Wall clock time and date at job start Mon Mar 30 2020 03:28:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53004 * 109.46927 * 2 1 4 4 N 1.46503 * 109.47103 * 180.02562 * 3 2 1 5 5 C 1.37100 * 120.00222 * 263.37577 * 4 3 2 6 6 H 1.08000 * 119.99993 * 194.06485 * 5 4 3 7 7 C 1.38949 * 119.99931 * 14.06181 * 5 4 3 8 8 N 1.31418 * 119.99880 * 13.07889 * 7 5 4 9 9 Si 1.86798 * 120.00223 * 193.07673 * 7 5 4 10 10 H 1.48494 * 109.47165 * 60.00017 * 9 7 5 11 11 H 1.48495 * 109.47221 * 180.02562 * 9 7 5 12 12 H 1.48502 * 109.47164 * 300.00106 * 9 7 5 13 13 C 1.34770 * 119.99881 * 83.37424 * 4 3 2 14 14 O 1.21296 * 120.00259 * 3.73397 * 13 4 3 15 15 C 1.50698 * 120.00090 * 183.73105 * 13 4 3 16 16 C 1.53003 * 115.54990 * 67.29513 * 15 13 4 17 17 C 1.53005 * 117.50119 * 212.96049 * 15 13 4 18 18 C 1.52998 * 59.99946 * 107.51588 * 17 15 13 19 19 H 1.09002 * 117.50177 * 107.48752 * 18 17 15 20 20 F 1.39904 * 117.50129 * 252.51461 * 18 17 15 21 21 H 1.08999 * 109.46893 * 299.99140 * 1 2 3 22 22 H 1.09002 * 109.47387 * 59.99914 * 1 2 3 23 23 H 1.09006 * 109.46576 * 179.97438 * 1 2 3 24 24 H 1.09006 * 109.47263 * 240.00776 * 2 1 3 25 25 H 1.09001 * 109.47656 * 120.00819 * 2 1 3 26 26 H 1.08999 * 109.46632 * 60.00700 * 3 2 1 27 27 H 1.08999 * 109.47650 * 300.00297 * 3 2 1 28 28 H 0.97003 * 119.99669 * 179.97438 * 8 7 5 29 29 H 1.09000 * 109.46967 * 200.84156 * 16 15 13 30 30 H 1.09003 * 109.46781 * 320.83708 * 16 15 13 31 31 H 1.08995 * 109.47456 * 80.84037 * 16 15 13 32 32 H 1.08996 * 117.50074 * 215.00383 * 17 15 13 33 33 H 1.08998 * 117.49880 * 0.02562 * 17 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 7 3.5050 1.4426 -0.0006 5 6 4.1910 1.5794 1.1785 6 1 5.2467 1.8068 1.1657 7 6 3.5280 1.4255 2.3899 8 7 2.3228 0.9024 2.4175 9 14 4.3499 1.9622 3.9792 10 1 4.6485 3.4154 3.9158 11 1 3.4409 1.6925 5.1221 12 1 5.6138 1.2047 4.1632 13 6 4.1783 1.3081 -1.1603 14 8 3.5733 1.2551 -2.2103 15 6 5.6829 1.2236 -1.1526 16 6 6.2698 -0.0363 -0.5129 17 6 6.4304 1.8244 -2.3448 18 6 6.4635 2.5291 -0.9872 19 1 7.3950 2.4904 -0.4226 20 9 5.7257 3.7104 -0.8544 21 1 -0.3633 0.5137 0.8901 22 1 -0.3634 0.5138 -0.8900 23 1 -0.3633 -1.0278 -0.0005 24 1 1.8934 -0.5137 -0.8901 25 1 1.8934 -0.5139 0.8899 26 1 1.6766 1.9563 0.8901 27 1 1.6766 1.9565 -0.8899 28 1 1.8601 0.7946 3.2632 29 1 7.3037 0.1513 -0.2230 30 1 5.6873 -0.3007 0.3697 31 1 6.2366 -0.8569 -1.2295 32 1 7.3402 1.3221 -2.6734 33 1 5.8339 2.2810 -3.1346 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000399297482.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:28:15 Heat of formation + Delta-G solvation = -55.406913 kcal Electronic energy + Delta-G solvation = -17091.228844 eV Core-core repulsion = 14260.652135 eV Total energy + Delta-G solvation = -2830.576709 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 229.122 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -46.96326 -38.91940 -36.07128 -34.83405 -32.20700 -31.31217 -28.00964 -25.84408 -24.71438 -21.92601 -21.85197 -20.11982 -18.77645 -16.94987 -16.16833 -15.68940 -14.69770 -14.34563 -14.10747 -13.88847 -13.51391 -13.09976 -12.95457 -12.51404 -12.21785 -11.98185 -11.67535 -11.50339 -11.40308 -11.24255 -10.93596 -10.68527 -10.42140 -10.30648 -10.21709 -9.63206 -9.56518 -9.24172 -8.79859 -8.33322 -7.68684 -6.28945 -3.87235 3.10621 3.20303 3.22332 3.69238 4.06224 4.13471 4.59236 4.76066 5.07609 5.11367 5.42103 5.57619 5.86759 6.02509 6.14107 6.19653 6.20784 6.28886 6.44437 6.53008 6.59269 6.77088 6.81893 6.95540 7.07464 7.12884 7.35799 7.55113 7.78132 7.86211 8.49167 9.08977 9.56003 9.96051 10.65197 Molecular weight = 229.12amu Principal moments of inertia in cm(-1) A = 0.019882 B = 0.013863 C = 0.009547 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1407.986291 B = 2019.216872 C = 2932.005202 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.116 4.116 3 C 0.139 3.861 4 N -0.428 5.428 5 C -0.318 4.318 6 H 0.097 0.903 7 C 0.031 3.969 8 N -0.863 5.863 9 Si 0.920 3.080 10 H -0.274 1.274 11 H -0.284 1.284 12 H -0.274 1.274 13 C 0.485 3.515 14 O -0.607 6.607 15 C -0.128 4.128 16 C -0.108 4.108 17 C -0.174 4.174 18 C 0.030 3.970 19 H 0.127 0.873 20 F -0.179 7.179 21 H 0.052 0.948 22 H 0.036 0.964 23 H 0.037 0.963 24 H 0.030 0.970 25 H 0.094 0.906 26 H 0.104 0.896 27 H 0.031 0.969 28 H 0.267 0.733 29 H 0.054 0.946 30 H 0.084 0.916 31 H 0.057 0.943 32 H 0.106 0.894 33 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.294 -0.517 -0.765 5.373 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C -0.154 4.154 3 C 0.016 3.984 4 N -0.144 5.144 5 C -0.446 4.446 6 H 0.115 0.885 7 C -0.172 4.172 8 N -0.503 5.503 9 Si 0.747 3.253 10 H -0.199 1.199 11 H -0.209 1.209 12 H -0.199 1.199 13 C 0.272 3.728 14 O -0.494 6.494 15 C -0.132 4.132 16 C -0.165 4.165 17 C -0.212 4.212 18 C -0.006 4.006 19 H 0.145 0.855 20 F -0.159 7.159 21 H 0.071 0.929 22 H 0.055 0.945 23 H 0.056 0.944 24 H 0.048 0.952 25 H 0.112 0.888 26 H 0.122 0.878 27 H 0.050 0.950 28 H 0.078 0.922 29 H 0.073 0.927 30 H 0.103 0.897 31 H 0.076 0.924 32 H 0.124 0.876 33 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 4.786 -0.543 -1.068 4.934 hybrid contribution 0.338 0.343 0.927 1.045 sum 5.124 -0.200 -0.142 5.130 Atomic orbital electron populations 1.21574 0.97617 0.99666 1.00416 1.21751 0.93748 0.98440 1.01484 1.21356 0.79666 0.96909 1.00458 1.43671 1.05620 1.59775 1.05308 1.19654 0.95328 1.46917 0.82690 0.88520 1.25238 0.96331 0.96332 0.99316 1.70088 1.12917 1.40682 1.26584 0.86097 0.78871 0.79404 0.80933 1.19938 1.20904 1.19932 1.18802 0.86622 0.83137 0.84201 1.90518 1.69367 1.57843 1.31648 1.21967 0.94471 0.95388 1.01376 1.21260 0.99671 0.94110 1.01476 1.23676 1.02310 1.02797 0.92388 1.22233 0.95712 0.80929 1.01745 0.85544 1.92809 1.78882 1.47742 1.96488 0.92882 0.94507 0.94387 0.95171 0.88809 0.87840 0.95038 0.92201 0.92684 0.89674 0.92375 0.87608 0.87578 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.64 9.91 37.16 0.37 -2.27 16 2 C -0.12 -2.70 5.66 -26.73 -0.15 -2.85 16 3 C 0.14 3.49 4.54 -4.04 -0.02 3.48 16 4 N -0.43 -11.02 2.64 -114.81 -0.30 -11.32 16 5 C -0.32 -7.93 7.97 -14.93 -0.12 -8.05 16 6 H 0.10 2.31 5.78 -52.49 -0.30 2.01 16 7 C 0.03 0.76 5.13 -17.47 -0.09 0.67 16 8 N -0.86 -21.35 8.11 55.50 0.45 -20.90 16 9 Si 0.92 19.21 29.57 -169.99 -5.03 14.18 16 10 H -0.27 -5.80 7.11 56.52 0.40 -5.40 16 11 H -0.28 -5.93 7.11 56.52 0.40 -5.53 16 12 H -0.27 -5.59 7.11 56.52 0.40 -5.19 16 13 C 0.48 12.25 6.47 -10.99 -0.07 12.18 16 14 O -0.61 -16.96 16.41 5.54 0.09 -16.87 16 15 C -0.13 -2.60 1.36 -155.66 -0.21 -2.81 16 16 C -0.11 -1.87 9.38 37.16 0.35 -1.52 16 17 C -0.17 -2.98 9.76 -26.73 -0.26 -3.25 16 18 C 0.03 0.55 6.58 -26.73 -0.18 0.37 16 19 H 0.13 1.83 8.08 -51.93 -0.42 1.41 16 20 F -0.18 -3.86 17.13 2.25 0.04 -3.83 16 21 H 0.05 1.02 8.14 -51.93 -0.42 0.60 16 22 H 0.04 0.68 8.14 -51.93 -0.42 0.26 16 23 H 0.04 0.66 8.14 -51.93 -0.42 0.24 16 24 H 0.03 0.73 8.14 -51.93 -0.42 0.31 16 25 H 0.09 2.34 6.29 -51.93 -0.33 2.01 16 26 H 0.10 2.68 5.82 -51.93 -0.30 2.38 16 27 H 0.03 0.81 7.58 -51.93 -0.39 0.42 16 28 H 0.27 6.34 8.31 -40.82 -0.34 6.00 16 29 H 0.05 0.77 7.94 -51.93 -0.41 0.36 16 30 H 0.08 1.66 6.80 -51.93 -0.35 1.31 16 31 H 0.06 0.94 8.14 -51.93 -0.42 0.52 16 32 H 0.11 1.41 8.14 -51.93 -0.42 0.99 16 33 H 0.11 1.99 8.03 -51.93 -0.42 1.57 16 LS Contribution 275.42 15.07 4.15 4.15 Total: -1.00 -28.79 275.42 -5.58 -34.37 By element: Atomic # 1 Polarization: 8.86 SS G_CDS: -4.60 Total: 4.26 kcal Atomic # 6 Polarization: -3.66 SS G_CDS: -0.38 Total: -4.04 kcal Atomic # 7 Polarization: -32.37 SS G_CDS: 0.15 Total: -32.22 kcal Atomic # 8 Polarization: -16.96 SS G_CDS: 0.09 Total: -16.87 kcal Atomic # 9 Polarization: -3.86 SS G_CDS: 0.04 Total: -3.83 kcal Atomic # 14 Polarization: 19.21 SS G_CDS: -5.03 Total: 14.18 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -28.79 -5.58 -34.37 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000399297482.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.037 kcal (2) G-P(sol) polarization free energy of solvation -28.790 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.827 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.580 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.370 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.407 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds