Wall clock time and date at job start Mon Mar 30 2020 02:49:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42900 * 113.99681 * 2 1 4 4 H 1.08998 * 109.47231 * 30.00417 * 3 2 1 5 5 C 1.50705 * 109.46695 * 150.00135 * 3 2 1 6 6 H 1.08000 * 119.99772 * 120.00185 * 5 3 2 7 7 C 1.37876 * 120.00217 * 299.99332 * 5 3 2 8 8 N 1.31516 * 120.00156 * 179.97438 * 7 5 3 9 9 Si 1.86802 * 119.99732 * 0.02562 * 7 5 3 10 10 H 1.48507 * 109.47273 * 89.99485 * 9 7 5 11 11 H 1.48496 * 109.47095 * 209.99340 * 9 7 5 12 12 H 1.48497 * 109.47247 * 329.99555 * 9 7 5 13 13 C 1.50701 * 109.47466 * 269.99842 * 3 2 1 14 14 C 1.35374 * 126.13555 * 315.03217 * 13 3 2 15 15 Cl 1.73601 * 126.04420 * 359.93779 * 14 13 3 16 16 C 1.39928 * 107.90796 * 179.97438 * 14 13 3 17 17 N 1.30847 * 108.21156 * 359.75431 * 16 14 13 18 18 N 1.35042 * 126.13872 * 135.00100 * 13 3 2 19 19 C 1.46506 * 126.03304 * 359.97438 * 18 13 3 20 20 H 1.09005 * 109.47313 * 299.99919 * 1 2 3 21 21 H 1.09005 * 109.47041 * 59.99495 * 1 2 3 22 22 H 1.09002 * 109.47203 * 180.02562 * 1 2 3 23 23 H 0.96994 * 119.99765 * 179.97438 * 8 7 5 24 24 H 1.08002 * 125.89041 * 179.97438 * 16 14 13 25 25 H 1.09001 * 109.47060 * 90.00497 * 19 18 13 26 26 H 1.09004 * 109.47073 * 209.99986 * 19 18 13 27 27 H 1.09000 * 109.47212 * 330.00068 * 19 18 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3449 1.9993 0.5139 5 6 3.3386 1.2639 0.7104 6 1 4.2406 1.5420 0.1855 7 6 3.4025 0.8709 2.0305 8 7 4.5619 0.8341 2.6503 9 14 1.8424 0.3894 2.9381 10 1 1.6040 -1.0672 2.7744 11 1 1.9910 0.7076 4.3809 12 1 0.6921 1.1450 2.3805 13 6 2.2145 1.7645 -1.4208 14 6 2.7321 1.0271 -2.4313 15 17 3.2801 -0.6163 -2.3198 16 6 2.7479 1.8242 -3.5812 17 7 2.2528 2.9957 -3.2736 18 7 1.9137 2.9849 -1.9145 19 6 1.3296 4.0986 -1.1630 20 1 -0.3634 0.5138 0.8900 21 1 -0.3633 0.5139 -0.8900 22 1 -0.3634 -1.0277 0.0005 23 1 4.6067 0.5580 3.5790 24 1 3.1038 1.5231 -4.5555 25 1 2.1270 4.7053 -0.7340 26 1 0.7265 4.7120 -1.8325 27 1 0.7006 3.7071 -0.3635 RHF calculation, no. of doubly occupied orbitals= 39 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260527163.mol2 27 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:49:41 Heat of formation + Delta-G solvation = 35.783930 kcal Electronic energy + Delta-G solvation = -14520.053482 eV Core-core repulsion = 11920.508475 eV Total energy + Delta-G solvation = -2599.545007 eV No. of doubly occupied orbitals = 39 Molecular weight (most abundant/longest-lived isotopes) = 230.056 amu Computer time = 0.15 seconds Orbital eigenvalues (eV) -40.76124 -37.04432 -35.46250 -32.94758 -32.59040 -30.46671 -27.52154 -26.28421 -25.51078 -22.79999 -20.72409 -19.27446 -17.32138 -16.54001 -15.43010 -15.16468 -14.76766 -14.34286 -13.75072 -13.58486 -13.34240 -12.85055 -12.58477 -12.23647 -11.55211 -11.10500 -11.06077 -10.86197 -10.83364 -10.62324 -9.90705 -9.68147 -9.51328 -8.89805 -8.78342 -8.74132 -7.63984 -6.24691 -4.34694 2.31018 2.64289 3.17035 3.23842 3.33920 3.38211 3.52844 4.32628 4.61312 4.97294 5.27563 5.41867 5.47582 5.50434 5.69741 5.84447 5.89198 6.04610 6.12232 6.18416 6.55764 6.86596 7.27411 7.38141 7.99950 8.20618 8.33301 8.78351 9.33241 10.84563 Molecular weight = 230.06amu Principal moments of inertia in cm(-1) A = 0.026071 B = 0.012280 C = 0.011066 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1073.722553 B = 2279.603796 C = 2529.627727 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.362 6.362 3 C 0.241 3.759 4 H 0.031 0.969 5 C -0.504 4.504 6 H 0.085 0.915 7 C 0.090 3.910 8 N -0.878 5.878 9 Si 0.899 3.101 10 H -0.270 1.270 11 H -0.299 1.299 12 H -0.270 1.270 13 C 0.122 3.878 14 C -0.177 4.177 15 Cl -0.037 7.037 16 C 0.054 3.946 17 N -0.307 5.307 18 N -0.370 5.370 19 C 0.106 3.894 20 H 0.034 0.966 21 H 0.027 0.973 22 H 0.074 0.926 23 H 0.269 0.731 24 H 0.183 0.817 25 H 0.078 0.922 26 H 0.084 0.916 27 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.714 2.155 -6.360 10.227 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.280 6.280 3 C 0.183 3.817 4 H 0.048 0.952 5 C -0.541 4.541 6 H 0.103 0.897 7 C -0.116 4.116 8 N -0.514 5.514 9 Si 0.728 3.272 10 H -0.195 1.195 11 H -0.226 1.226 12 H -0.195 1.195 13 C -0.007 4.007 14 C -0.215 4.215 15 Cl -0.009 7.009 16 C -0.132 4.132 17 N -0.129 5.129 18 N -0.154 5.154 19 C -0.035 4.035 20 H 0.052 0.948 21 H 0.045 0.955 22 H 0.092 0.908 23 H 0.079 0.921 24 H 0.200 0.800 25 H 0.097 0.903 26 H 0.102 0.898 27 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -7.824 3.089 -6.543 10.657 hybrid contribution -0.610 -0.990 0.741 1.379 sum -8.434 2.099 -5.802 10.450 Atomic orbital electron populations 1.22801 0.85223 1.01519 0.98801 1.88378 1.16188 1.30297 1.93142 1.18983 0.95939 0.82667 0.84062 0.95205 1.20673 0.91215 1.46891 0.95352 0.89714 1.24951 0.96541 0.92923 0.97218 1.69897 1.24516 1.45118 1.11912 0.86592 0.83079 0.80268 0.77250 1.19538 1.22647 1.19533 1.22008 0.95837 0.84876 0.98019 1.20284 1.16176 0.90622 0.94380 1.98290 1.88625 1.15658 1.98331 1.23692 0.99926 0.90607 0.98974 1.77258 1.22336 1.21015 0.92298 1.48141 1.49553 1.10694 1.07013 1.21811 0.98920 0.87391 0.95404 0.94782 0.95466 0.90785 0.92098 0.79998 0.90339 0.89751 0.89607 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.25 10.18 101.05 1.03 1.28 15 2 O -0.36 -8.29 7.31 -35.23 -0.26 -8.55 15 3 C 0.24 5.59 1.64 -29.03 -0.05 5.54 15 4 H 0.03 0.67 5.47 -51.93 -0.28 0.39 15 5 C -0.50 -13.75 9.36 -34.44 -0.32 -14.08 15 6 H 0.08 2.57 7.98 -52.49 -0.42 2.15 15 7 C 0.09 2.50 5.47 -17.82 -0.10 2.40 15 8 N -0.88 -25.81 13.96 55.43 0.77 -25.03 15 9 Si 0.90 21.43 25.42 -169.99 -4.32 17.11 15 10 H -0.27 -6.53 7.11 56.52 0.40 -6.13 15 11 H -0.30 -7.07 7.11 56.52 0.40 -6.67 15 12 H -0.27 -5.91 5.08 56.52 0.29 -5.63 15 13 C 0.12 2.63 5.82 -82.20 -0.48 2.15 15 14 C -0.18 -3.68 6.56 -39.97 -0.26 -3.95 15 15 Cl -0.04 -0.77 28.17 -51.86 -1.46 -2.23 15 16 C 0.05 0.99 12.02 -17.34 -0.21 0.78 15 17 N -0.31 -5.83 12.57 30.64 0.39 -5.45 15 18 N -0.37 -7.10 4.02 -63.84 -0.26 -7.36 15 19 C 0.11 1.53 11.24 59.85 0.67 2.20 15 20 H 0.03 0.61 6.23 -51.93 -0.32 0.29 15 21 H 0.03 0.46 8.14 -51.93 -0.42 0.04 15 22 H 0.07 1.21 8.14 -51.93 -0.42 0.78 15 23 H 0.27 7.38 8.31 -40.82 -0.34 7.04 15 24 H 0.18 2.61 8.06 -52.49 -0.42 2.19 15 25 H 0.08 1.08 8.14 -51.93 -0.42 0.65 15 26 H 0.08 0.99 8.14 -51.93 -0.42 0.56 15 27 H 0.09 1.15 6.92 -51.93 -0.36 0.79 15 LS Contribution 248.56 15.07 3.75 3.75 Total: -1.00 -31.10 248.56 -3.85 -34.95 By element: Atomic # 1 Polarization: -0.79 SS G_CDS: -2.75 Total: -3.54 kcal Atomic # 6 Polarization: -3.95 SS G_CDS: 0.29 Total: -3.66 kcal Atomic # 7 Polarization: -38.74 SS G_CDS: 0.90 Total: -37.84 kcal Atomic # 8 Polarization: -8.29 SS G_CDS: -0.26 Total: -8.55 kcal Atomic # 14 Polarization: 21.43 SS G_CDS: -4.32 Total: 17.11 kcal Atomic # 17 Polarization: -0.77 SS G_CDS: -1.46 Total: -2.23 kcal Total LS contribution 3.75 Total: 3.75 kcal Total: -31.10 -3.85 -34.95 kcal The number of atoms in the molecule is 27 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260527163.mol2 27 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.734 kcal (2) G-P(sol) polarization free energy of solvation -31.096 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 39.638 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.854 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.950 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.784 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.15 seconds