Wall clock time and date at job start Mon Mar 30 2020 03:16:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.36867 * 119.99867 * 2 1 4 4 H 1.08003 * 120.00138 * 173.39305 * 3 2 1 5 5 C 1.39010 * 120.00076 * 353.39491 * 3 2 1 6 6 N 1.31394 * 120.00217 * 5.12540 * 5 3 2 7 7 Si 1.86804 * 119.99862 * 185.12672 * 5 3 2 8 8 H 1.48493 * 109.47284 * 359.97438 * 7 5 3 9 9 H 1.48506 * 109.47178 * 120.00180 * 7 5 3 10 10 H 1.48503 * 109.47052 * 239.99527 * 7 5 3 11 11 C 1.34774 * 120.00069 * 179.97438 * 2 1 3 12 12 O 1.21759 * 119.99871 * 5.74057 * 11 2 1 13 13 C 1.46364 * 119.99802 * 185.74090 * 11 2 1 14 14 O 1.35005 * 126.10423 * 354.15512 * 13 11 2 15 15 C 1.33941 * 109.45651 * 179.73471 * 14 13 11 16 16 C 1.35079 * 109.05092 * 359.97438 * 15 14 13 17 17 C 1.37836 * 126.10049 * 173.83946 * 13 11 2 18 18 Cl 1.73595 * 126.74543 * 0.24422 * 17 13 11 19 19 H 1.08994 * 109.47105 * 184.62937 * 1 2 3 20 20 H 1.09003 * 109.47031 * 304.62653 * 1 2 3 21 21 H 1.08998 * 109.47040 * 64.62435 * 1 2 3 22 22 H 0.97000 * 120.00280 * 180.02562 * 6 5 3 23 23 H 1.08002 * 125.47266 * 180.02562 * 15 14 13 24 24 H 1.07999 * 126.40448 * 180.02562 * 16 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1493 1.1853 0.0000 4 1 3.2240 1.1885 0.1076 5 6 1.4612 2.3852 -0.1385 6 7 0.1476 2.3896 -0.1681 7 14 2.4040 3.9914 -0.2824 8 1 3.8620 3.7167 -0.2212 9 1 2.0765 4.6434 -1.5759 10 1 2.0229 4.8910 0.8359 11 6 2.1389 -1.1672 0.0005 12 8 1.5347 -2.2190 -0.1045 13 6 3.5970 -1.1702 0.1273 14 8 4.3968 -0.0826 0.1395 15 6 5.6722 -0.4682 0.2764 16 6 5.7193 -1.8158 0.3560 17 6 4.3982 -2.2837 0.2617 18 17 3.8769 -3.9390 0.3068 19 1 -0.3633 -1.0243 0.0829 20 1 -0.3633 0.5840 0.8457 21 1 -0.3633 0.4404 -0.9285 22 1 -0.3326 3.2268 -0.2651 23 1 6.5257 0.1924 0.3176 24 1 6.6068 -2.4205 0.4705 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260165742.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:16:04 Heat of formation + Delta-G solvation = -1.130494 kcal Electronic energy + Delta-G solvation = -13938.781656 eV Core-core repulsion = 11267.228736 eV Total energy + Delta-G solvation = -2671.552921 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 229.029 amu Computer time = 0.17 seconds Orbital eigenvalues (eV) -42.03128 -38.22678 -36.00133 -34.95946 -32.29522 -31.56506 -29.38142 -26.52243 -24.79235 -21.80562 -21.19384 -19.48715 -18.49067 -16.04257 -16.00958 -15.71209 -14.50364 -14.34163 -13.80955 -13.45119 -13.13254 -12.64227 -12.57621 -11.81536 -11.71034 -11.56629 -11.10340 -10.80596 -10.49833 -10.27961 -10.19485 -9.27297 -9.15619 -8.73028 -8.17317 -7.90355 -6.49727 -4.00510 1.69819 2.67501 2.71784 3.03610 3.10155 3.15145 3.54489 3.92656 4.14511 4.62258 4.99563 5.23673 5.52871 5.79543 6.10699 6.25381 6.58564 6.81547 7.12841 7.24656 7.37271 7.50232 7.59932 8.28508 8.85757 9.29899 9.70507 10.41678 Molecular weight = 229.03amu Principal moments of inertia in cm(-1) A = 0.034897 B = 0.010246 C = 0.007965 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 802.159092 B = 2732.122349 C = 3514.752675 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.119 3.881 2 N -0.414 5.414 3 C -0.328 4.328 4 H 0.127 0.873 5 C 0.034 3.966 6 N -0.862 5.862 7 Si 0.933 3.067 8 H -0.264 1.264 9 H -0.277 1.277 10 H -0.278 1.278 11 C 0.494 3.506 12 O -0.584 6.584 13 C 0.012 3.988 14 O -0.129 6.129 15 C -0.049 4.049 16 C -0.208 4.208 17 C -0.103 4.103 18 Cl -0.029 7.029 19 H 0.041 0.959 20 H 0.073 0.927 21 H 0.068 0.932 22 H 0.271 0.729 23 H 0.202 0.798 24 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.093 -1.473 0.907 8.275 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.023 4.023 2 N -0.129 5.129 3 C -0.456 4.456 4 H 0.144 0.856 5 C -0.172 4.172 6 N -0.501 5.501 7 Si 0.759 3.241 8 H -0.188 1.188 9 H -0.202 1.202 10 H -0.203 1.203 11 C 0.283 3.717 12 O -0.473 6.473 13 C -0.043 4.043 14 O -0.023 6.023 15 C -0.118 4.118 16 C -0.228 4.228 17 C -0.134 4.134 18 Cl -0.001 7.001 19 H 0.060 0.940 20 H 0.092 0.908 21 H 0.087 0.913 22 H 0.082 0.918 23 H 0.219 0.781 24 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 7.397 -1.627 0.816 7.617 hybrid contribution 0.621 0.714 -0.016 0.946 sum 8.018 -0.913 0.800 8.109 Atomic orbital electron populations 1.21718 0.78441 0.98313 1.03823 1.43836 1.06989 1.04834 1.57219 1.20618 0.93987 0.82841 1.48140 0.85596 1.25447 0.95782 1.00173 0.95770 1.70240 1.06203 1.27843 1.45816 0.85746 0.79753 0.80403 0.78223 1.18827 1.20237 1.20331 1.16216 0.82633 0.84770 0.88127 1.90760 1.66065 1.30803 1.59651 1.22750 0.92459 0.83009 1.06082 1.84644 1.15984 1.32731 1.68984 1.24171 0.86568 0.95311 1.05793 1.21380 0.96381 0.94819 1.10212 1.21184 0.92938 0.86825 1.12443 1.98307 1.90747 1.13934 1.97084 0.94003 0.90839 0.91303 0.91764 0.78107 0.83068 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.12 2.97 8.85 59.85 0.53 3.50 14 2 N -0.41 -10.88 3.02 -123.80 -0.37 -11.25 14 3 C -0.33 -8.43 9.35 -15.02 -0.14 -8.57 14 4 H 0.13 3.11 4.15 -53.75 -0.22 2.89 14 5 C 0.03 0.83 5.46 -17.45 -0.10 0.74 14 6 N -0.86 -21.76 9.44 55.50 0.52 -21.23 14 7 Si 0.93 19.01 29.56 -169.99 -5.02 13.99 14 8 H -0.26 -5.22 7.11 56.52 0.40 -4.82 14 9 H -0.28 -5.62 7.11 56.52 0.40 -5.22 14 10 H -0.28 -5.60 7.11 56.52 0.40 -5.20 14 11 C 0.49 12.79 7.59 -12.99 -0.10 12.70 14 12 O -0.58 -15.94 14.98 5.14 0.08 -15.87 14 13 C 0.01 0.27 6.86 -36.46 -0.25 0.02 14 14 O -0.13 -2.67 7.17 4.71 0.03 -2.64 14 15 C -0.05 -0.77 12.05 29.61 0.36 -0.41 14 16 C -0.21 -3.37 10.87 -39.87 -0.43 -3.80 14 17 C -0.10 -2.09 6.80 -38.89 -0.26 -2.35 14 18 Cl -0.03 -0.57 27.92 -51.86 -1.45 -2.02 14 19 H 0.04 1.01 6.94 -51.93 -0.36 0.65 14 20 H 0.07 1.85 7.01 -51.93 -0.36 1.48 14 21 H 0.07 1.74 7.09 -51.93 -0.37 1.38 14 22 H 0.27 6.40 8.31 -40.82 -0.34 6.06 14 23 H 0.20 2.15 8.06 -52.49 -0.42 1.73 14 24 H 0.15 1.93 8.06 -52.49 -0.42 1.50 14 LS Contribution 230.85 15.07 3.48 3.48 Total: -1.00 -28.86 230.85 -4.42 -33.28 By element: Atomic # 1 Polarization: 1.73 SS G_CDS: -1.30 Total: 0.44 kcal Atomic # 6 Polarization: 2.21 SS G_CDS: -0.40 Total: 1.82 kcal Atomic # 7 Polarization: -32.64 SS G_CDS: 0.15 Total: -32.49 kcal Atomic # 8 Polarization: -18.61 SS G_CDS: 0.11 Total: -18.50 kcal Atomic # 14 Polarization: 19.01 SS G_CDS: -5.02 Total: 13.99 kcal Atomic # 17 Polarization: -0.57 SS G_CDS: -1.45 Total: -2.02 kcal Total LS contribution 3.48 Total: 3.48 kcal Total: -28.86 -4.42 -33.28 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260165742.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.153 kcal (2) G-P(sol) polarization free energy of solvation -28.861 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.292 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.423 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.284 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.130 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.17 seconds