Wall clock time and date at job start Mon Mar 30 2020 03:27:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52995 * 109.47395 * 2 1 4 4 H 1.08997 * 109.47136 * 55.00041 * 3 2 1 5 5 O 1.42901 * 109.47323 * 294.99933 * 3 2 1 6 6 C 1.42891 * 114.00029 * 151.91255 * 5 3 2 7 7 C 1.52998 * 109.47104 * 174.99814 * 3 2 1 8 8 H 1.08998 * 110.27842 * 187.31404 * 7 3 2 9 9 C 1.54948 * 110.30877 * 65.22201 * 7 3 2 10 10 C 1.55303 * 100.94113 * 204.63785 * 9 7 3 11 11 C 1.54382 * 102.25407 * 34.13808 * 10 9 7 12 12 C 1.52992 * 109.83432 * 98.24647 * 11 10 9 13 13 C 1.50704 * 109.82859 * 219.12675 * 11 10 9 14 14 H 1.08002 * 119.99731 * 0.02562 * 13 11 10 15 15 C 1.37876 * 119.99948 * 179.97438 * 13 11 10 16 16 N 1.31515 * 120.00149 * 179.97438 * 15 13 11 17 17 Si 1.86800 * 119.99945 * 0.02562 * 15 13 11 18 18 H 1.48507 * 109.47343 * 89.99432 * 17 15 13 19 19 H 1.48498 * 109.47003 * 209.99268 * 17 15 13 20 20 H 1.48502 * 109.47212 * 329.99414 * 17 15 13 21 21 O 1.43235 * 107.58730 * 338.63695 * 11 10 9 22 22 H 1.09004 * 109.47018 * 59.99652 * 1 2 3 23 23 H 1.08998 * 109.47501 * 179.97438 * 1 2 3 24 24 H 1.08999 * 109.46813 * 299.99927 * 1 2 3 25 25 H 1.08997 * 109.46838 * 239.99534 * 2 1 3 26 26 H 1.09004 * 109.47018 * 120.00348 * 2 1 3 27 27 H 1.09003 * 109.47170 * 184.80996 * 6 5 3 28 28 H 1.08998 * 109.47435 * 304.81371 * 6 5 3 29 29 H 1.09008 * 109.47343 * 64.81302 * 6 5 3 30 30 H 1.08997 * 111.12757 * 322.55753 * 9 7 3 31 31 H 1.09000 * 111.12111 * 86.72036 * 9 7 3 32 32 H 1.09007 * 110.84460 * 152.32689 * 10 9 7 33 33 H 1.09000 * 110.85165 * 275.73727 * 10 9 7 34 34 H 1.08998 * 109.47350 * 59.99423 * 12 11 10 35 35 H 1.09001 * 109.47082 * 180.02562 * 12 11 10 36 36 H 1.09003 * 109.47092 * 299.99869 * 12 11 10 37 37 H 0.96993 * 119.99754 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 1 1.6055 1.9815 0.8418 5 8 1.6621 2.0814 -1.2210 6 6 1.4982 3.4965 -1.1100 7 6 3.5649 1.4442 0.1258 8 1 3.9319 2.4621 0.2570 9 6 4.2085 0.7977 -1.1267 10 6 5.5681 0.3213 -0.5467 11 6 5.1898 -0.0667 0.8989 12 6 4.9766 -1.5788 0.9917 13 6 6.2854 0.3539 1.8444 14 1 7.1666 0.8489 1.4638 15 6 6.1623 0.1077 3.1954 16 7 7.1186 0.4743 4.0205 17 14 4.6378 -0.7478 3.8537 18 1 4.8575 -2.2166 3.8586 19 1 4.3683 -0.2831 5.2381 20 1 3.4756 -0.4241 2.9878 21 8 3.9754 0.6182 1.2271 22 1 -0.3633 0.5139 -0.8900 23 1 -0.3634 -1.0276 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 1.8933 -0.5139 -0.8899 26 1 1.8933 -0.5139 0.8900 27 1 1.1292 3.8948 -2.0551 28 1 0.7827 3.7184 -0.3181 29 1 2.4576 3.9559 -0.8720 30 1 3.6160 -0.0453 -1.4821 31 1 4.3550 1.5337 -1.9173 32 1 5.9422 -0.5434 -1.0951 33 1 6.2988 1.1301 -0.5561 34 1 5.8951 -2.0933 0.7095 35 1 4.7095 -1.8460 2.0142 36 1 4.1728 -1.8745 0.3175 37 1 7.0321 0.3007 4.9709 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000386444469.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:27:56 Heat of formation + Delta-G solvation = -93.703736 kcal Electronic energy + Delta-G solvation = -17447.473420 eV Core-core repulsion = 14804.122252 eV Total energy + Delta-G solvation = -2643.351168 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 228.151 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -39.33965 -37.44863 -33.52998 -32.53064 -31.26862 -30.49891 -27.47684 -26.10027 -25.10236 -23.26234 -22.02007 -19.83960 -19.38854 -16.55111 -16.23822 -15.91272 -15.60070 -14.92576 -14.33399 -13.78032 -13.57003 -13.44459 -12.64737 -12.58872 -12.46363 -12.23991 -12.00514 -11.73681 -11.28780 -11.16425 -11.01035 -10.80117 -10.61610 -10.48621 -10.34573 -9.97863 -9.82757 -9.47767 -9.28780 -8.92208 -8.51974 -8.09031 -6.07209 -4.14478 3.37768 3.46919 3.68644 3.91254 4.54345 4.81446 5.05997 5.27270 5.34119 5.41094 5.42229 5.49635 5.53641 5.61179 5.70869 5.79489 5.93585 5.98636 6.08575 6.15997 6.27212 6.32225 6.38046 6.40567 6.50521 6.58098 6.65113 6.70143 6.79451 6.89378 7.30558 7.43868 7.73136 8.30629 8.52185 8.93854 9.58634 11.03902 Molecular weight = 228.15amu Principal moments of inertia in cm(-1) A = 0.030264 B = 0.009912 C = 0.009103 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 924.957966 B = 2824.270561 C = 3075.334922 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.118 4.118 3 C 0.092 3.908 4 H 0.060 0.940 5 O -0.379 6.379 6 C 0.030 3.970 7 C 0.057 3.943 8 H 0.056 0.944 9 C -0.141 4.141 10 C -0.130 4.130 11 C 0.194 3.806 12 C -0.146 4.146 13 C -0.523 4.523 14 H 0.075 0.925 15 C 0.083 3.917 16 N -0.896 5.896 17 Si 0.883 3.117 18 H -0.289 1.289 19 H -0.304 1.304 20 H -0.224 1.224 21 O -0.366 6.366 22 H 0.056 0.944 23 H 0.050 0.950 24 H 0.048 0.952 25 H 0.068 0.932 26 H 0.088 0.912 27 H 0.080 0.920 28 H 0.038 0.962 29 H 0.041 0.959 30 H 0.070 0.930 31 H 0.065 0.935 32 H 0.062 0.938 33 H 0.069 0.931 34 H 0.059 0.941 35 H 0.045 0.955 36 H 0.034 0.966 37 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.269 1.129 -9.268 14.634 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.155 4.155 3 C 0.034 3.966 4 H 0.078 0.922 5 O -0.298 6.298 6 C -0.066 4.066 7 C -0.002 4.002 8 H 0.074 0.926 9 C -0.178 4.178 10 C -0.168 4.168 11 C 0.156 3.844 12 C -0.203 4.203 13 C -0.560 4.560 14 H 0.093 0.907 15 C -0.121 4.121 16 N -0.533 5.533 17 Si 0.713 3.287 18 H -0.217 1.217 19 H -0.232 1.232 20 H -0.148 1.148 21 O -0.287 6.287 22 H 0.075 0.925 23 H 0.069 0.931 24 H 0.067 0.933 25 H 0.086 0.914 26 H 0.106 0.894 27 H 0.099 0.901 28 H 0.057 0.943 29 H 0.060 0.940 30 H 0.088 0.912 31 H 0.084 0.916 32 H 0.081 0.919 33 H 0.088 0.912 34 H 0.078 0.922 35 H 0.063 0.937 36 H 0.053 0.947 37 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -11.339 1.015 -9.079 14.561 hybrid contribution -0.385 -0.113 0.615 0.734 sum -11.724 0.902 -8.464 14.488 Atomic orbital electron populations 1.21735 0.96184 1.01088 1.01501 1.21598 0.95289 0.95034 1.03557 1.22225 0.94081 0.94258 0.86015 0.92230 1.87873 1.89308 1.19453 1.33198 1.22749 0.99994 0.82237 1.01659 1.23118 0.93101 0.95726 0.88229 0.92634 1.23122 0.97032 1.00266 0.97430 1.23036 0.96336 1.00812 0.96610 1.20048 0.83210 0.88733 0.92392 1.22286 1.00011 0.97939 1.00080 1.21181 1.02872 1.40408 0.91568 0.90695 1.25038 0.95899 0.94278 0.96882 1.69931 1.33220 1.46528 1.03644 0.86982 0.86157 0.78177 0.77345 1.21650 1.23233 1.14801 1.88740 1.43519 1.60322 1.36145 0.92537 0.93096 0.93314 0.91379 0.89392 0.90138 0.94323 0.94041 0.91181 0.91619 0.91886 0.91247 0.92183 0.93654 0.94703 0.92676 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.93 9.81 37.16 0.36 -1.57 16 2 C -0.12 -1.85 5.21 -26.73 -0.14 -1.99 16 3 C 0.09 1.51 2.24 -26.73 -0.06 1.45 16 4 H 0.06 0.97 7.74 -51.93 -0.40 0.57 16 5 O -0.38 -5.69 9.42 -35.23 -0.33 -6.02 16 6 C 0.03 0.36 10.86 101.05 1.10 1.46 16 7 C 0.06 1.09 3.49 -25.70 -0.09 1.00 16 8 H 0.06 1.10 8.08 -51.93 -0.42 0.68 16 9 C -0.14 -2.48 6.04 -24.48 -0.15 -2.63 16 10 C -0.13 -2.61 6.07 -24.79 -0.15 -2.76 16 11 C 0.19 4.55 0.78 -91.05 -0.07 4.48 16 12 C -0.15 -3.19 8.22 37.15 0.31 -2.89 16 13 C -0.52 -14.83 8.83 -34.44 -0.30 -15.14 16 14 H 0.08 2.29 7.77 -52.49 -0.41 1.88 16 15 C 0.08 2.42 5.45 -17.82 -0.10 2.33 16 16 N -0.90 -27.78 13.96 55.43 0.77 -27.00 16 17 Si 0.88 22.60 23.91 -169.99 -4.06 18.54 16 18 H -0.29 -7.21 6.87 56.52 0.39 -6.83 16 19 H -0.30 -7.90 7.11 56.52 0.40 -7.50 16 20 H -0.22 -5.51 5.38 56.52 0.30 -5.21 16 21 O -0.37 -8.47 6.32 -35.23 -0.22 -8.70 16 22 H 0.06 0.71 7.82 -51.93 -0.41 0.31 16 23 H 0.05 0.60 8.14 -51.93 -0.42 0.18 16 24 H 0.05 0.61 8.14 -51.93 -0.42 0.19 16 25 H 0.07 1.05 6.55 -51.93 -0.34 0.71 16 26 H 0.09 1.55 7.33 -51.93 -0.38 1.17 16 27 H 0.08 0.78 8.14 -51.93 -0.42 0.36 16 28 H 0.04 0.42 7.97 -51.93 -0.41 0.01 16 29 H 0.04 0.50 8.08 -51.92 -0.42 0.08 16 30 H 0.07 1.18 6.27 -51.93 -0.33 0.85 16 31 H 0.07 1.06 8.14 -51.93 -0.42 0.63 16 32 H 0.06 1.15 7.82 -51.92 -0.41 0.74 16 33 H 0.07 1.44 7.66 -51.93 -0.40 1.04 16 34 H 0.06 1.25 8.14 -51.93 -0.42 0.82 16 35 H 0.04 1.05 3.18 -51.93 -0.17 0.88 16 36 H 0.03 0.66 8.14 -51.93 -0.42 0.24 16 37 H 0.26 7.71 8.31 -40.82 -0.34 7.37 16 LS Contribution 283.41 15.07 4.27 4.27 Total: -1.00 -30.84 283.41 -5.13 -35.97 By element: Atomic # 1 Polarization: 5.45 SS G_CDS: -6.27 Total: -0.81 kcal Atomic # 6 Polarization: -16.95 SS G_CDS: 0.71 Total: -16.24 kcal Atomic # 7 Polarization: -27.78 SS G_CDS: 0.77 Total: -27.00 kcal Atomic # 8 Polarization: -14.17 SS G_CDS: -0.55 Total: -14.72 kcal Atomic # 14 Polarization: 22.60 SS G_CDS: -4.06 Total: 18.54 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -30.84 -5.13 -35.97 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000386444469.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.731 kcal (2) G-P(sol) polarization free energy of solvation -30.839 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.570 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.134 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.973 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.704 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds