Wall clock time and date at job start Mon Mar 30 2020 03:25:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 N 1.30109 * 124.94988 * 2 1 4 4 C 1.35785 * 109.64196 * 180.02562 * 3 2 1 5 5 C 1.39746 * 133.60160 * 180.02562 * 4 3 2 6 6 C 1.36606 * 119.88512 * 180.23402 * 5 4 3 7 7 C 1.38776 * 120.66957 * 359.50085 * 6 5 4 8 8 C 1.37858 * 120.45004 * 0.46442 * 7 6 5 9 9 C 1.50697 * 120.15480 * 179.76997 * 8 7 6 10 10 C 1.52997 * 109.47121 * 265.02403 * 9 8 7 11 11 C 1.50697 * 109.47500 * 179.97438 * 10 9 8 12 12 H 1.07997 * 119.99713 * 359.97438 * 11 10 9 13 13 C 1.37878 * 120.00276 * 179.97438 * 11 10 9 14 14 N 1.31519 * 119.99750 * 179.97438 * 13 11 10 15 15 Si 1.86793 * 119.99979 * 359.97438 * 13 11 10 16 16 H 1.48500 * 109.47086 * 90.00028 * 15 13 11 17 17 H 1.48503 * 109.47354 * 210.00123 * 15 13 11 18 18 H 1.48500 * 109.47097 * 330.00204 * 15 13 11 19 19 C 1.38837 * 119.68906 * 359.78687 * 8 7 6 20 20 N 1.36037 * 124.94757 * 180.02562 * 2 1 3 21 21 H 0.97001 * 126.35332 * 359.95634 * 20 2 1 22 22 H 1.08993 * 109.47159 * 89.97058 * 1 2 3 23 23 H 1.09002 * 109.47006 * 209.97735 * 1 2 3 24 24 H 1.09006 * 109.46969 * 329.97751 * 1 2 3 25 25 H 1.08002 * 120.05286 * 359.94723 * 5 4 3 26 26 H 1.08003 * 119.66110 * 179.71724 * 6 5 4 27 27 H 1.08000 * 119.77565 * 180.25870 * 7 6 5 28 28 H 1.09003 * 109.46908 * 25.01708 * 9 8 7 29 29 H 1.08995 * 109.47511 * 145.02270 * 9 8 7 30 30 H 1.08999 * 109.47234 * 299.99892 * 10 9 8 31 31 H 1.09000 * 109.47460 * 59.99436 * 10 9 8 32 32 H 0.96998 * 119.99123 * 179.97438 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2523 1.0664 0.0000 4 6 3.5620 0.7080 -0.0006 5 6 4.7587 1.4296 -0.0004 6 6 5.9532 0.7668 -0.0060 7 6 5.9931 -0.6204 -0.0015 8 6 4.8252 -1.3529 -0.0009 9 6 4.8763 -2.8590 -0.0012 10 6 4.7677 -3.3726 -1.4383 11 6 4.8194 -4.8787 -1.4388 12 1 4.9201 -5.4158 -0.5073 13 6 4.7381 -5.5710 -2.6284 14 7 4.7837 -6.8854 -2.6288 15 14 4.5631 -4.6420 -4.2395 16 1 5.9105 -4.3474 -4.7899 17 1 3.8028 -5.4711 -5.2090 18 1 3.8369 -3.3689 -4.0005 19 6 3.6018 -0.6965 -0.0004 20 7 2.2862 -1.1151 -0.0005 21 1 1.9753 -2.0339 -0.0003 22 1 -0.3633 0.0005 -1.0276 23 1 -0.3633 -0.8902 0.5135 24 1 -0.3633 0.8898 0.5142 25 1 4.7392 2.5094 -0.0005 26 1 6.8759 1.3282 -0.0104 27 1 6.9455 -1.1295 -0.0018 28 1 5.8196 -3.1906 0.4327 29 1 4.0475 -3.2508 0.5883 30 1 3.8244 -3.0410 -1.8724 31 1 5.5965 -2.9808 -2.0279 32 1 4.7261 -7.3723 -3.4657 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261232885.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:25:57 Heat of formation + Delta-G solvation = 47.336468 kcal Electronic energy + Delta-G solvation = -15271.963322 eV Core-core repulsion = 12811.185215 eV Total energy + Delta-G solvation = -2460.778108 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 230.111 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -41.91626 -37.45131 -34.47485 -32.75944 -31.46747 -31.25406 -29.04181 -27.39315 -25.19794 -22.12402 -21.62179 -20.75551 -19.96328 -17.48077 -17.02838 -16.42906 -15.33017 -15.13626 -14.32705 -14.26933 -13.30532 -13.17639 -13.11202 -12.88954 -12.73905 -12.60619 -11.75225 -11.67541 -11.46086 -11.17662 -11.01544 -10.60214 -10.07238 -9.99167 -9.91493 -9.58432 -9.26570 -8.61965 -8.06085 -7.68202 -6.12792 -4.11865 1.22690 1.80882 2.96278 3.13025 3.25347 3.33056 3.37630 4.13964 4.24053 4.38130 4.81480 5.18165 5.20724 5.23302 5.33241 5.36302 5.55880 5.62952 5.73233 5.75806 6.01354 6.10679 6.29920 6.39216 6.66654 6.74678 6.78405 6.87486 7.15172 7.19357 7.31284 7.55525 7.69130 8.06370 8.43733 8.91234 9.49601 11.00289 Molecular weight = 230.11amu Principal moments of inertia in cm(-1) A = 0.025127 B = 0.007672 C = 0.006660 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1114.092726 B = 3648.656436 C = 4203.232967 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 C 0.274 3.726 3 N -0.501 5.501 4 C 0.046 3.954 5 C -0.087 4.087 6 C -0.120 4.120 7 C -0.115 4.115 8 C -0.052 4.052 9 C -0.070 4.070 10 C -0.004 4.004 11 C -0.524 4.524 12 H 0.073 0.927 13 C 0.069 3.931 14 N -0.901 5.901 15 Si 0.878 3.122 16 H -0.275 1.275 17 H -0.287 1.287 18 H -0.267 1.267 19 C 0.053 3.947 20 N -0.591 5.591 21 H 0.425 0.575 22 H 0.086 0.914 23 H 0.079 0.921 24 H 0.093 0.907 25 H 0.122 0.878 26 H 0.124 0.876 27 H 0.129 0.871 28 H 0.071 0.929 29 H 0.057 0.943 30 H 0.011 0.989 31 H 0.016 0.984 32 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.638 13.732 5.352 15.451 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C 0.007 3.993 3 N -0.223 5.223 4 C -0.072 4.072 5 C -0.107 4.107 6 C -0.141 4.141 7 C -0.135 4.135 8 C -0.055 4.055 9 C -0.107 4.107 10 C -0.041 4.041 11 C -0.562 4.562 12 H 0.091 0.909 13 C -0.132 4.132 14 N -0.540 5.540 15 Si 0.705 3.295 16 H -0.201 1.201 17 H -0.213 1.213 18 H -0.192 1.192 19 C -0.057 4.057 20 N -0.202 5.202 21 H 0.265 0.735 22 H 0.105 0.895 23 H 0.098 0.902 24 H 0.112 0.888 25 H 0.140 0.860 26 H 0.142 0.858 27 H 0.147 0.853 28 H 0.090 0.910 29 H 0.076 0.924 30 H 0.029 0.971 31 H 0.034 0.966 32 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -4.908 14.451 5.235 16.135 hybrid contribution 0.086 -0.997 -1.011 1.423 sum -4.822 13.454 4.223 14.903 Atomic orbital electron populations 1.20336 0.84511 1.04403 1.04120 1.23537 0.95574 0.81317 0.98855 1.70345 1.01027 1.27615 1.23309 1.19039 0.91903 0.90424 1.05884 1.19845 0.89267 0.99198 1.02379 1.20594 0.97166 0.94324 1.01979 1.20831 0.97218 0.93533 1.01911 1.19354 0.89322 0.97150 0.99645 1.20600 1.02224 0.87573 1.00352 1.19533 0.96428 0.96938 0.91250 1.21121 1.50798 0.89304 0.94994 0.90896 1.25003 0.94463 0.94707 0.99074 1.69912 1.50665 1.06224 1.27157 0.86811 0.78790 0.80196 0.83721 1.20084 1.21293 1.19184 1.18741 0.85215 0.94783 1.06943 1.43055 1.05054 1.09994 1.62133 0.73510 0.89520 0.90210 0.88827 0.85996 0.85756 0.85294 0.91009 0.92408 0.97099 0.96608 0.92639 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.68 10.51 36.00 0.38 -0.31 16 2 C 0.27 3.95 8.08 -154.83 -1.25 2.70 16 3 N -0.50 -8.54 11.27 -8.23 -0.09 -8.63 16 4 C 0.05 0.81 7.23 -84.70 -0.61 0.20 16 5 C -0.09 -1.34 10.05 -39.61 -0.40 -1.74 16 6 C -0.12 -1.71 9.96 -39.97 -0.40 -2.11 16 7 C -0.12 -1.83 9.67 -39.52 -0.38 -2.22 16 8 C -0.05 -0.94 5.14 -104.54 -0.54 -1.48 16 9 C -0.07 -1.37 5.29 -27.89 -0.15 -1.52 16 10 C 0.00 -0.10 4.02 -27.89 -0.11 -0.21 16 11 C -0.52 -14.65 9.66 -34.44 -0.33 -14.98 16 12 H 0.07 2.17 7.99 -52.49 -0.42 1.75 16 13 C 0.07 1.99 5.47 -17.82 -0.10 1.90 16 14 N -0.90 -27.42 13.96 55.43 0.77 -26.65 16 15 Si 0.88 21.79 27.47 -169.99 -4.67 17.12 16 16 H -0.28 -6.74 7.11 56.52 0.40 -6.34 16 17 H -0.29 -7.03 7.11 56.52 0.40 -6.62 16 18 H -0.27 -6.50 6.54 56.52 0.37 -6.13 16 19 C 0.05 0.95 7.00 -83.99 -0.59 0.36 16 20 N -0.59 -9.16 6.23 -8.00 -0.05 -9.21 16 21 H 0.43 5.82 8.96 -40.82 -0.37 5.45 16 22 H 0.09 0.70 8.14 -51.93 -0.42 0.28 16 23 H 0.08 0.56 8.14 -51.93 -0.42 0.14 16 24 H 0.09 0.75 8.14 -51.93 -0.42 0.33 16 25 H 0.12 1.61 8.06 -52.49 -0.42 1.19 16 26 H 0.12 1.36 8.06 -52.48 -0.42 0.94 16 27 H 0.13 1.83 8.06 -52.49 -0.42 1.41 16 28 H 0.07 1.37 8.05 -51.93 -0.42 0.95 16 29 H 0.06 1.10 8.12 -51.93 -0.42 0.68 16 30 H 0.01 0.26 7.20 -51.93 -0.37 -0.11 16 31 H 0.02 0.38 7.57 -51.93 -0.39 -0.02 16 32 H 0.26 7.52 8.31 -40.82 -0.34 7.18 16 LS Contribution 276.57 15.07 4.17 4.17 Total: -1.00 -33.09 276.57 -8.44 -41.53 By element: Atomic # 1 Polarization: 5.18 SS G_CDS: -4.10 Total: 1.08 kcal Atomic # 6 Polarization: -14.93 SS G_CDS: -4.48 Total: -19.41 kcal Atomic # 7 Polarization: -45.12 SS G_CDS: 0.63 Total: -44.49 kcal Atomic # 14 Polarization: 21.79 SS G_CDS: -4.67 Total: 17.12 kcal Total LS contribution 4.17 Total: 4.17 kcal Total: -33.09 -8.44 -41.53 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261232885.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.868 kcal (2) G-P(sol) polarization free energy of solvation -33.088 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.781 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.444 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.532 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.336 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds