Wall clock time and date at job start Mon Mar 30 2020 03:00:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.46499 * 119.99658 * 2 1 4 4 C 1.50701 * 109.46992 * 90.00121 * 3 2 1 5 5 H 1.07998 * 120.00129 * 0.02562 * 4 3 2 6 6 C 1.37880 * 119.99861 * 179.97438 * 4 3 2 7 7 N 1.31510 * 119.99913 * 0.02562 * 6 4 3 8 8 Si 1.86797 * 119.99734 * 180.02562 * 6 4 3 9 9 H 1.48506 * 109.47294 * 60.00559 * 8 6 4 10 10 H 1.48503 * 109.46954 * 180.02562 * 8 6 4 11 11 H 1.48503 * 109.47431 * 300.00157 * 8 6 4 12 12 C 1.34775 * 120.00005 * 180.02562 * 2 1 3 13 13 O 1.21285 * 119.99996 * 179.97438 * 12 2 1 14 14 C 1.50698 * 120.00318 * 0.02562 * 12 2 1 15 15 H 1.08998 * 110.36638 * 42.34580 * 14 12 2 16 16 C 1.54384 * 110.40863 * 280.00121 * 14 12 2 17 17 C 1.54264 * 105.05814 * 217.36876 * 16 14 12 18 18 H 1.08993 * 110.32393 * 118.89104 * 17 16 14 19 19 O 1.42901 * 110.32102 * 240.99931 * 17 16 14 20 20 C 1.54381 * 105.05998 * 359.97438 * 17 16 14 21 21 N 1.48553 * 110.41577 * 164.82609 * 14 12 2 22 22 H 1.08996 * 109.47461 * 90.00011 * 1 2 3 23 23 H 1.08998 * 109.46888 * 209.99779 * 1 2 3 24 24 H 1.08994 * 109.47490 * 329.99842 * 1 2 3 25 25 H 1.09002 * 109.47391 * 330.00112 * 3 2 1 26 26 H 1.09001 * 109.46813 * 210.00168 * 3 2 1 27 27 H 0.97002 * 119.99768 * 179.97438 * 7 6 4 28 28 H 1.08997 * 110.32378 * 336.25949 * 16 14 12 29 29 H 1.08997 * 110.32890 * 98.37295 * 16 14 12 30 30 H 0.96702 * 113.99816 * 179.97438 * 19 17 16 31 31 H 1.09003 * 110.40935 * 142.62910 * 20 17 16 32 32 H 1.08990 * 110.41603 * 265.07833 * 20 17 16 33 33 H 1.00908 * 111.00242 * 277.81768 * 21 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1974 1.2688 0.0000 4 6 2.4486 1.7038 1.4208 5 1 2.0981 1.0958 2.2417 6 6 3.1268 2.8775 1.6728 7 7 3.5540 3.6176 0.6732 8 14 3.4387 3.4163 3.4339 9 1 4.2413 2.3811 4.1336 10 1 4.1810 4.7025 3.4340 11 1 2.1414 3.5941 4.1344 12 6 2.1389 -1.1672 -0.0005 13 8 3.3517 -1.1672 -0.0010 14 6 1.3855 -2.4723 -0.0017 15 1 0.5420 -2.4228 -0.6903 16 6 0.8981 -2.8139 1.4228 17 6 1.0502 -4.3444 1.5422 18 1 1.7455 -4.5943 2.3435 19 8 -0.2208 -4.9522 1.7813 20 6 1.6160 -4.7988 0.1796 21 7 2.2902 -3.5926 -0.3665 22 1 -0.3634 0.0000 -1.0276 23 1 -0.3633 -0.8900 0.5138 24 1 -0.3634 0.8899 0.5138 25 1 1.6083 2.0284 -0.5138 26 1 3.1498 1.1384 -0.5139 27 1 4.0308 4.4436 0.8505 28 1 1.5188 -2.3127 2.1656 29 1 -0.1457 -2.5250 1.5454 30 1 -0.1868 -5.9150 1.8649 31 1 2.3351 -5.6064 0.3168 32 1 0.8088 -5.1154 -0.4807 33 1 2.3967 -3.6602 -1.3677 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000020434569.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:00:34 Heat of formation + Delta-G solvation = -73.320919 kcal Electronic energy + Delta-G solvation = -16318.764935 eV Core-core repulsion = 13572.757289 eV Total energy + Delta-G solvation = -2746.007646 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 228.126 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -39.72902 -37.91856 -35.41053 -34.67516 -32.57898 -29.97075 -28.80902 -27.41063 -25.72349 -23.45987 -21.62360 -20.90708 -18.43184 -17.91037 -16.47865 -16.46153 -16.20798 -15.13279 -14.54523 -14.40041 -13.96418 -13.37951 -13.36252 -13.10796 -12.65373 -12.28495 -12.09337 -11.83973 -11.66151 -11.40432 -11.13794 -10.93182 -10.78332 -10.52387 -10.15233 -10.10548 -9.60700 -9.00387 -8.40216 -8.39795 -7.58502 -6.01066 -4.05739 3.34162 3.37413 3.38630 3.43231 3.72953 4.05524 4.45760 4.54216 4.64288 4.68413 4.98061 5.15559 5.28280 5.34506 5.41492 5.55673 5.70393 5.73673 5.86567 5.94785 6.12273 6.25257 6.55443 7.09946 7.24224 7.46160 7.47923 7.59183 7.95679 8.27006 8.47144 8.94175 9.17705 9.59298 11.06993 Molecular weight = 228.13amu Principal moments of inertia in cm(-1) A = 0.036331 B = 0.006756 C = 0.006442 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 770.496217 B = 4143.593454 C = 4345.617952 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.081 3.919 2 N -0.604 5.604 3 C 0.246 3.754 4 C -0.526 4.526 5 H 0.057 0.943 6 C 0.061 3.939 7 N -0.896 5.896 8 Si 0.898 3.102 9 H -0.276 1.276 10 H -0.286 1.286 11 H -0.277 1.277 12 C 0.511 3.489 13 O -0.518 6.518 14 C 0.049 3.951 15 H 0.067 0.933 16 C -0.106 4.106 17 C 0.099 3.901 18 H 0.072 0.928 19 O -0.565 6.565 20 C 0.005 3.995 21 N -0.635 5.635 22 H 0.042 0.958 23 H 0.057 0.943 24 H 0.075 0.925 25 H 0.032 0.968 26 H 0.043 0.957 27 H 0.264 0.736 28 H 0.089 0.911 29 H 0.088 0.912 30 H 0.377 0.623 31 H 0.085 0.915 32 H 0.049 0.951 33 H 0.342 0.658 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.672 -14.983 -0.963 17.339 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 N -0.338 5.338 3 C 0.127 3.873 4 C -0.565 4.565 5 H 0.075 0.925 6 C -0.141 4.141 7 N -0.535 5.535 8 Si 0.726 3.274 9 H -0.202 1.202 10 H -0.212 1.212 11 H -0.203 1.203 12 C 0.296 3.704 13 O -0.393 6.393 14 C -0.064 4.064 15 H 0.085 0.915 16 C -0.144 4.144 17 C 0.040 3.960 18 H 0.090 0.910 19 O -0.370 6.370 20 C -0.125 4.125 21 N -0.265 5.265 22 H 0.061 0.939 23 H 0.076 0.924 24 H 0.093 0.907 25 H 0.050 0.950 26 H 0.061 0.939 27 H 0.073 0.927 28 H 0.107 0.893 29 H 0.107 0.893 30 H 0.224 0.776 31 H 0.103 0.897 32 H 0.067 0.933 33 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -7.589 -14.058 -0.509 15.984 hybrid contribution -0.474 -0.296 0.304 0.636 sum -8.064 -14.354 -0.205 16.465 Atomic orbital electron populations 1.21692 0.81687 1.02679 1.00309 1.48153 1.06037 1.07697 1.71885 1.19275 0.92529 0.78012 0.97475 1.21406 1.36518 1.06245 0.92317 0.92516 1.24936 0.95360 0.96401 0.97419 1.69923 1.38393 1.14367 1.30781 0.86561 0.78348 0.77814 0.84711 1.20162 1.21172 1.20268 1.19945 0.88075 0.84248 0.78156 1.90677 1.13509 1.86723 1.48413 1.22496 0.94066 0.92236 0.97600 0.91513 1.22238 1.02722 0.93552 0.95859 1.22548 0.84401 0.93451 0.95616 0.91035 1.86561 1.30561 1.24939 1.94929 1.23667 0.97752 0.94521 0.96536 1.63346 1.43928 1.00668 1.18573 0.93934 0.92440 0.90670 0.95012 0.93866 0.92683 0.89256 0.89325 0.77630 0.89672 0.93253 0.84149 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.32 9.95 59.85 0.60 1.92 16 2 N -0.60 -13.17 2.86 -182.96 -0.52 -13.69 16 3 C 0.25 6.59 5.16 -5.19 -0.03 6.56 16 4 C -0.53 -15.20 9.39 -34.44 -0.32 -15.52 16 5 H 0.06 1.63 7.81 -52.49 -0.41 1.22 16 6 C 0.06 1.77 5.46 -17.82 -0.10 1.67 16 7 N -0.90 -27.00 13.29 55.43 0.74 -26.27 16 8 Si 0.90 22.18 29.54 -169.99 -5.02 17.16 16 9 H -0.28 -6.86 7.11 56.52 0.40 -6.46 16 10 H -0.29 -6.93 7.11 56.52 0.40 -6.53 16 11 H -0.28 -6.62 7.11 56.52 0.40 -6.22 16 12 C 0.51 11.04 6.86 -10.99 -0.08 10.97 16 13 O -0.52 -13.67 16.14 5.55 0.09 -13.58 16 14 C 0.05 0.79 2.60 -67.22 -0.18 0.61 16 15 H 0.07 0.93 7.39 -51.93 -0.38 0.54 16 16 C -0.11 -1.55 5.74 -25.34 -0.15 -1.69 16 17 C 0.10 1.18 4.42 -25.35 -0.11 1.07 16 18 H 0.07 0.82 8.14 -51.93 -0.42 0.40 16 19 O -0.56 -5.95 13.27 -35.23 -0.47 -6.42 16 20 C 0.01 0.06 7.21 -2.17 -0.02 0.04 16 21 N -0.63 -9.41 6.86 -103.94 -0.71 -10.13 16 22 H 0.04 0.60 8.14 -51.93 -0.42 0.18 16 23 H 0.06 0.80 5.11 -51.93 -0.27 0.53 16 24 H 0.07 1.26 8.07 -51.93 -0.42 0.84 16 25 H 0.03 0.85 8.07 -51.93 -0.42 0.43 16 26 H 0.04 1.30 7.42 -51.93 -0.39 0.92 16 27 H 0.26 7.51 8.31 -40.82 -0.34 7.17 16 28 H 0.09 1.50 7.85 -51.93 -0.41 1.09 16 29 H 0.09 1.20 6.85 -51.93 -0.36 0.85 16 30 H 0.38 2.16 9.12 45.56 0.42 2.58 16 31 H 0.08 0.82 8.14 -51.93 -0.42 0.40 16 32 H 0.05 0.48 8.08 -51.93 -0.42 0.06 16 33 H 0.34 4.54 8.92 -39.29 -0.35 4.19 16 LS Contribution 277.50 15.07 4.18 4.18 Total: -1.00 -35.03 277.50 -5.90 -40.93 By element: Atomic # 1 Polarization: 5.99 SS G_CDS: -3.80 Total: 2.18 kcal Atomic # 6 Polarization: 6.01 SS G_CDS: -0.38 Total: 5.63 kcal Atomic # 7 Polarization: -49.58 SS G_CDS: -0.50 Total: -50.08 kcal Atomic # 8 Polarization: -19.63 SS G_CDS: -0.38 Total: -20.00 kcal Atomic # 14 Polarization: 22.18 SS G_CDS: -5.02 Total: 17.16 kcal Total LS contribution 4.18 Total: 4.18 kcal Total: -35.03 -5.90 -40.93 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000020434569.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.393 kcal (2) G-P(sol) polarization free energy of solvation -35.033 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.426 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.895 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.928 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.321 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds