Wall clock time and date at job start Mon Mar 30 2020 03:11:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 N 1.30110 * 124.95390 * 2 1 4 4 C 1.35787 * 109.64483 * 179.97438 * 3 2 1 5 5 C 1.39735 * 133.60090 * 179.97438 * 4 3 2 6 6 C 1.36603 * 119.88474 * 179.72469 * 5 4 3 7 7 C 1.38783 * 120.66827 * 0.28758 * 6 5 4 8 8 C 1.50702 * 119.77051 * 179.97438 * 7 6 5 9 9 C 1.37848 * 120.45026 * 0.02562 * 7 6 5 10 10 C 1.38833 * 119.69197 * 359.97438 * 9 7 6 11 11 N 1.36053 * 124.94724 * 180.62582 * 2 1 3 12 12 C 1.46503 * 126.34878 * 359.41420 * 11 2 1 13 13 C 1.50703 * 109.47017 * 270.83358 * 12 11 2 14 14 H 1.07998 * 120.00218 * 0.02562 * 13 12 11 15 15 C 1.37877 * 119.99812 * 179.97438 * 13 12 11 16 16 N 1.31512 * 120.00029 * 0.02562 * 15 13 12 17 17 Si 1.86798 * 119.99738 * 180.02562 * 15 13 12 18 18 H 1.48493 * 109.47504 * 90.00170 * 17 15 13 19 19 H 1.48503 * 109.46929 * 210.00074 * 17 15 13 20 20 H 1.48504 * 109.47029 * 329.99741 * 17 15 13 21 21 H 1.08999 * 109.47089 * 90.02190 * 1 2 3 22 22 H 1.09000 * 109.47628 * 210.02535 * 1 2 3 23 23 H 1.09007 * 109.46864 * 330.02673 * 1 2 3 24 24 H 1.08002 * 120.06112 * 0.02562 * 5 4 3 25 25 H 1.07994 * 119.66831 * 180.30197 * 6 5 4 26 26 H 1.08997 * 109.47434 * 89.99688 * 8 7 6 27 27 H 1.09005 * 109.46735 * 209.99536 * 8 7 6 28 28 H 1.09001 * 109.47297 * 329.99133 * 8 7 6 29 29 H 1.08002 * 120.15281 * 179.97438 * 9 7 6 30 30 H 1.09001 * 109.46744 * 30.83013 * 12 11 2 31 31 H 1.08990 * 109.47254 * 150.83380 * 12 11 2 32 32 H 0.96997 * 119.99786 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2524 1.0664 0.0000 4 6 3.5621 0.7079 0.0006 5 6 4.7587 1.4295 0.0004 6 6 5.9532 0.7667 0.0068 7 6 5.9930 -0.6206 0.0076 8 6 7.3220 -1.3310 0.0142 9 6 4.8252 -1.3530 0.0013 10 6 3.6018 -0.6966 -0.0053 11 7 2.2863 -1.1151 -0.0122 12 6 1.8166 -2.5028 -0.0153 13 6 1.6478 -2.9792 1.4045 14 1 1.8680 -2.3146 2.2268 15 6 1.2113 -4.2631 1.6536 16 7 0.9427 -5.0722 0.6522 17 14 1.0015 -4.8533 3.4134 18 1 -0.3800 -4.5604 3.8724 19 1 1.2443 -6.3170 3.4768 20 1 1.9735 -4.1518 4.2899 21 1 -0.3633 -0.0004 -1.0277 22 1 -0.3634 -0.8897 0.5142 23 1 -0.3633 0.8903 0.5135 24 1 4.7393 2.5093 0.0000 25 1 6.8758 1.3278 0.0116 26 1 7.6376 -1.5018 1.0434 27 1 7.2252 -2.2875 -0.4997 28 1 8.0644 -0.7177 -0.4966 29 1 4.8617 -2.4324 0.0016 30 1 0.8598 -2.5613 -0.5343 31 1 2.5457 -3.1321 -0.5254 32 1 0.6352 -5.9753 0.8274 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000095922508.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:11:46 Heat of formation + Delta-G solvation = 50.450950 kcal Electronic energy + Delta-G solvation = -15490.654129 eV Core-core repulsion = 13030.011076 eV Total energy + Delta-G solvation = -2460.643054 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 230.111 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -41.39440 -37.28919 -34.17301 -32.40574 -31.53808 -30.29211 -28.48756 -27.16546 -25.10851 -23.39130 -21.46231 -20.79664 -19.03479 -16.85757 -16.53163 -16.01794 -14.76828 -14.73840 -14.43651 -13.58288 -13.31898 -13.27635 -12.67749 -12.61866 -12.26136 -12.15169 -11.88019 -11.61456 -11.35650 -11.32768 -10.93765 -10.81639 -10.58701 -10.29550 -10.06632 -9.30789 -9.27466 -8.73967 -7.55882 -7.32331 -6.36170 -4.45529 1.54991 2.14174 3.14335 3.21386 3.25387 3.44553 3.66927 4.21242 4.42729 4.78243 4.97684 5.19171 5.28799 5.55631 5.58242 5.82533 5.87370 5.93041 5.97025 6.04245 6.12255 6.19278 6.32070 6.37747 6.51996 6.81560 6.88093 7.06528 7.19720 7.37441 7.52453 7.57196 7.76889 8.01918 8.59946 8.65498 9.22844 10.70997 Molecular weight = 230.11amu Principal moments of inertia in cm(-1) A = 0.023413 B = 0.008802 C = 0.007057 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1195.634581 B = 3180.305285 C = 3966.559969 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 C 0.283 3.717 3 N -0.521 5.521 4 C 0.036 3.964 5 C -0.073 4.073 6 C -0.135 4.135 7 C -0.095 4.095 8 C -0.104 4.104 9 C -0.093 4.093 10 C 0.056 3.944 11 N -0.457 5.457 12 C 0.237 3.763 13 C -0.543 4.543 14 H 0.064 0.936 15 C 0.068 3.932 16 N -0.889 5.889 17 Si 0.905 3.095 18 H -0.276 1.276 19 H -0.282 1.282 20 H -0.271 1.271 21 H 0.078 0.922 22 H 0.090 0.910 23 H 0.085 0.915 24 H 0.119 0.881 25 H 0.119 0.881 26 H 0.065 0.935 27 H 0.062 0.938 28 H 0.061 0.939 29 H 0.121 0.879 30 H 0.052 0.948 31 H 0.046 0.954 32 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.473 6.281 -1.701 8.503 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C 0.017 3.983 3 N -0.243 5.243 4 C -0.085 4.085 5 C -0.093 4.093 6 C -0.155 4.155 7 C -0.097 4.097 8 C -0.161 4.161 9 C -0.113 4.113 10 C -0.057 4.057 11 N -0.142 5.142 12 C 0.119 3.881 13 C -0.581 4.581 14 H 0.082 0.918 15 C -0.136 4.136 16 N -0.526 5.526 17 Si 0.731 3.269 18 H -0.202 1.202 19 H -0.208 1.208 20 H -0.196 1.196 21 H 0.096 0.904 22 H 0.109 0.891 23 H 0.103 0.897 24 H 0.137 0.863 25 H 0.137 0.863 26 H 0.083 0.917 27 H 0.081 0.919 28 H 0.080 0.920 29 H 0.139 0.861 30 H 0.069 0.931 31 H 0.064 0.936 32 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges 5.036 6.724 -1.766 8.584 hybrid contribution 0.078 -1.388 0.951 1.684 sum 5.114 5.336 -0.815 7.436 Atomic orbital electron populations 1.20310 0.85084 1.04611 1.03298 1.23465 0.95714 0.81267 0.97830 1.70334 1.00682 1.27869 1.25453 1.19090 0.92165 0.90668 1.06534 1.19793 0.89379 0.98882 1.01243 1.20321 0.96947 0.93505 1.04755 1.19452 0.94211 0.93486 1.02540 1.20671 0.93641 0.99891 1.01860 1.19873 0.88827 0.99471 1.03151 1.18894 0.86262 0.94691 1.05833 1.46010 1.03680 1.09567 1.54977 1.19719 0.96587 0.72806 0.99021 1.21309 1.47053 0.98517 0.91266 0.91767 1.24934 0.94448 0.96064 0.98147 1.69916 1.44081 1.07553 1.31052 0.86373 0.78855 0.77983 0.83662 1.20170 1.20785 1.19613 0.90353 0.89098 0.89666 0.86317 0.86348 0.91662 0.91892 0.91976 0.86069 0.93058 0.93553 0.92146 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -1.25 9.95 36.00 0.36 -0.89 16 2 C 0.28 6.02 7.85 -154.81 -1.22 4.80 16 3 N -0.52 -11.42 11.27 -8.23 -0.09 -11.51 16 4 C 0.04 0.77 7.23 -84.70 -0.61 0.15 16 5 C -0.07 -1.31 10.05 -39.61 -0.40 -1.71 16 6 C -0.13 -2.13 9.61 -39.97 -0.38 -2.51 16 7 C -0.09 -1.57 5.88 -104.56 -0.62 -2.19 16 8 C -0.10 -1.32 10.00 36.01 0.36 -0.96 16 9 C -0.09 -1.84 9.69 -39.50 -0.38 -2.22 16 10 C 0.06 1.24 6.87 -83.99 -0.58 0.66 16 11 N -0.46 -10.51 2.79 -112.43 -0.31 -10.83 16 12 C 0.24 5.82 5.48 -5.19 -0.03 5.80 16 13 C -0.54 -14.41 9.39 -34.44 -0.32 -14.73 16 14 H 0.06 1.77 7.81 -52.49 -0.41 1.36 16 15 C 0.07 1.80 5.46 -17.82 -0.10 1.70 16 16 N -0.89 -24.22 13.29 55.43 0.74 -23.48 16 17 Si 0.90 20.54 29.54 -169.99 -5.02 15.52 16 18 H -0.28 -6.15 7.11 56.52 0.40 -5.75 16 19 H -0.28 -6.32 7.11 56.52 0.40 -5.92 16 20 H -0.27 -6.22 7.11 56.52 0.40 -5.82 16 21 H 0.08 1.14 8.14 -51.93 -0.42 0.72 16 22 H 0.09 1.60 7.68 -51.93 -0.40 1.20 16 23 H 0.08 1.25 8.14 -51.93 -0.42 0.83 16 24 H 0.12 1.84 8.06 -52.49 -0.42 1.42 16 25 H 0.12 1.47 8.06 -52.49 -0.42 1.04 16 26 H 0.06 0.77 8.14 -51.93 -0.42 0.35 16 27 H 0.06 0.77 8.08 -51.93 -0.42 0.35 16 28 H 0.06 0.66 8.08 -51.93 -0.42 0.24 16 29 H 0.12 2.39 8.06 -52.49 -0.42 1.97 16 30 H 0.05 1.26 7.65 -51.93 -0.40 0.86 16 31 H 0.05 1.19 8.14 -51.93 -0.42 0.77 16 32 H 0.27 6.92 8.31 -40.82 -0.34 6.58 16 LS Contribution 280.02 15.07 4.22 4.22 Total: -1.00 -29.44 280.02 -8.53 -37.97 By element: Atomic # 1 Polarization: 4.35 SS G_CDS: -4.14 Total: 0.21 kcal Atomic # 6 Polarization: -8.18 SS G_CDS: -3.92 Total: -12.10 kcal Atomic # 7 Polarization: -46.15 SS G_CDS: 0.33 Total: -45.82 kcal Atomic # 14 Polarization: 20.54 SS G_CDS: -5.02 Total: 15.52 kcal Total LS contribution 4.22 Total: 4.22 kcal Total: -29.44 -8.53 -37.97 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000095922508.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.423 kcal (2) G-P(sol) polarization free energy of solvation -29.445 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.978 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.527 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.972 kcal (6) G-S(sol) free energy of system = (1) + (5) 50.451 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds