Wall clock time and date at job start Mon Mar 30 2020 03:00:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46902 * 1 3 3 C 1.46905 * 111.00045 * 2 1 4 4 C 1.50700 * 109.47134 * 66.04543 * 3 2 1 5 5 H 1.08002 * 119.99997 * 359.97438 * 4 3 2 6 6 C 1.37872 * 119.99697 * 180.02562 * 4 3 2 7 7 N 1.31510 * 120.00505 * 0.02562 * 6 4 3 8 8 Si 1.86804 * 119.99994 * 179.97438 * 6 4 3 9 9 H 1.48506 * 109.46755 * 0.02562 * 8 6 4 10 10 H 1.48495 * 109.47184 * 119.99704 * 8 6 4 11 11 H 1.48496 * 109.47189 * 240.00350 * 8 6 4 12 12 C 1.46896 * 111.00407 * 236.04327 * 2 1 3 13 13 C 1.52996 * 113.01045 * 75.58869 * 12 2 1 14 14 C 1.50696 * 109.47160 * 174.75652 * 13 12 2 15 15 O 1.20825 * 120.00428 * 7.81645 * 14 13 12 16 16 O 1.34234 * 119.99646 * 187.81756 * 14 13 12 17 17 C 1.53938 * 113.73165 * 303.95795 * 12 2 1 18 18 N 1.47965 * 86.17991 * 269.35784 * 17 12 2 19 19 C 1.47958 * 90.76126 * 335.31192 * 18 17 12 20 20 H 1.08995 * 109.46942 * 183.95706 * 1 2 3 21 21 H 1.09002 * 109.46730 * 303.95388 * 1 2 3 22 22 H 1.08998 * 109.46778 * 63.95203 * 1 2 3 23 23 H 1.08999 * 109.47108 * 186.04359 * 3 2 1 24 24 H 1.08991 * 109.46894 * 306.04211 * 3 2 1 25 25 H 0.97003 * 120.00641 * 180.02562 * 7 6 4 26 26 H 1.09007 * 109.47439 * 294.75654 * 13 12 2 27 27 H 1.09003 * 109.47054 * 54.75825 * 13 12 2 28 28 H 0.96703 * 116.99733 * 180.02562 * 16 14 13 29 29 H 1.09001 * 113.75991 * 23.67194 * 17 12 2 30 30 H 1.09002 * 113.76077 * 155.03856 * 17 12 2 31 31 H 1.00899 * 110.99617 * 88.20424 * 18 17 12 32 32 H 1.09004 * 113.75602 * 270.36997 * 19 18 17 33 33 H 1.08996 * 113.75857 * 139.01077 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3715 0.0000 4 6 1.6370 2.0472 1.2984 5 1 1.0739 1.5115 2.0485 6 6 2.0268 3.3495 1.5284 7 7 2.7111 4.0022 0.6145 8 14 1.5818 4.1874 3.1376 9 1 0.8147 3.2446 3.9909 10 1 2.8232 4.5949 3.8433 11 1 0.7542 5.3883 2.8581 12 6 1.9955 -0.7660 -1.1375 13 6 1.8827 -0.0167 -2.4666 14 6 2.5583 -0.8145 -3.5520 15 8 2.9520 -1.9337 -3.3231 16 8 2.7229 -0.2817 -4.7730 17 6 1.4827 -2.2162 -1.1984 18 7 2.6676 -2.5647 -0.3835 19 6 3.3873 -1.3731 -0.8846 20 1 -0.3633 -1.0252 0.0709 21 1 -0.3633 0.5740 0.8525 22 1 -0.3633 0.4513 -0.9233 23 1 3.0798 1.3444 -0.1082 24 1 1.5612 1.9273 -0.8309 25 1 2.9857 4.9184 0.7764 26 1 0.8310 0.1210 -2.7181 27 1 2.3653 0.9565 -2.3772 28 1 3.1614 -0.8318 -5.4365 29 1 0.5347 -2.3688 -0.6825 30 1 1.4970 -2.6454 -2.2002 31 1 2.4671 -2.4783 0.6016 32 1 3.9587 -1.5557 -1.7947 33 1 3.9611 -0.8521 -0.1182 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000225720650.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:00:25 Heat of formation + Delta-G solvation = -35.785598 kcal Electronic energy + Delta-G solvation = -16761.276907 eV Core-core repulsion = 14016.896915 eV Total energy + Delta-G solvation = -2744.379992 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 228.126 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -40.96964 -38.93696 -35.99553 -35.01015 -32.46501 -30.50675 -27.65576 -25.95701 -24.97643 -23.90466 -21.67019 -21.40320 -18.19424 -18.01633 -16.66637 -16.12609 -15.94973 -15.68297 -14.81487 -14.39205 -13.92280 -13.59309 -13.04940 -13.00852 -12.65486 -12.59624 -12.14149 -11.76220 -11.30247 -11.18352 -10.87859 -10.81983 -10.73765 -10.51372 -10.23681 -9.97536 -9.68763 -9.32260 -8.53589 -8.01124 -7.45040 -6.12171 -4.14031 2.32553 3.18999 3.25698 3.33709 3.37936 4.31809 4.50218 4.67933 4.81737 5.12878 5.24346 5.47509 5.63089 5.70565 5.90608 5.93445 6.07418 6.20079 6.25852 6.30356 6.43909 6.54678 6.63267 6.78416 7.12519 7.15548 7.67708 7.86579 7.93397 8.01754 8.03459 8.39373 8.93101 9.50864 10.98597 Molecular weight = 228.13amu Principal moments of inertia in cm(-1) A = 0.035258 B = 0.007675 C = 0.006953 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 793.948496 B = 3647.292903 C = 4026.332315 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 N -0.512 5.512 3 C 0.191 3.809 4 C -0.510 4.510 5 H 0.064 0.936 6 C 0.057 3.943 7 N -0.896 5.896 8 Si 0.898 3.102 9 H -0.272 1.272 10 H -0.283 1.283 11 H -0.285 1.285 12 C 0.050 3.950 13 C -0.141 4.141 14 C 0.480 3.520 15 O -0.500 6.500 16 O -0.520 6.520 17 C 0.024 3.976 18 N -0.645 5.645 19 C 0.029 3.971 20 H 0.050 0.950 21 H 0.080 0.920 22 H 0.015 0.985 23 H 0.032 0.968 24 H -0.003 1.003 25 H 0.262 0.738 26 H 0.102 0.898 27 H 0.114 0.886 28 H 0.404 0.596 29 H 0.065 0.935 30 H 0.105 0.895 31 H 0.337 0.663 32 H 0.107 0.893 33 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.208 -7.639 -7.297 10.792 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 N -0.235 5.235 3 C 0.066 3.934 4 C -0.549 4.549 5 H 0.082 0.918 6 C -0.145 4.145 7 N -0.536 5.536 8 Si 0.726 3.274 9 H -0.197 1.197 10 H -0.210 1.210 11 H -0.211 1.211 12 C -0.042 4.042 13 C -0.181 4.181 14 C 0.323 3.677 15 O -0.389 6.389 16 O -0.331 6.331 17 C -0.106 4.106 18 N -0.271 5.271 19 C -0.101 4.101 20 H 0.068 0.932 21 H 0.098 0.902 22 H 0.034 0.966 23 H 0.050 0.950 24 H 0.015 0.985 25 H 0.071 0.929 26 H 0.120 0.880 27 H 0.132 0.868 28 H 0.262 0.738 29 H 0.084 0.916 30 H 0.123 0.877 31 H 0.152 0.848 32 H 0.125 0.875 33 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -1.694 -8.450 -6.842 11.004 hybrid contribution -0.642 1.713 0.007 1.829 sum -2.336 -6.737 -6.835 9.878 Atomic orbital electron populations 1.22292 0.88445 0.99999 1.00990 1.62391 1.07276 1.18411 1.35464 1.19786 0.95604 0.81024 0.96998 1.21153 1.35130 0.96965 1.01654 0.91758 1.24978 0.95161 0.97322 0.97039 1.69951 1.38163 1.11475 1.33985 0.86431 0.78208 0.79306 0.83422 1.19654 1.20959 1.21078 1.24065 0.98327 0.94003 0.87806 1.22008 1.01992 1.01629 0.92494 1.23588 0.76185 0.85680 0.82233 1.90689 1.46943 1.20301 1.80950 1.84602 1.74496 1.51290 1.22759 1.24028 0.94348 0.91821 1.00449 1.65044 1.12250 1.40953 1.08837 1.23977 0.94759 0.89885 1.01500 0.93157 0.90168 0.96648 0.95033 0.98549 0.92861 0.88004 0.86761 0.73766 0.91618 0.87700 0.84834 0.87486 0.91049 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.56 9.05 60.07 0.54 1.10 16 2 N -0.51 -10.28 4.68 -229.96 -1.08 -11.35 16 3 C 0.19 4.63 3.67 -4.97 -0.02 4.61 16 4 C -0.51 -13.71 8.46 -34.44 -0.29 -14.00 16 5 H 0.06 1.72 7.12 -52.49 -0.37 1.35 16 6 C 0.06 1.55 5.46 -17.82 -0.10 1.46 16 7 N -0.90 -25.71 13.29 55.43 0.74 -24.98 16 8 Si 0.90 21.09 29.54 -169.99 -5.02 16.07 16 9 H -0.27 -6.28 7.11 56.52 0.40 -5.88 16 10 H -0.28 -6.65 7.11 56.52 0.40 -6.24 16 11 H -0.28 -6.62 7.11 56.52 0.40 -6.22 16 12 C 0.05 0.88 0.51 -133.29 -0.07 0.81 16 13 C -0.14 -2.25 4.86 -27.89 -0.14 -2.39 16 14 C 0.48 6.96 7.57 36.00 0.27 7.23 16 15 O -0.50 -8.06 11.74 -18.75 -0.22 -8.28 16 16 O -0.52 -6.17 13.42 -39.27 -0.53 -6.70 16 17 C 0.02 0.38 7.44 -2.76 -0.02 0.36 16 18 N -0.64 -11.09 8.56 -116.84 -1.00 -12.09 16 19 C 0.03 0.52 7.58 -2.77 -0.02 0.50 16 20 H 0.05 0.78 6.18 -51.93 -0.32 0.46 16 21 H 0.08 1.56 6.76 -51.93 -0.35 1.21 16 22 H 0.01 0.26 7.29 -51.93 -0.38 -0.12 16 23 H 0.03 0.83 7.82 -51.93 -0.41 0.43 16 24 H 0.00 -0.08 7.02 -51.93 -0.36 -0.45 16 25 H 0.26 7.12 8.31 -40.82 -0.34 6.78 16 26 H 0.10 1.51 7.43 -51.93 -0.39 1.12 16 27 H 0.11 2.03 6.59 -51.93 -0.34 1.69 16 28 H 0.40 2.87 9.10 45.56 0.41 3.28 16 29 H 0.07 0.99 6.14 -51.93 -0.32 0.68 16 30 H 0.11 1.70 5.75 -51.93 -0.30 1.40 16 31 H 0.34 5.75 8.89 -39.29 -0.35 5.40 16 32 H 0.11 1.92 5.28 -51.93 -0.27 1.65 16 33 H 0.07 1.37 8.02 -51.93 -0.42 0.95 16 LS Contribution 264.84 15.07 3.99 3.99 Total: -1.00 -29.92 264.84 -6.25 -36.17 By element: Atomic # 1 Polarization: 10.79 SS G_CDS: -3.30 Total: 7.49 kcal Atomic # 6 Polarization: -0.48 SS G_CDS: 0.16 Total: -0.32 kcal Atomic # 7 Polarization: -47.08 SS G_CDS: -1.34 Total: -48.42 kcal Atomic # 8 Polarization: -14.23 SS G_CDS: -0.75 Total: -14.98 kcal Atomic # 14 Polarization: 21.09 SS G_CDS: -5.02 Total: 16.07 kcal Total LS contribution 3.99 Total: 3.99 kcal Total: -29.92 -6.25 -36.17 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000225720650.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.382 kcal (2) G-P(sol) polarization free energy of solvation -29.915 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.533 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.252 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.168 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.786 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds