Wall clock time and date at job start Mon Mar 30 2020 03:18:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.38612 * 120.00334 * 2 1 4 4 N 1.32923 * 120.43905 * 0.02562 * 3 2 1 5 5 C 1.32529 * 121.14437 * 179.97438 * 4 3 2 6 6 O 1.35465 * 118.96466 * 179.97438 * 5 4 3 7 7 N 1.31862 * 122.06205 * 0.27318 * 5 4 3 8 8 C 1.34239 * 120.73963 * 359.44402 * 7 5 4 9 9 C 1.41457 * 120.60933 * 180.25625 * 8 7 5 10 10 H 1.07995 * 119.99946 * 180.28854 * 9 8 7 11 11 C 1.40083 * 119.99548 * 0.29141 * 9 8 7 12 12 N 1.30695 * 120.00258 * 359.97438 * 11 9 8 13 13 Si 1.86799 * 119.99752 * 180.02562 * 11 9 8 14 14 H 1.48505 * 109.47158 * 359.97438 * 13 11 9 15 15 H 1.48497 * 109.47148 * 119.99428 * 13 11 9 16 16 H 1.48499 * 109.46875 * 239.99856 * 13 11 9 17 17 C 1.39682 * 120.44276 * 179.97438 * 3 2 1 18 18 Cl 1.73595 * 120.92473 * 0.04987 * 17 3 2 19 19 H 1.09005 * 109.47028 * 59.99136 * 1 2 3 20 20 H 1.08991 * 109.47329 * 179.97438 * 1 2 3 21 21 H 1.09000 * 109.47065 * 299.99842 * 1 2 3 22 22 H 0.96999 * 120.00227 * 180.02562 * 2 1 3 23 23 H 0.96696 * 113.99993 * 90.00002 * 6 5 4 24 24 H 0.96996 * 119.99814 * 180.02562 * 12 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1581 1.2004 0.0000 4 7 1.5024 2.3566 0.0005 5 6 2.1509 3.5124 0.0010 6 8 1.4384 4.6645 0.0010 7 7 3.4680 3.5760 -0.0043 8 6 4.2090 2.4567 0.0007 9 6 5.6218 2.5281 0.0005 10 1 6.2083 1.6213 -0.0002 11 6 6.2599 3.7752 0.0011 12 7 5.5501 4.8725 0.0015 13 14 8.1255 3.8696 0.0001 14 1 8.6907 2.4963 -0.0008 15 1 8.5838 4.5947 -1.2122 16 1 8.5852 4.5928 1.2129 17 6 3.5549 1.2111 0.0005 18 17 4.4584 -0.2712 -0.0001 19 1 -0.3633 0.5140 -0.8899 20 1 -0.3633 -1.0276 -0.0005 21 1 -0.3633 0.5138 0.8900 22 1 1.9500 -0.8400 -0.0004 23 1 1.2311 4.9988 0.8844 24 1 5.9920 5.7360 0.0015 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261051901.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:18:38 Heat of formation + Delta-G solvation = 0.355247 kcal Electronic energy + Delta-G solvation = -13707.275804 eV Core-core repulsion = 11068.080061 eV Total energy + Delta-G solvation = -2639.195743 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 229.036 amu Computer time = 0.17 seconds Orbital eigenvalues (eV) -39.24517 -36.53714 -35.25821 -35.06294 -33.48946 -30.97931 -29.23075 -26.92818 -24.87066 -22.23714 -21.32090 -18.62679 -17.24859 -16.27369 -15.82455 -15.09780 -14.62126 -14.24903 -13.82156 -13.51768 -12.93539 -12.35614 -11.81129 -11.41317 -11.39888 -11.20143 -10.68310 -10.63510 -10.38874 -10.15686 -9.86022 -9.55959 -9.24657 -8.22005 -7.52286 -6.98090 -6.58727 -4.89830 2.40282 2.83433 3.01646 3.07408 3.18265 3.60246 3.80453 3.93957 4.50075 4.80079 5.57133 5.61857 6.02202 6.03052 6.19980 6.41436 6.84136 6.85333 7.05510 7.77426 7.98908 8.07214 8.15674 8.51428 8.72686 9.01591 9.94030 10.08090 Molecular weight = 229.04amu Principal moments of inertia in cm(-1) A = 0.029069 B = 0.011093 C = 0.008070 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 962.992548 B = 2523.456610 C = 3468.764205 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.112 3.888 2 N -0.735 5.735 3 C 0.463 3.537 4 N -0.662 5.662 5 C 0.510 3.490 6 O -0.474 6.474 7 N -0.527 5.527 8 C 0.305 3.695 9 C -0.396 4.396 10 H 0.100 0.900 11 C 0.065 3.935 12 N -0.694 5.694 13 Si 0.914 3.086 14 H -0.256 1.256 15 H -0.270 1.270 16 H -0.270 1.270 17 C -0.308 4.308 18 Cl -0.105 7.105 19 H 0.049 0.951 20 H 0.058 0.942 21 H 0.048 0.952 22 H 0.404 0.596 23 H 0.392 0.608 24 H 0.279 0.721 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.077 -4.645 1.687 5.360 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.033 4.033 2 N -0.372 5.372 3 C 0.225 3.775 4 N -0.407 5.407 5 C 0.201 3.799 6 O -0.275 6.275 7 N -0.261 5.261 8 C 0.179 3.821 9 C -0.428 4.428 10 H 0.118 0.882 11 C -0.164 4.164 12 N -0.314 5.314 13 Si 0.737 3.263 14 H -0.179 1.179 15 H -0.195 1.195 16 H -0.195 1.195 17 C -0.348 4.348 18 Cl -0.078 7.078 19 H 0.067 0.933 20 H 0.076 0.924 21 H 0.067 0.933 22 H 0.240 0.760 23 H 0.247 0.753 24 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -2.664 -3.618 1.066 4.618 hybrid contribution 1.260 -0.947 0.474 1.646 sum -1.404 -4.565 1.540 5.018 Atomic orbital electron populations 1.21229 0.80553 0.99995 1.01505 1.44078 1.05688 1.04769 1.82626 1.17471 0.85855 0.85772 0.88411 1.67042 1.41210 0.96839 1.35591 1.20093 0.85547 0.83179 0.91040 1.84601 1.73517 1.36501 1.32839 1.69076 1.03136 1.29950 1.23942 1.18084 0.93622 0.83290 0.87087 1.19883 0.89667 0.94082 1.39120 0.88154 1.26236 1.01327 0.95370 0.93450 1.70118 1.37372 0.98614 1.25291 0.86154 0.81337 0.80023 0.78820 1.17928 1.19505 1.19524 1.21561 0.89618 0.87794 1.35817 1.98161 1.75892 1.35508 1.98248 0.93274 0.92365 0.93325 0.76022 0.75286 0.91011 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 1.73 10.75 59.85 0.64 2.37 14 2 N -0.73 -13.77 5.82 -67.04 -0.39 -14.16 14 3 C 0.46 10.81 7.52 -154.75 -1.16 9.65 14 4 N -0.66 -16.25 9.70 -13.98 -0.14 -16.39 14 5 C 0.51 13.07 8.69 -91.46 -0.80 12.27 14 6 O -0.47 -10.57 13.64 -18.09 -0.25 -10.82 14 7 N -0.53 -14.57 8.06 -12.72 -0.10 -14.68 14 8 C 0.30 8.25 6.58 -84.66 -0.56 7.69 14 9 C -0.40 -10.24 8.88 -37.67 -0.33 -10.57 14 10 H 0.10 2.47 6.77 -52.49 -0.36 2.11 14 11 C 0.06 1.58 5.50 -17.34 -0.10 1.49 14 12 N -0.69 -17.79 11.52 55.55 0.64 -17.15 14 13 Si 0.91 17.83 29.56 -169.99 -5.02 12.81 14 14 H -0.26 -4.92 7.11 56.52 0.40 -4.52 14 15 H -0.27 -5.20 7.11 56.52 0.40 -4.80 14 16 H -0.27 -5.16 7.11 56.52 0.40 -4.75 14 17 C -0.31 -7.57 6.45 -38.12 -0.25 -7.82 14 18 Cl -0.11 -2.19 26.34 -51.86 -1.37 -3.56 14 19 H 0.05 0.80 8.14 -51.93 -0.42 0.37 14 20 H 0.06 0.67 8.14 -51.93 -0.42 0.25 14 21 H 0.05 0.77 8.14 -51.93 -0.42 0.35 14 22 H 0.40 6.84 7.62 -40.82 -0.31 6.52 14 23 H 0.39 6.58 9.06 45.56 0.41 6.99 14 24 H 0.28 6.39 8.29 -40.82 -0.34 6.05 14 LS Contribution 236.48 15.07 3.56 3.56 Total: -1.00 -30.45 236.48 -6.26 -36.72 By element: Atomic # 1 Polarization: 9.24 SS G_CDS: -0.66 Total: 8.58 kcal Atomic # 6 Polarization: 17.63 SS G_CDS: -2.55 Total: 15.08 kcal Atomic # 7 Polarization: -62.39 SS G_CDS: 0.01 Total: -62.38 kcal Atomic # 8 Polarization: -10.57 SS G_CDS: -0.25 Total: -10.82 kcal Atomic # 14 Polarization: 17.83 SS G_CDS: -5.02 Total: 12.81 kcal Atomic # 17 Polarization: -2.19 SS G_CDS: -1.37 Total: -3.56 kcal Total LS contribution 3.56 Total: 3.56 kcal Total: -30.45 -6.26 -36.72 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261051901.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.073 kcal (2) G-P(sol) polarization free energy of solvation -30.453 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.620 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.265 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.718 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.355 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.17 seconds