Wall clock time and date at job start Mon Mar 30 2020 03:24:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.30112 * 124.95288 * 2 1 4 4 C 1.35789 * 109.64303 * 180.02562 * 3 2 1 5 5 C 1.39740 * 133.59921 * 179.97438 * 4 3 2 6 6 C 1.36597 * 119.88637 * 179.97438 * 5 4 3 7 7 C 1.38774 * 120.66915 * 0.02562 * 6 5 4 8 8 C 1.37850 * 120.45483 * 359.97438 * 7 6 5 9 9 C 1.38838 * 119.68656 * 0.02562 * 8 7 6 10 10 N 1.36038 * 124.94978 * 180.02562 * 2 1 3 11 11 C 1.46502 * 126.34850 * 0.02562 * 10 2 1 12 12 H 1.08999 * 109.47293 * 4.49145 * 11 10 2 13 13 C 1.52993 * 109.47234 * 244.48694 * 11 10 2 14 14 C 1.50702 * 109.47175 * 124.48522 * 11 10 2 15 15 H 1.08003 * 119.99967 * 0.02562 * 14 11 10 16 16 C 1.37881 * 119.99917 * 180.02562 * 14 11 10 17 17 N 1.31507 * 120.00297 * 0.02562 * 16 14 11 18 18 Si 1.86806 * 119.99758 * 180.02562 * 16 14 11 19 19 H 1.48500 * 109.47161 * 90.00110 * 18 16 14 20 20 H 1.48501 * 109.46618 * 209.99896 * 18 16 14 21 21 H 1.48503 * 109.47089 * 329.99826 * 18 16 14 22 22 H 1.09003 * 109.46747 * 264.68811 * 1 2 3 23 23 H 1.08998 * 109.46766 * 24.68611 * 1 2 3 24 24 H 1.08996 * 109.47098 * 144.69245 * 1 2 3 25 25 H 1.08001 * 120.05401 * 359.97438 * 5 4 3 26 26 H 1.08004 * 119.66412 * 179.72611 * 6 5 4 27 27 H 1.08005 * 119.77287 * 179.97438 * 7 6 5 28 28 H 1.07996 * 120.16119 * 180.02562 * 8 7 6 29 29 H 1.09004 * 109.47150 * 173.91083 * 13 11 10 30 30 H 1.08995 * 109.47410 * 293.90754 * 13 11 10 31 31 H 1.09003 * 109.47017 * 53.90964 * 13 11 10 32 32 H 0.96996 * 120.00408 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2524 1.0664 0.0000 4 6 3.5621 0.7079 -0.0006 5 6 4.7588 1.4295 -0.0013 6 6 5.9532 0.7668 -0.0012 7 6 5.9931 -0.6204 -0.0010 8 6 4.8254 -1.3529 -0.0003 9 6 3.6019 -0.6966 -0.0004 10 7 2.2863 -1.1150 -0.0005 11 6 1.8166 -2.5027 -0.0016 12 1 0.7297 -2.5183 -0.0825 13 6 2.2411 -3.1859 1.2998 14 6 2.4179 -3.2357 -1.1731 15 1 3.0838 -2.7195 -1.8489 16 6 2.1180 -4.5651 -1.3821 17 7 1.3069 -5.1935 -0.5595 18 14 2.8640 -5.4738 -2.8338 19 1 4.1538 -6.0857 -2.4249 20 1 1.9315 -6.5385 -3.2834 21 1 3.0996 -4.5196 -3.9470 22 1 -0.3633 -0.0951 1.0233 23 1 -0.3633 0.9337 -0.4292 24 1 -0.3633 -0.8386 -0.5939 25 1 4.7393 2.5093 -0.0019 26 1 6.8760 1.3281 -0.0062 27 1 6.9456 -1.1295 -0.0014 28 1 4.8619 -2.4323 0.0003 29 1 1.8009 -4.1820 1.3476 30 1 3.3276 -3.2671 1.3300 31 1 1.8971 -2.5955 2.1490 32 1 1.0956 -6.1286 -0.7067 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000048246947.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:24:41 Heat of formation + Delta-G solvation = 58.866747 kcal Electronic energy + Delta-G solvation = -15900.019239 eV Core-core repulsion = 13439.741121 eV Total energy + Delta-G solvation = -2460.278117 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 230.111 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -41.39270 -36.81859 -34.94896 -32.30971 -30.81601 -29.98256 -28.47939 -26.91911 -25.48169 -22.42953 -21.45285 -20.88337 -19.09680 -16.97379 -16.49282 -15.78651 -14.80675 -14.73387 -14.57337 -13.55691 -13.26740 -12.81287 -12.57981 -12.47542 -12.19328 -12.05329 -11.47579 -11.36860 -11.33917 -11.06932 -10.80490 -10.66942 -10.48207 -10.26469 -9.74874 -9.29565 -9.09442 -8.71317 -7.53812 -7.33798 -6.35292 -4.44496 1.62450 2.23050 3.14080 3.21454 3.25515 3.49623 3.67597 4.20556 4.53647 4.77783 4.97222 5.26064 5.52093 5.65920 5.73806 5.87514 5.99958 6.10866 6.15032 6.22539 6.34074 6.43378 6.58795 6.63804 6.80064 7.03568 7.09599 7.25170 7.34065 7.48733 7.56645 7.63542 7.89489 8.10770 8.59593 8.67974 9.23887 10.70418 Molecular weight = 230.11amu Principal moments of inertia in cm(-1) A = 0.024739 B = 0.010122 C = 0.008159 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1131.548379 B = 2765.689401 C = 3430.963775 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 C 0.270 3.730 3 N -0.520 5.520 4 C 0.034 3.966 5 C -0.080 4.080 6 C -0.138 4.138 7 C -0.131 4.131 8 C -0.085 4.085 9 C 0.066 3.934 10 N -0.452 5.452 11 C 0.256 3.744 12 H 0.062 0.938 13 C -0.148 4.148 14 C -0.534 4.534 15 H 0.066 0.934 16 C 0.071 3.929 17 N -0.886 5.886 18 Si 0.904 3.096 19 H -0.277 1.277 20 H -0.283 1.283 21 H -0.272 1.272 22 H 0.079 0.921 23 H 0.086 0.914 24 H 0.083 0.917 25 H 0.117 0.883 26 H 0.117 0.883 27 H 0.119 0.881 28 H 0.128 0.872 29 H 0.098 0.902 30 H 0.040 0.960 31 H 0.016 0.984 32 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.728 5.594 1.750 6.465 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C 0.005 3.995 3 N -0.242 5.242 4 C -0.086 4.086 5 C -0.100 4.100 6 C -0.158 4.158 7 C -0.151 4.151 8 C -0.105 4.105 9 C -0.047 4.047 10 N -0.137 5.137 11 C 0.156 3.844 12 H 0.079 0.921 13 C -0.206 4.206 14 C -0.573 4.573 15 H 0.084 0.916 16 C -0.133 4.133 17 N -0.523 5.523 18 Si 0.731 3.269 19 H -0.202 1.202 20 H -0.209 1.209 21 H -0.196 1.196 22 H 0.098 0.902 23 H 0.105 0.895 24 H 0.102 0.898 25 H 0.135 0.865 26 H 0.135 0.865 27 H 0.137 0.863 28 H 0.146 0.854 29 H 0.117 0.883 30 H 0.059 0.941 31 H 0.035 0.965 32 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 2.252 6.046 1.782 6.693 hybrid contribution 0.658 -1.501 -0.768 1.810 sum 2.909 4.545 1.015 5.491 Atomic orbital electron populations 1.20287 0.85296 1.04181 1.03388 1.23463 0.95636 0.81650 0.98752 1.70317 1.00773 1.27833 1.25304 1.19115 0.92080 0.90899 1.06520 1.19782 0.89477 0.98796 1.01896 1.20433 0.96823 0.94348 1.04205 1.20747 0.97010 0.93820 1.03508 1.20235 0.89154 1.00184 1.00909 1.18818 0.86381 0.94154 1.05318 1.46192 1.03848 1.09097 1.54599 1.19350 0.96479 0.72686 0.95842 0.92061 1.22125 1.00665 1.02934 0.94866 1.21220 1.30065 0.95655 1.10314 0.91609 1.24865 0.94634 0.97035 0.96765 1.69853 1.34446 1.11393 1.36651 0.86385 0.79075 0.79334 0.82154 1.20233 1.20850 1.19648 0.90239 0.89518 0.89844 0.86544 0.86500 0.86292 0.85394 0.88336 0.94124 0.96538 0.92248 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -1.16 9.93 36.01 0.36 -0.81 16 2 C 0.27 5.64 7.85 -154.82 -1.22 4.42 16 3 N -0.52 -11.31 11.27 -8.23 -0.09 -11.40 16 4 C 0.03 0.74 7.23 -84.70 -0.61 0.12 16 5 C -0.08 -1.45 10.05 -39.61 -0.40 -1.84 16 6 C -0.14 -2.21 9.96 -39.98 -0.40 -2.61 16 7 C -0.13 -2.22 10.03 -39.53 -0.40 -2.61 16 8 C -0.08 -1.72 9.26 -39.50 -0.37 -2.08 16 9 C 0.07 1.46 6.14 -83.99 -0.52 0.95 16 10 N -0.45 -10.23 2.65 -105.33 -0.28 -10.51 16 11 C 0.26 6.06 2.90 -69.08 -0.20 5.86 16 12 H 0.06 1.48 6.71 -51.93 -0.35 1.13 16 13 C -0.15 -3.36 8.97 37.15 0.33 -3.03 16 14 C -0.53 -13.76 7.91 -34.44 -0.27 -14.03 16 15 H 0.07 1.78 7.56 -52.48 -0.40 1.38 16 16 C 0.07 1.81 5.30 -17.82 -0.09 1.71 16 17 N -0.89 -23.03 11.39 55.43 0.63 -22.40 16 18 Si 0.90 20.21 29.54 -169.99 -5.02 15.19 16 19 H -0.28 -6.13 7.11 56.52 0.40 -5.73 16 20 H -0.28 -6.26 7.11 56.52 0.40 -5.86 16 21 H -0.27 -6.16 7.11 56.52 0.40 -5.76 16 22 H 0.08 1.12 8.14 -51.93 -0.42 0.69 16 23 H 0.09 1.20 8.14 -51.93 -0.42 0.78 16 24 H 0.08 1.32 7.21 -51.93 -0.37 0.95 16 25 H 0.12 1.85 8.06 -52.49 -0.42 1.42 16 26 H 0.12 1.47 8.06 -52.48 -0.42 1.05 16 27 H 0.12 1.65 8.06 -52.48 -0.42 1.23 16 28 H 0.13 2.66 7.13 -52.49 -0.37 2.29 16 29 H 0.10 2.38 6.26 -51.93 -0.33 2.05 16 30 H 0.04 0.92 7.07 -51.93 -0.37 0.55 16 31 H 0.02 0.34 8.14 -51.93 -0.42 -0.09 16 32 H 0.27 6.64 8.31 -40.82 -0.34 6.30 16 LS Contribution 270.54 15.07 4.08 4.08 Total: -1.00 -28.26 270.54 -8.32 -36.58 By element: Atomic # 1 Polarization: 6.26 SS G_CDS: -3.86 Total: 2.40 kcal Atomic # 6 Polarization: -10.16 SS G_CDS: -3.78 Total: -13.94 kcal Atomic # 7 Polarization: -44.56 SS G_CDS: 0.26 Total: -44.30 kcal Atomic # 14 Polarization: 20.21 SS G_CDS: -5.02 Total: 15.19 kcal Total LS contribution 4.08 Total: 4.08 kcal Total: -28.26 -8.32 -36.58 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000048246947.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.446 kcal (2) G-P(sol) polarization free energy of solvation -28.259 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.187 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.320 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.580 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.867 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds