146 -20.25327 -17.36353 -17.27195 -16.50284 -15.90608 -15.17793 -14.90828 -14.65030 -13.81116 -13.60726 -13.06132 -12.70649 -12.64124 -12.44046 -12.24460 -12.13004 -11.97620 -11.57154 -11.43292 -11.03737 -10.94752 -10.72151 -10.41025 -10.28394 -10.13603 -9.71513 -8.99238 -8.78150 -6.27263 -4.31461 1.91337 2.49146 3.00763 3.17112 3.27052 3.30336 4.12629 4.24523 4.29991 4.42156 4.48544 4.87118 5.02335 5.06386 5.26569 5.30671 5.40327 5.46241 5.53692 5.79216 5.85603 5.95129 6.16271 6.37367 6.62289 6.79470 6.92207 7.35062 8.21469 8.72068 9.28571 9.31601 10.84626 Molecular weight = 228.11amu Principal moments of inertia in cm(-1) A = 0.024902 B = 0.010894 C = 0.008698 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1124.138971 B = 2569.576927 C = 3218.335978 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.101 3.899 3 C -0.170 4.170 4 F -0.197 7.197 5 C 0.096 3.904 6 N -0.317 5.317 7 N -0.124 5.124 8 N -0.088 5.088 9 N -0.322 5.322 10 C 0.256 3.744 11 C 0.056 3.944 12 C -0.528 4.528 13 H 0.075 0.925 14 C 0.080 3.920 15 N -0.888 5.888 16 Si 0.874 3.126 17 H -0.272 1.272 18 H -0.282 1.282 19 H -0.260 1.260 20 H 0.080 0.920 21 H 0.071 0.929 22 H 0.069 0.931 23 H 0.078 0.922 24 H 0.076 0.924 25 H 0.080 0.920 26 H 0.121 0.879 27 H 0.131 0.869 28 H 0.048 0.952 29 H 0.061 0.939 30 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.974 12.195 -3.693 15.031 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.231 4.231 2 C 0.081 3.919 3 C -0.228 4.228 4 F -0.178 7.178 5 C -0.027 4.027 6 N -0.117 5.117 7 N -0.110 5.110 8 N -0.082 5.082 9 N -0.171 5.171 10 C -0.021 4.021 11 C 0.016 3.984 12 C -0.567 4.567 13 H 0.093 0.907 14 C -0.124 4.124 15 N -0.524 5.524 16 Si 0.700 3.300 17 H -0.197 1.197 18 H -0.207 1.207 19 H -0.185 1.185 20 H 0.099 0.901 21 H 0.090 0.910 22 H 0.088 0.912 23 H 0.097 0.903 24 H 0.095 0.905 25 H 0.099 0.901 26 H 0.139 0.861 27 H 0.149 0.851 28 H 0.066 0.934 29 H 0.079 0.921 30 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -8.947 11.491 -3.176 14.906 hybrid contribution 1.162 0.587 -1.109 1.710 sum -7.785 12.078 -4.285 14.995 Atomic orbital electron populations 1.22399 0.92700 1.04276 1.03744 1.21313 0.95731 0.92695 0.82123 1.22320 1.03314 0.92949 1.04172 1.92923 1.90069 1.82651 1.52124 1.22806 1.03233 0.76754 0.99916 1.48141 1.14628 1.10579 1.38395 1.78635 1.04447 1.08927 1.18972 1.78426 1.16468 1.00944 1.12341 1.75027 1.01087 1.24295 1.16723 1.26693 0.98380 0.81490 0.95496 1.18555 0.84035 0.99899 0.95930 1.20668 0.88984 1.52124 0.94920 0.90727 1.24873 0.95823 0.93837 0.97828 1.69871 1.00147 1.47890 1.34534 0.86852 0.78828 0.78908 0.85416 1.19739 1.20718 1.18468 0.90102 0.91004 0.91200 0.90341 0.90508 0.90105 0.86102 0.85063 0.93450 0.92130 0.92113 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.96 8.65 37.16 0.32 -1.64 16 2 C 0.10 1.24 1.46 -90.61 -0.13 1.11 16 3 C -0.17 -1.45 8.93 37.16 0.33 -1.12 16 4 F -0.20 -3.14 15.23 2.25 0.03 -3.10 16 5 C 0.10 1.34 5.27 -4.04 -0.02 1.32 16 6 N -0.32 -5.99 2.82 -58.27 -0.16 -6.16 16 7 N -0.12 -2.45 12.15 60.35 0.73 -1.72 16 8 N -0.09 -1.96 13.43 60.35 0.81 -1.15 16 9 N -0.32 -7.67 12.36 32.70 0.40 -7.27 16 10 C 0.26 5.71 7.13 -155.44 -1.11 4.60 16 11 C 0.06 1.30 4.18 -29.03 -0.12 1.18 16 12 C -0.53 -14.18 9.65 -34.44 -0.33 -14.51 16 13 H 0.07 2.24 7.98 -52.49 -0.42 1.82 16 14 C 0.08 2.18 5.47 -17.82 -0.10 2.08 16 15 N -0.89 -25.69 13.96 55.43 0.77 -24.91 16 16 Si 0.87 19.93 27.47 -169.99 -4.67 15.26 16 17 H -0.27 -5.95 7.11 56.52 0.40 -5.55 16 18 H -0.28 -6.44 7.11 56.52 0.40 -6.03 16 19 H -0.26 -5.75 6.54 56.52 0.37 -5.38 16 20 H 0.08 0.74 8.14 -51.93 -0.42 0.31 16 21 H 0.07 0.70 8.14 -51.93 -0.42 0.28 16 22 H 0.07 1.00 6.80 -51.93 -0.35 0.65 16 23 H 0.08 0.68 8.14 -51.93 -0.42 0.26 16 24 H 0.08 0.59 8.14 -51.93 -0.42 0.17 16 25 H 0.08 0.50 8.14 -51.93 -0.42 0.08 16 26 H 0.12 1.29 8.14 -51.93 -0.42 0.87 16 27 H 0.13 1.90 7.75 -51.93 -0.40 1.50 16 28 H 0.05 1.01 5.89 -51.93 -0.31 0.71 16 29 H 0.06 1.43 7.19 -51.93 -0.37 1.06 16 30 H 0.27 7.24 8.31 -40.82 -0.34 6.90 16 LS Contribution 261.68 15.07 3.94 3.94 Total: -1.00 -31.60 261.68 -2.85 -34.45 By element: Atomic # 1 Polarization: 1.20 SS G_CDS: -3.56 Total: -2.36 kcal Atomic # 6 Polarization: -5.82 SS G_CDS: -1.16 Total: -6.98 kcal Atomic # 7 Polarization: -43.77 SS G_CDS: 2.56 Total: -41.21 kcal Atomic # 9 Polarization: -3.14 SS G_CDS: 0.03 Total: -3.10 kcal Atomic # 14 Polarization: 19.93 SS G_CDS: -4.67 Total: 15.26 kcal Total LS contribution 3.94 Total: 3.94 kcal Total: -31.60 -2.85 -34.45 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260010651.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.417 kcal (2) G-P(sol) polarization free energy of solvation -31.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 56.821 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.852 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.448 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.969 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds