Wall clock time and date at job start Mon Mar 30 2020 03:02:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13593 * 1 3 3 C 1.47207 * 179.97438 * 2 1 4 4 C 1.53000 * 109.47272 * 15.41549 * 3 2 1 5 5 C 1.53002 * 109.46693 * 180.02562 * 4 3 2 6 6 N 1.46499 * 109.46863 * 179.97438 * 5 4 3 7 7 C 1.39685 * 120.00341 * 180.02562 * 6 5 4 8 8 C 1.39337 * 119.94932 * 359.97438 * 7 6 5 9 9 C 1.38478 * 120.42823 * 180.02562 * 8 7 6 10 10 C 1.37688 * 120.32117 * 359.97438 * 9 8 7 11 11 C 1.40752 * 119.89434 * 0.03305 * 10 9 8 12 12 C 1.41411 * 120.20601 * 179.97438 * 11 10 9 13 13 H 1.07995 * 120.00317 * 24.35956 * 12 11 10 14 14 C 1.39935 * 119.99624 * 204.36087 * 12 11 10 15 15 N 1.30827 * 120.00201 * 17.84631 * 14 12 11 16 16 Si 1.86796 * 119.99610 * 197.84653 * 14 12 11 17 17 H 1.48501 * 109.47546 * 359.97438 * 16 14 12 18 18 H 1.48505 * 109.47184 * 119.99998 * 16 14 12 19 19 H 1.48498 * 109.47199 * 240.00043 * 16 14 12 20 20 C 1.38275 * 119.95691 * 179.97438 * 7 6 5 21 21 H 1.09004 * 109.46562 * 255.41388 * 3 2 1 22 22 H 1.09000 * 109.47002 * 135.42268 * 3 2 1 23 23 H 1.08993 * 109.47002 * 60.00161 * 4 3 2 24 24 H 1.08998 * 109.47097 * 299.99569 * 4 3 2 25 25 H 1.09002 * 109.47151 * 60.00453 * 5 4 3 26 26 H 1.09002 * 109.47344 * 299.99718 * 5 4 3 27 27 H 0.97003 * 120.00136 * 359.97438 * 6 5 4 28 28 H 1.07999 * 119.78413 * 0.02562 * 8 7 6 29 29 H 1.07997 * 119.84142 * 179.97438 * 9 8 7 30 30 H 1.07997 * 120.05363 * 179.97438 * 10 9 8 31 31 H 0.97003 * 119.99955 * 179.97438 * 15 14 12 32 32 H 1.08008 * 120.15896 * 359.70358 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1187 -1.3897 -0.3834 5 6 4.6487 -1.3890 -0.3828 6 7 5.1377 -2.7205 -0.7493 7 6 6.5111 -2.9662 -0.8160 8 6 7.4152 -1.9441 -0.5342 9 6 8.7788 -2.1766 -0.5978 10 6 9.2564 -3.4219 -0.9401 11 6 8.3553 -4.4641 -1.2276 12 6 8.8385 -5.7454 -1.5803 13 1 9.8236 -6.0566 -1.2655 14 6 8.0403 -6.6102 -2.3374 15 7 7.0212 -6.1397 -3.0094 16 14 8.4300 -8.4364 -2.3885 17 1 9.6243 -8.7114 -1.5500 18 1 7.2710 -9.2046 -1.8670 19 1 8.7047 -8.8449 -3.7894 20 6 6.9716 -4.2234 -1.1616 21 1 2.9711 0.2596 0.9946 22 1 2.9710 0.7328 -0.7213 23 1 2.7555 -1.6486 -1.3779 24 1 2.7557 -2.1218 0.3380 25 1 5.0115 -1.1303 0.6120 26 1 5.0121 -0.6569 -1.1039 27 1 4.5077 -3.4317 -0.9450 28 1 7.0500 -0.9642 -0.2644 29 1 9.4711 -1.3774 -0.3779 30 1 10.3207 -3.5983 -0.9888 31 1 6.4681 -6.7392 -3.5345 32 1 6.2718 -5.0178 -1.3756 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000313425140.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:02:50 Heat of formation + Delta-G solvation = 31.839731 kcal Electronic energy + Delta-G solvation = -14587.356795 eV Core-core repulsion = 12125.906699 eV Total energy + Delta-G solvation = -2461.450097 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 230.111 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -38.00543 -37.13591 -35.53840 -33.63824 -32.55723 -29.42817 -28.58592 -25.59277 -25.19560 -22.18935 -20.69346 -19.90929 -17.76970 -17.08434 -15.89978 -15.82295 -14.81169 -14.76219 -14.26502 -13.94943 -13.87185 -13.01043 -12.82393 -12.58154 -12.36086 -12.20486 -11.67542 -11.61191 -11.38679 -11.23166 -11.03207 -10.86668 -10.55191 -10.38189 -9.62497 -9.44411 -9.24338 -8.76436 -7.30746 -6.72771 -6.17626 -4.30584 2.56101 2.60980 2.86124 3.10863 3.16404 3.23193 3.33810 3.74094 3.98452 4.28965 4.72459 4.79330 5.03060 5.05379 5.36140 5.44604 5.70083 5.82595 6.11058 6.12678 6.27562 6.57864 6.88601 7.10781 7.14528 7.36890 7.38670 7.44156 7.80866 7.96341 8.10658 8.18137 8.49534 8.69201 8.84146 9.02012 9.12097 10.26005 Molecular weight = 230.11amu Principal moments of inertia in cm(-1) A = 0.031415 B = 0.005113 C = 0.004463 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 891.080129 B = 5474.520463 C = 6272.435915 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.445 5.445 2 C 0.210 3.790 3 C -0.023 4.023 4 C -0.128 4.128 5 C 0.138 3.862 6 N -0.763 5.763 7 C 0.214 3.786 8 C -0.299 4.299 9 C -0.067 4.067 10 C -0.257 4.257 11 C 0.138 3.862 12 C -0.465 4.465 13 H 0.076 0.924 14 C 0.078 3.922 15 N -0.793 5.793 16 Si 0.903 3.097 17 H -0.261 1.261 18 H -0.273 1.273 19 H -0.276 1.276 20 C -0.231 4.231 21 H 0.112 0.888 22 H 0.112 0.888 23 H 0.076 0.924 24 H 0.075 0.925 25 H 0.053 0.947 26 H 0.053 0.947 27 H 0.390 0.610 28 H 0.086 0.914 29 H 0.086 0.914 30 H 0.088 0.912 31 H 0.277 0.723 32 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.607 6.607 3.550 8.802 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.122 5.122 2 C -0.107 4.107 3 C -0.064 4.064 4 C -0.168 4.168 5 C 0.012 3.988 6 N -0.397 5.397 7 C 0.116 3.884 8 C -0.322 4.322 9 C -0.085 4.085 10 C -0.278 4.278 11 C 0.135 3.865 12 C -0.494 4.494 13 H 0.094 0.906 14 C -0.139 4.139 15 N -0.418 5.418 16 Si 0.728 3.272 17 H -0.184 1.184 18 H -0.199 1.199 19 H -0.201 1.201 20 C -0.255 4.255 21 H 0.130 0.870 22 H 0.130 0.870 23 H 0.094 0.906 24 H 0.093 0.907 25 H 0.071 0.929 26 H 0.071 0.929 27 H 0.223 0.777 28 H 0.105 0.895 29 H 0.104 0.896 30 H 0.106 0.894 31 H 0.087 0.913 32 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -6.483 6.740 3.437 9.964 hybrid contribution 0.312 -1.068 -0.256 1.142 sum -6.171 5.672 3.181 8.965 Atomic orbital electron populations 1.81225 1.13219 1.08651 1.09137 1.29288 0.95395 0.93087 0.92959 1.19238 0.81273 1.00188 1.05661 1.21727 0.96638 0.95144 1.03247 1.20987 0.90957 0.87066 0.99757 1.44366 1.04422 1.10680 1.80237 1.17630 0.81817 0.94225 0.94755 1.19877 0.92858 0.97416 1.22067 1.20289 0.94030 0.95809 0.98411 1.20872 0.97576 0.93761 1.15586 1.17327 0.90846 0.91821 0.86491 1.19593 1.01923 0.98464 1.29469 0.90550 1.25872 0.94045 1.00739 0.93276 1.69873 1.14593 1.36670 1.20678 0.86352 0.79606 0.82577 0.78680 1.18449 1.19852 1.20131 1.20725 0.96299 0.94647 1.13829 0.87028 0.87006 0.90576 0.90651 0.92895 0.92863 0.77676 0.89546 0.89625 0.89410 0.91257 0.86567 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.45 -5.89 18.54 42.15 0.78 -5.11 16 2 C 0.21 2.08 15.43 -20.76 -0.32 1.76 16 3 C -0.02 -0.15 5.70 -29.52 -0.17 -0.32 16 4 C -0.13 -1.15 5.28 -26.73 -0.14 -1.29 16 5 C 0.14 1.71 4.91 -4.04 -0.02 1.69 16 6 N -0.76 -13.28 5.73 -58.68 -0.34 -13.61 16 7 C 0.21 4.78 6.64 -83.86 -0.56 4.22 16 8 C -0.30 -6.49 9.32 -39.08 -0.36 -6.85 16 9 C -0.07 -1.49 10.02 -39.69 -0.40 -1.89 16 10 C -0.26 -6.39 9.79 -38.83 -0.38 -6.77 16 11 C 0.14 3.70 5.57 -106.85 -0.60 3.11 16 12 C -0.46 -12.42 9.05 -37.74 -0.34 -12.76 16 13 H 0.08 1.98 7.91 -52.49 -0.41 1.56 16 14 C 0.08 1.96 5.14 -17.34 -0.09 1.87 16 15 N -0.79 -20.43 10.95 55.55 0.61 -19.82 16 16 Si 0.90 18.70 29.59 -169.99 -5.03 13.67 16 17 H -0.26 -5.36 7.11 56.52 0.40 -4.96 16 18 H -0.27 -5.56 7.11 56.52 0.40 -5.16 16 19 H -0.28 -5.63 7.11 56.52 0.40 -5.22 16 20 C -0.23 -5.90 8.53 -38.68 -0.33 -6.23 16 21 H 0.11 0.51 8.14 -51.93 -0.42 0.08 16 22 H 0.11 0.52 8.14 -51.93 -0.42 0.10 16 23 H 0.08 0.72 8.14 -51.93 -0.42 0.30 16 24 H 0.07 0.69 8.14 -51.93 -0.42 0.27 16 25 H 0.05 0.64 7.94 -51.93 -0.41 0.23 16 26 H 0.05 0.66 7.94 -51.93 -0.41 0.25 16 27 H 0.39 6.48 8.48 -40.82 -0.35 6.13 16 28 H 0.09 1.63 6.70 -52.49 -0.35 1.28 16 29 H 0.09 1.67 8.06 -52.49 -0.42 1.24 16 30 H 0.09 2.07 8.06 -52.49 -0.42 1.65 16 31 H 0.28 6.48 8.30 -40.82 -0.34 6.15 16 32 H 0.12 3.07 6.16 -52.48 -0.32 2.74 16 LS Contribution 283.64 15.07 4.27 4.27 Total: -1.00 -30.08 283.64 -7.34 -37.42 By element: Atomic # 1 Polarization: 10.57 SS G_CDS: -3.93 Total: 6.63 kcal Atomic # 6 Polarization: -19.75 SS G_CDS: -3.70 Total: -23.45 kcal Atomic # 7 Polarization: -39.60 SS G_CDS: 1.05 Total: -38.55 kcal Atomic # 14 Polarization: 18.70 SS G_CDS: -5.03 Total: 13.67 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -30.08 -7.34 -37.42 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000313425140.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.262 kcal (2) G-P(sol) polarization free energy of solvation -30.083 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 39.179 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.340 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.422 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.840 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds