Wall clock time and date at job start Mon Mar 30 2020 02:53:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31003 * 1 3 3 C 1.50697 * 120.00047 * 2 1 4 4 H 1.08999 * 110.54122 * 357.38648 * 3 2 1 5 5 C 1.54810 * 110.48821 * 234.76613 * 3 2 1 6 6 C 1.54991 * 102.09350 * 262.20800 * 5 3 2 7 7 H 1.08993 * 110.62131 * 81.47823 * 6 5 3 8 8 C 1.53002 * 110.61707 * 204.31975 * 6 5 3 9 9 Cl 1.80293 * 109.47260 * 184.99977 * 8 6 5 10 10 O 1.44378 * 103.49061 * 322.97120 * 6 5 3 11 11 C 1.43745 * 106.97348 * 40.06796 * 10 6 5 12 12 H 1.09000 * 109.88175 * 92.90294 * 11 10 6 13 13 C 1.53001 * 109.87879 * 214.05844 * 11 10 6 14 14 C 1.50696 * 109.47150 * 292.82862 * 13 11 10 15 15 H 1.08000 * 120.00045 * 359.97438 * 14 13 11 16 16 C 1.37876 * 120.00160 * 179.97438 * 14 13 11 17 17 N 1.31522 * 119.99769 * 0.02562 * 16 14 13 18 18 Si 1.86795 * 120.00241 * 180.02562 * 16 14 13 19 19 H 1.48500 * 109.47521 * 89.99931 * 18 16 14 20 20 H 1.48496 * 109.47231 * 210.00178 * 18 16 14 21 21 H 1.48504 * 109.46878 * 330.00024 * 18 16 14 22 22 H 1.07997 * 119.99959 * 180.02562 * 1 2 3 23 23 H 1.07998 * 119.99882 * 359.97438 * 1 2 3 24 24 H 1.08003 * 119.99279 * 180.02562 * 2 1 3 25 25 H 1.09005 * 110.90592 * 20.40774 * 5 3 2 26 26 H 1.09005 * 110.90412 * 144.00839 * 5 3 2 27 27 H 1.09003 * 109.47153 * 305.00268 * 8 6 5 28 28 H 1.09001 * 109.47516 * 64.99442 * 8 6 5 29 29 H 1.09001 * 109.46771 * 52.83067 * 13 11 10 30 30 H 1.09000 * 109.46847 * 172.82528 * 13 11 10 31 31 H 0.96999 * 119.99689 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0635 1.3051 0.0000 4 1 1.3717 2.1461 -0.0465 5 6 3.0590 1.3560 -1.1845 6 6 4.3902 0.9409 -0.5080 7 1 4.4517 -0.1433 -0.4148 8 6 5.5859 1.4811 -1.2951 9 17 7.1143 0.8598 -0.5679 10 8 4.3135 1.5596 0.7943 11 6 2.9584 1.4112 1.2502 12 1 2.8661 0.5058 1.8499 13 6 2.5517 2.6313 2.0789 14 6 3.3479 2.6577 3.3581 15 1 4.0712 1.8816 3.5601 16 6 3.1528 3.6726 4.2708 17 7 2.2716 4.6175 4.0251 18 14 4.1402 3.7057 5.8561 19 1 5.3929 4.4741 5.6432 20 1 3.3382 4.3528 6.9253 21 1 4.4744 2.3163 6.2601 22 1 -0.5400 -0.9353 0.0004 23 1 -0.5400 0.9353 0.0004 24 1 1.8499 -0.9354 -0.0004 25 1 2.7778 0.6432 -1.9598 26 1 3.1276 2.3648 -1.5918 27 1 5.5169 1.1521 -2.3320 28 1 5.5828 2.5705 -1.2587 29 1 2.7490 3.5395 1.5093 30 1 1.4888 2.5733 2.3135 31 1 2.1346 5.3317 4.6670 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000308075156.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:53:22 Heat of formation + Delta-G solvation = -53.439485 kcal Electronic energy + Delta-G solvation = -14214.156082 eV Core-core repulsion = 11714.282400 eV Total energy + Delta-G solvation = -2499.873682 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 230.081 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -39.35344 -35.77721 -34.26376 -33.22589 -31.53504 -30.10407 -28.11659 -24.86750 -22.59156 -21.17552 -20.26261 -19.51799 -16.45974 -15.86362 -15.24607 -14.96984 -14.49279 -14.09174 -13.73138 -13.42522 -12.87768 -12.50315 -11.96503 -11.70054 -11.52988 -11.37462 -11.01347 -10.86928 -10.64386 -10.49339 -10.26285 -10.19186 -10.07368 -9.69783 -9.26403 -8.79782 -8.76455 -8.31144 -5.94294 -3.94047 2.40860 2.50143 3.38597 3.43994 3.48717 4.23101 4.53147 4.79964 4.90186 5.03578 5.18927 5.26706 5.40910 5.42744 5.58149 5.69991 5.73067 5.91202 6.01765 6.04568 6.22955 6.62589 6.77771 6.82035 7.00291 7.38859 7.66684 7.89891 8.04225 8.47279 9.10666 9.68704 11.17390 Molecular weight = 230.08amu Principal moments of inertia in cm(-1) A = 0.018261 B = 0.009124 C = 0.006527 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1532.946772 B = 3068.035098 C = 4288.969411 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 C -0.138 4.138 3 C -0.098 4.098 4 H 0.090 0.910 5 C -0.139 4.139 6 C 0.061 3.939 7 H 0.071 0.929 8 C -0.022 4.022 9 Cl -0.183 7.183 10 O -0.343 6.343 11 C 0.094 3.906 12 H 0.058 0.942 13 C 0.026 3.974 14 C -0.506 4.506 15 H 0.058 0.942 16 C 0.055 3.945 17 N -0.900 5.900 18 Si 0.892 3.108 19 H -0.281 1.281 20 H -0.288 1.288 21 H -0.274 1.274 22 H 0.094 0.906 23 H 0.097 0.903 24 H 0.105 0.895 25 H 0.076 0.924 26 H 0.079 0.921 27 H 0.099 0.901 28 H 0.100 0.900 29 H 0.024 0.976 30 H 0.029 0.971 31 H 0.259 0.741 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.001 -7.826 -12.392 14.691 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.231 4.231 2 C -0.156 4.156 3 C -0.116 4.116 4 H 0.108 0.892 5 C -0.177 4.177 6 C 0.002 3.998 7 H 0.089 0.911 8 C -0.085 4.085 9 Cl -0.156 7.156 10 O -0.262 6.262 11 C 0.037 3.963 12 H 0.076 0.924 13 C -0.011 4.011 14 C -0.544 4.544 15 H 0.076 0.924 16 C -0.146 4.146 17 N -0.540 5.540 18 Si 0.720 3.280 19 H -0.207 1.207 20 H -0.214 1.214 21 H -0.199 1.199 22 H 0.112 0.888 23 H 0.116 0.884 24 H 0.123 0.877 25 H 0.095 0.905 26 H 0.097 0.903 27 H 0.117 0.883 28 H 0.119 0.881 29 H 0.042 0.958 30 H 0.047 0.953 31 H 0.069 0.931 Dipole moment (debyes) X Y Z Total from point charges 1.212 -7.607 -12.136 14.374 hybrid contribution 0.345 -0.039 0.832 0.902 sum 1.557 -7.645 -11.303 13.735 Atomic orbital electron populations 1.23810 0.95907 1.01653 1.01774 1.22872 0.95882 0.97678 0.99175 1.21896 0.97872 0.96199 0.95673 0.89165 1.23144 0.94294 1.02344 0.97914 1.23279 0.92835 0.97439 0.86236 0.91091 1.24381 0.83953 1.02468 0.97707 1.98712 1.40494 1.89660 1.86757 1.89124 1.29044 1.77974 1.30086 1.23074 0.79285 1.01371 0.92620 0.92359 1.19296 0.96570 0.91102 0.94162 1.21165 1.21253 1.09504 1.02512 0.92390 1.24989 0.95456 0.95659 0.98455 1.69959 1.34652 1.13201 1.36218 0.86585 0.80065 0.78182 0.83141 1.20682 1.21386 1.19884 0.88775 0.88446 0.87687 0.90538 0.90280 0.88276 0.88100 0.95796 0.95306 0.93126 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -2.53 14.33 29.01 0.42 -2.12 16 2 C -0.14 -1.95 8.48 -36.03 -0.31 -2.26 16 3 C -0.10 -1.59 3.00 -90.24 -0.27 -1.86 16 4 H 0.09 1.53 7.41 -51.93 -0.38 1.15 16 5 C -0.14 -1.86 6.13 -24.73 -0.15 -2.02 16 6 C 0.06 0.92 3.38 -25.68 -0.09 0.83 16 7 H 0.07 1.02 8.14 -51.93 -0.42 0.60 16 8 C -0.02 -0.29 6.41 37.16 0.24 -0.05 16 9 Cl -0.18 -2.73 29.14 -51.86 -1.51 -4.24 16 10 O -0.34 -7.16 10.71 -35.23 -0.38 -7.53 16 11 C 0.09 1.96 3.01 -26.15 -0.08 1.88 16 12 H 0.06 1.25 7.68 -51.93 -0.40 0.85 16 13 C 0.03 0.66 4.46 -27.88 -0.12 0.54 16 14 C -0.51 -14.70 8.94 -34.44 -0.31 -15.01 16 15 H 0.06 1.69 7.74 -52.49 -0.41 1.29 16 16 C 0.05 1.60 5.46 -17.82 -0.10 1.51 16 17 N -0.90 -27.34 13.29 55.43 0.74 -26.60 16 18 Si 0.89 22.45 29.54 -169.99 -5.02 17.43 16 19 H -0.28 -7.02 7.11 56.52 0.40 -6.62 16 20 H -0.29 -7.11 7.11 56.52 0.40 -6.71 16 21 H -0.27 -6.78 7.11 56.52 0.40 -6.37 16 22 H 0.09 1.04 8.06 -52.49 -0.42 0.61 16 23 H 0.10 1.27 7.87 -52.49 -0.41 0.86 16 24 H 0.11 1.36 8.06 -52.48 -0.42 0.93 16 25 H 0.08 0.83 7.86 -51.93 -0.41 0.42 16 26 H 0.08 1.02 8.06 -51.93 -0.42 0.60 16 27 H 0.10 0.92 8.14 -51.93 -0.42 0.50 16 28 H 0.10 1.32 8.14 -51.93 -0.42 0.90 16 29 H 0.02 0.66 8.14 -51.93 -0.42 0.24 16 30 H 0.03 0.78 8.14 -51.93 -0.42 0.35 16 31 H 0.26 7.45 8.31 -40.82 -0.34 7.11 16 LS Contribution 279.34 15.07 4.21 4.21 Total: -1.00 -31.31 279.34 -7.26 -38.57 By element: Atomic # 1 Polarization: 1.24 SS G_CDS: -4.52 Total: -3.29 kcal Atomic # 6 Polarization: -17.78 SS G_CDS: -0.77 Total: -18.55 kcal Atomic # 7 Polarization: -27.34 SS G_CDS: 0.74 Total: -26.60 kcal Atomic # 8 Polarization: -7.16 SS G_CDS: -0.38 Total: -7.53 kcal Atomic # 14 Polarization: 22.45 SS G_CDS: -5.02 Total: 17.43 kcal Atomic # 17 Polarization: -2.73 SS G_CDS: -1.51 Total: -4.24 kcal Total LS contribution 4.21 Total: 4.21 kcal Total: -31.31 -7.26 -38.57 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000308075156.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.870 kcal (2) G-P(sol) polarization free energy of solvation -31.314 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.184 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.256 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.570 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.439 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds