Wall clock time and date at job start Mon Mar 30 2020 03:25:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 N 1.30899 * 125.31576 * 2 1 4 4 C 1.33401 * 109.87054 * 180.30556 * 3 2 1 5 5 C 1.37997 * 107.45947 * 359.76286 * 4 3 2 6 6 C 1.40966 * 133.70966 * 179.97438 * 5 4 3 7 7 C 1.35882 * 119.17835 * 180.02562 * 6 5 4 8 8 C 1.50693 * 120.11762 * 180.02562 * 7 6 5 9 9 C 1.52997 * 109.47574 * 269.98387 * 8 7 6 10 10 C 1.50701 * 109.47571 * 179.97438 * 9 8 7 11 11 H 1.07997 * 119.99529 * 0.02562 * 10 9 8 12 12 C 1.37872 * 120.00024 * 179.97438 * 10 9 8 13 13 N 1.31510 * 119.99807 * 179.97438 * 12 10 9 14 14 Si 1.86803 * 120.00051 * 0.02562 * 12 10 9 15 15 H 1.48503 * 109.47400 * 89.99902 * 14 12 10 16 16 H 1.48505 * 109.46953 * 209.99674 * 14 12 10 17 17 H 1.48493 * 109.47269 * 329.99698 * 14 12 10 18 18 C 1.40813 * 119.76929 * 0.02562 * 7 6 5 19 19 C 1.34670 * 120.61930 * 359.97438 * 18 7 6 20 20 N 1.35036 * 125.31084 * 179.90400 * 2 1 3 21 21 H 1.09000 * 109.47191 * 270.09270 * 1 2 3 22 22 H 1.09003 * 109.46654 * 30.09152 * 1 2 3 23 23 H 1.09000 * 109.46893 * 150.08824 * 1 2 3 24 24 H 1.08003 * 126.26951 * 179.74391 * 4 3 2 25 25 H 1.07998 * 120.41568 * 0.02562 * 6 5 4 26 26 H 1.09002 * 109.47188 * 29.98321 * 8 7 6 27 27 H 1.08998 * 109.47255 * 149.97861 * 8 7 6 28 28 H 1.09002 * 109.46809 * 300.00167 * 9 8 7 29 29 H 1.09006 * 109.47004 * 59.99487 * 9 8 7 30 30 H 0.97007 * 120.00212 * 180.02562 * 13 12 10 31 31 H 1.08002 * 119.69063 * 179.97438 * 18 7 6 32 32 H 1.08003 * 119.72567 * 179.97438 * 19 18 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.2638 1.0681 0.0000 4 6 3.5496 0.7129 -0.0067 5 6 3.5981 -0.6663 -0.0057 6 6 4.6507 -1.6039 -0.0111 7 6 4.3562 -2.9304 -0.0086 8 6 5.4648 -3.9511 -0.0137 9 6 5.8324 -4.2979 -1.4578 10 6 6.9415 -5.3182 -1.4628 11 1 7.3437 -5.6830 -0.5293 12 6 7.4420 -5.7864 -2.6591 13 7 8.4102 -6.6764 -2.6634 14 14 6.7458 -5.1558 -4.2737 15 1 7.5095 -3.9585 -4.7081 16 1 6.8564 -6.2156 -5.3081 17 1 5.3181 -4.7918 -4.0886 18 6 3.0115 -3.3481 -0.0014 19 6 2.0127 -2.4447 0.0037 20 7 2.2876 -1.1019 0.0018 21 1 -0.3633 0.0017 1.0277 22 1 -0.3633 0.8892 -0.5153 23 1 -0.3633 -0.8908 -0.5125 24 1 4.3973 1.3820 -0.0122 25 1 5.6784 -1.2722 -0.0170 26 1 6.3377 -3.5420 0.4951 27 1 5.1322 -4.8515 0.5028 28 1 4.9595 -4.7070 -1.9666 29 1 6.1651 -3.3975 -1.9743 30 1 8.7626 -7.0057 -3.5051 31 1 2.7788 -4.4027 0.0001 32 1 0.9864 -2.7811 0.0088 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261027126.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:25:18 Heat of formation + Delta-G solvation = 67.699158 kcal Electronic energy + Delta-G solvation = -15040.643907 eV Core-core repulsion = 12580.748791 eV Total energy + Delta-G solvation = -2459.895115 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 230.111 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -42.66661 -37.79517 -34.52438 -33.06285 -31.95947 -30.41329 -29.84844 -26.86499 -24.86601 -23.43486 -21.79044 -20.90163 -20.16128 -17.31032 -16.95056 -16.25136 -15.93612 -15.19310 -14.60331 -14.29173 -13.84397 -13.25317 -13.23443 -13.01226 -12.75951 -12.57437 -12.02907 -11.91282 -11.64155 -11.34831 -11.00656 -10.59165 -10.23829 -10.03101 -9.83535 -9.69039 -9.27244 -9.05657 -8.59742 -7.20054 -6.10448 -4.09465 0.97682 1.40909 2.69586 3.09974 3.27042 3.34836 3.38262 3.60311 4.39973 4.41050 4.49824 4.76007 4.97195 5.02461 5.23730 5.28592 5.32386 5.36143 5.50297 5.71139 5.80362 5.99375 6.07652 6.18420 6.34624 6.57873 6.68029 6.69691 6.85902 7.18341 7.28786 7.32706 7.70921 7.98524 8.45707 8.93711 9.51748 11.02769 Molecular weight = 230.11amu Principal moments of inertia in cm(-1) A = 0.042178 B = 0.005571 C = 0.005521 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 663.696788 B = 5024.771796 C = 5070.646075 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 C 0.142 3.858 3 N -0.453 5.453 4 C -0.036 4.036 5 C 0.015 3.985 6 C -0.091 4.091 7 C -0.067 4.067 8 C -0.067 4.067 9 C -0.006 4.006 10 C -0.524 4.524 11 H 0.073 0.927 12 C 0.069 3.931 13 N -0.902 5.902 14 Si 0.878 3.122 15 H -0.276 1.276 16 H -0.287 1.287 17 H -0.266 1.266 18 C -0.112 4.112 19 C 0.032 3.968 20 N -0.363 5.363 21 H 0.075 0.925 22 H 0.088 0.912 23 H 0.069 0.931 24 H 0.178 0.822 25 H 0.146 0.854 26 H 0.070 0.930 27 H 0.069 0.931 28 H 0.016 0.984 29 H 0.013 0.987 30 H 0.264 0.736 31 H 0.149 0.851 32 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.349 9.800 5.423 18.203 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.112 4.112 3 N -0.168 5.168 4 C -0.190 4.190 5 C -0.094 4.094 6 C -0.110 4.110 7 C -0.070 4.070 8 C -0.105 4.105 9 C -0.043 4.043 10 C -0.562 4.562 11 H 0.092 0.908 12 C -0.133 4.133 13 N -0.540 5.540 14 Si 0.705 3.295 15 H -0.202 1.202 16 H -0.213 1.213 17 H -0.191 1.191 18 C -0.133 4.133 19 C -0.088 4.088 20 N -0.035 5.035 21 H 0.094 0.906 22 H 0.107 0.893 23 H 0.088 0.912 24 H 0.195 0.805 25 H 0.164 0.836 26 H 0.088 0.912 27 H 0.088 0.912 28 H 0.035 0.965 29 H 0.032 0.968 30 H 0.074 0.926 31 H 0.167 0.833 32 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -14.710 10.509 5.311 18.842 hybrid contribution 0.132 -0.662 -0.998 1.205 sum -14.578 9.847 4.313 18.113 Atomic orbital electron populations 1.20068 0.84866 1.03706 1.03068 1.23008 0.95444 0.79751 1.13016 1.69866 1.02671 1.27693 1.16590 1.22428 0.94386 0.90563 1.11616 1.19771 0.83912 0.95475 1.10213 1.20430 0.97804 0.91071 1.01719 1.20305 0.95125 0.94985 0.96561 1.20625 0.93910 0.95244 1.00676 1.19560 0.96948 0.96744 0.91058 1.21112 1.17646 1.22828 0.94573 0.90843 1.24998 0.94568 0.94575 0.99110 1.69907 1.26777 1.30472 1.26870 0.86812 0.80257 0.78745 0.83694 1.20191 1.21299 1.19098 1.20933 0.91876 1.00078 1.00428 1.21516 1.00947 0.80355 1.05946 1.42704 1.08129 1.06020 1.46608 0.90647 0.89346 0.91184 0.80476 0.83624 0.91168 0.91246 0.96524 0.96836 0.92643 0.83296 0.82220 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.54 10.33 36.01 0.37 -0.17 16 2 C 0.14 2.00 7.96 -155.08 -1.23 0.76 16 3 N -0.45 -7.20 11.19 -10.11 -0.11 -7.31 16 4 C -0.04 -0.54 12.02 -16.96 -0.20 -0.75 16 5 C 0.02 0.24 6.80 -84.09 -0.57 -0.33 16 6 C -0.09 -1.42 9.75 -39.39 -0.38 -1.81 16 7 C -0.07 -1.08 5.14 -104.50 -0.54 -1.62 16 8 C -0.07 -1.24 5.29 -27.89 -0.15 -1.39 16 9 C -0.01 -0.13 4.02 -27.88 -0.11 -0.24 16 10 C -0.52 -14.48 9.66 -34.44 -0.33 -14.81 16 11 H 0.07 2.17 7.99 -52.49 -0.42 1.75 16 12 C 0.07 1.98 5.47 -17.82 -0.10 1.88 16 13 N -0.90 -27.38 13.96 55.43 0.77 -26.60 16 14 Si 0.88 21.53 27.47 -169.99 -4.67 16.86 16 15 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 16 H -0.29 -6.97 7.11 56.52 0.40 -6.57 16 17 H -0.27 -6.32 6.54 56.52 0.37 -5.95 16 18 C -0.11 -1.55 9.66 -39.87 -0.39 -1.93 16 19 C 0.03 0.40 10.80 -16.48 -0.18 0.22 16 20 N -0.36 -5.32 2.94 -58.16 -0.17 -5.49 16 21 H 0.07 0.59 8.14 -51.93 -0.42 0.17 16 22 H 0.09 0.75 8.14 -51.93 -0.42 0.33 16 23 H 0.07 0.52 8.04 -51.93 -0.42 0.10 16 24 H 0.18 2.21 8.06 -52.48 -0.42 1.79 16 25 H 0.15 2.07 8.06 -52.49 -0.42 1.65 16 26 H 0.07 1.27 8.08 -51.93 -0.42 0.85 16 27 H 0.07 1.23 8.10 -51.93 -0.42 0.81 16 28 H 0.02 0.38 7.20 -51.93 -0.37 0.01 16 29 H 0.01 0.31 7.57 -51.93 -0.39 -0.08 16 30 H 0.26 7.50 8.31 -40.82 -0.34 7.16 16 31 H 0.15 1.74 8.06 -52.49 -0.42 1.32 16 32 H 0.16 1.37 7.98 -52.48 -0.42 0.95 16 LS Contribution 276.95 15.07 4.17 4.17 Total: -1.00 -32.58 276.95 -7.96 -40.54 By element: Atomic # 1 Polarization: 2.15 SS G_CDS: -4.14 Total: -2.00 kcal Atomic # 6 Polarization: -16.36 SS G_CDS: -3.81 Total: -20.17 kcal Atomic # 7 Polarization: -39.89 SS G_CDS: 0.49 Total: -39.41 kcal Atomic # 14 Polarization: 21.53 SS G_CDS: -4.67 Total: 16.86 kcal Total LS contribution 4.17 Total: 4.17 kcal Total: -32.58 -7.96 -40.54 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261027126.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 108.242 kcal (2) G-P(sol) polarization free energy of solvation -32.580 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.662 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.963 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.542 kcal (6) G-S(sol) free energy of system = (1) + (5) 67.699 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds