Wall clock time and date at job start Mon Mar 30 2020 03:25:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 N 1.28260 * 122.72638 * 2 1 4 4 C 1.46972 * 110.19956 * 180.02562 * 3 2 1 5 5 C 1.54208 * 103.99298 * 359.92669 * 4 3 2 6 6 N 1.36449 * 122.71945 * 180.02562 * 2 1 3 7 7 C 1.39857 * 125.84650 * 359.96109 * 6 2 1 8 8 C 1.39304 * 119.94946 * 293.68834 * 7 6 2 9 9 C 1.38487 * 120.42638 * 179.72035 * 8 7 6 10 10 C 1.37693 * 120.32116 * 0.54854 * 9 8 7 11 11 C 1.40745 * 119.88957 * 359.72787 * 10 9 8 12 12 C 1.41403 * 120.21340 * 180.02562 * 11 10 9 13 13 H 1.07996 * 120.00776 * 155.24127 * 12 11 10 14 14 C 1.39938 * 119.99822 * 335.24788 * 12 11 10 15 15 N 1.30827 * 119.99858 * 344.47080 * 14 12 11 16 16 Si 1.86794 * 120.00121 * 164.46833 * 14 12 11 17 17 H 1.48500 * 109.47279 * 60.00055 * 16 14 12 18 18 H 1.48495 * 109.47265 * 180.02562 * 16 14 12 19 19 H 1.48501 * 109.47107 * 300.00054 * 16 14 12 20 20 C 1.38266 * 119.94678 * 113.95961 * 7 6 2 21 21 H 1.08997 * 109.46683 * 358.19981 * 1 2 3 22 22 H 1.09005 * 109.47076 * 118.19880 * 1 2 3 23 23 H 1.09001 * 109.47200 * 238.20140 * 1 2 3 24 24 H 1.08998 * 110.54728 * 118.59498 * 4 3 2 25 25 H 1.09002 * 110.54567 * 241.25750 * 4 3 2 26 26 H 1.08999 * 110.70143 * 118.46810 * 5 4 3 27 27 H 1.09008 * 110.69710 * 241.67886 * 5 4 3 28 28 H 1.07999 * 119.79341 * 359.97253 * 8 7 6 29 29 H 1.07995 * 119.84434 * 180.26019 * 9 8 7 30 30 H 1.07994 * 120.05681 * 179.74850 * 10 9 8 31 31 H 0.96998 * 120.00460 * 179.97438 * 15 14 12 32 32 H 1.08004 * 120.16019 * 359.97438 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2004 1.0790 0.0000 4 6 3.6351 0.7602 -0.0006 5 6 3.6746 -0.7814 0.0009 6 7 2.2445 -1.1480 -0.0005 7 6 1.7335 -2.4498 -0.0003 8 6 1.0286 -2.9201 1.1054 9 6 0.5132 -4.2055 1.1138 10 6 0.7020 -5.0371 0.0327 11 6 1.4170 -4.5778 -1.0891 12 6 1.6145 -5.4259 -2.2032 13 1 1.7869 -5.0016 -3.1812 14 6 1.5863 -6.8153 -2.0386 15 7 1.6831 -7.3342 -0.8415 16 14 1.4103 -7.9290 -3.5279 17 1 2.5484 -7.7005 -4.4541 18 1 1.4066 -9.3472 -3.0878 19 1 0.1353 -7.6245 -4.2257 20 6 1.9335 -3.2700 -1.0953 21 1 -0.3632 1.0272 0.0323 22 1 -0.3633 -0.4856 -0.9057 23 1 -0.3634 -0.5415 0.8734 24 1 4.1142 1.1543 -0.8968 25 1 4.1154 1.1562 0.8942 26 1 4.1697 -1.1550 -0.8954 27 1 4.1686 -1.1532 0.8986 28 1 0.8794 -2.2768 1.9599 29 1 -0.0354 -4.5589 1.9742 30 1 0.3017 -6.0401 0.0455 31 1 1.6632 -8.2972 -0.7272 32 1 2.4833 -2.9077 -1.9514 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260029273.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:25:41 Heat of formation + Delta-G solvation = 49.038145 kcal Electronic energy + Delta-G solvation = -15405.576890 eV Core-core repulsion = 12944.872572 eV Total energy + Delta-G solvation = -2460.704317 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 230.111 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -39.91159 -37.34965 -34.00168 -32.15598 -31.46033 -29.95685 -27.88870 -26.66545 -25.37798 -22.46051 -21.14509 -20.68941 -18.79433 -17.37461 -15.79337 -15.66891 -15.16533 -14.76260 -14.23835 -13.55046 -13.34713 -13.01388 -12.70986 -12.36812 -11.90188 -11.84925 -11.80770 -11.65639 -11.30948 -11.19748 -10.79675 -10.56783 -10.39376 -10.13352 -9.55286 -9.50209 -9.26068 -7.86154 -7.61187 -7.03698 -6.85050 -4.49365 2.59675 2.72121 2.98790 3.01380 3.03899 3.13680 3.65432 3.86335 4.48970 4.76143 5.00920 5.35399 5.49884 5.71804 5.80038 5.80574 5.87671 6.10532 6.15925 6.19286 6.30529 6.48241 6.72070 6.80042 6.90714 7.04786 7.16325 7.33171 7.69931 7.81825 7.92318 8.03000 8.36613 8.41713 8.56884 8.77764 8.84240 10.09074 Molecular weight = 230.11amu Principal moments of inertia in cm(-1) A = 0.040194 B = 0.006568 C = 0.006200 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 696.462037 B = 4262.348784 C = 4514.939731 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C 0.382 3.618 3 N -0.601 5.601 4 C 0.027 3.973 5 C 0.080 3.920 6 N -0.584 5.584 7 C 0.167 3.833 8 C -0.239 4.239 9 C -0.096 4.096 10 C -0.161 4.161 11 C 0.117 3.883 12 C -0.460 4.460 13 H 0.078 0.922 14 C 0.076 3.924 15 N -0.794 5.794 16 Si 0.911 3.089 17 H -0.265 1.265 18 H -0.278 1.278 19 H -0.263 1.263 20 C -0.222 4.222 21 H 0.082 0.918 22 H 0.082 0.918 23 H 0.083 0.917 24 H 0.076 0.924 25 H 0.076 0.924 26 H 0.070 0.930 27 H 0.069 0.931 28 H 0.089 0.911 29 H 0.093 0.907 30 H 0.123 0.877 31 H 0.282 0.718 32 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.405 5.184 0.840 5.267 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.107 3.893 3 N -0.332 5.332 4 C -0.103 4.103 5 C -0.044 4.044 6 N -0.300 5.300 7 C 0.077 3.923 8 C -0.260 4.260 9 C -0.115 4.115 10 C -0.180 4.180 11 C 0.114 3.886 12 C -0.490 4.490 13 H 0.096 0.904 14 C -0.142 4.142 15 N -0.419 5.419 16 Si 0.735 3.265 17 H -0.190 1.190 18 H -0.202 1.202 19 H -0.187 1.187 20 C -0.244 4.244 21 H 0.101 0.899 22 H 0.101 0.899 23 H 0.101 0.899 24 H 0.095 0.905 25 H 0.094 0.906 26 H 0.089 0.911 27 H 0.087 0.913 28 H 0.107 0.893 29 H 0.112 0.888 30 H 0.141 0.859 31 H 0.093 0.907 32 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -0.381 5.820 0.961 5.912 hybrid contribution 0.561 -1.489 -0.566 1.689 sum 0.180 4.332 0.394 4.353 Atomic orbital electron populations 1.20561 0.86963 1.03622 1.04054 1.23114 0.95419 0.82814 0.87991 1.74165 1.02160 1.24043 1.32789 1.22973 0.93200 0.92240 1.01843 1.22689 0.83282 0.96419 1.01964 1.45485 1.04648 1.03857 1.76058 1.17054 0.98870 0.81827 0.94573 1.20406 1.10887 0.97090 0.97643 1.20580 0.99752 0.93400 0.97805 1.21466 1.01880 1.00116 0.94570 1.17463 0.88033 0.90294 0.92807 1.19548 1.43352 0.90505 0.95586 0.90422 1.25910 0.92070 0.99132 0.97118 1.69790 1.34759 1.14007 1.23351 0.86320 0.80124 0.78403 0.81639 1.18985 1.20247 1.18735 1.21029 1.08951 0.96799 0.97592 0.89899 0.89928 0.89857 0.90535 0.90572 0.91123 0.91287 0.89292 0.88842 0.85880 0.90674 0.88868 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.42 9.63 36.01 0.35 -1.07 16 2 C 0.38 6.96 7.61 -155.94 -1.19 5.77 16 3 N -0.60 -10.91 11.58 -57.37 -0.66 -11.58 16 4 C 0.03 0.43 8.05 -3.15 -0.03 0.41 16 5 C 0.08 1.36 7.72 -2.79 -0.02 1.34 16 6 N -0.58 -11.42 3.04 -109.94 -0.33 -11.76 16 7 C 0.17 3.65 5.34 -83.79 -0.45 3.20 16 8 C -0.24 -5.14 9.19 -39.09 -0.36 -5.50 16 9 C -0.10 -2.14 10.02 -39.69 -0.40 -2.54 16 10 C -0.16 -3.98 8.69 -38.83 -0.34 -4.32 16 11 C 0.12 3.00 5.58 -106.85 -0.60 2.41 16 12 C -0.46 -11.80 9.06 -37.74 -0.34 -12.14 16 13 H 0.08 1.92 7.89 -52.49 -0.41 1.51 16 14 C 0.08 1.83 5.19 -17.34 -0.09 1.74 16 15 N -0.79 -19.77 10.83 55.55 0.60 -19.17 16 16 Si 0.91 18.07 29.59 -169.99 -5.03 13.04 16 17 H -0.27 -5.23 7.11 56.52 0.40 -4.83 16 18 H -0.28 -5.36 7.11 56.52 0.40 -4.96 16 19 H -0.26 -5.17 7.11 56.52 0.40 -4.77 16 20 C -0.22 -5.32 9.69 -38.68 -0.37 -5.69 16 21 H 0.08 1.09 8.14 -51.93 -0.42 0.66 16 22 H 0.08 1.25 8.14 -51.93 -0.42 0.82 16 23 H 0.08 1.22 7.61 -51.93 -0.39 0.83 16 24 H 0.08 1.10 8.14 -51.93 -0.42 0.68 16 25 H 0.08 1.08 8.14 -51.93 -0.42 0.66 16 26 H 0.07 1.17 8.14 -51.93 -0.42 0.75 16 27 H 0.07 1.12 8.14 -51.92 -0.42 0.70 16 28 H 0.09 1.77 8.04 -52.49 -0.42 1.35 16 29 H 0.09 1.84 8.06 -52.49 -0.42 1.41 16 30 H 0.12 3.14 6.08 -52.49 -0.32 2.82 16 31 H 0.28 6.41 8.30 -40.82 -0.34 6.07 16 32 H 0.09 2.20 8.06 -52.48 -0.42 1.77 16 LS Contribution 275.01 15.07 4.14 4.14 Total: -1.00 -27.05 275.01 -9.18 -36.23 By element: Atomic # 1 Polarization: 9.55 SS G_CDS: -4.07 Total: 5.48 kcal Atomic # 6 Polarization: -12.56 SS G_CDS: -3.83 Total: -16.39 kcal Atomic # 7 Polarization: -42.11 SS G_CDS: -0.40 Total: -42.51 kcal Atomic # 14 Polarization: 18.07 SS G_CDS: -5.03 Total: 13.04 kcal Total LS contribution 4.14 Total: 4.14 kcal Total: -27.05 -9.18 -36.23 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260029273.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.266 kcal (2) G-P(sol) polarization free energy of solvation -27.048 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.218 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.180 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.228 kcal (6) G-S(sol) free energy of system = (1) + (5) 49.038 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds