Wall clock time and date at job start Mon Mar 30 2020 03:05:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 N 1.46500 * 109.47249 * 2 1 4 4 C 1.46499 * 120.00503 * 89.99623 * 3 2 1 5 5 C 1.50698 * 109.47057 * 89.99800 * 4 3 2 6 6 H 1.08002 * 119.99852 * 0.02562 * 5 4 3 7 7 C 1.37876 * 120.00125 * 180.02562 * 5 4 3 8 8 N 1.31511 * 119.99801 * 0.02562 * 7 5 4 9 9 Si 1.86803 * 119.99949 * 180.02562 * 7 5 4 10 10 H 1.48496 * 109.47264 * 0.02562 * 9 7 5 11 11 H 1.48504 * 109.46917 * 119.99650 * 9 7 5 12 12 H 1.48499 * 109.47215 * 239.99525 * 9 7 5 13 13 C 1.39188 * 119.99523 * 269.99641 * 3 2 1 14 14 C 1.39183 * 119.92246 * 179.72402 * 13 3 2 15 15 C 1.37654 * 120.07451 * 179.72554 * 14 13 3 16 16 C 1.39808 * 119.92441 * 0.54747 * 15 14 13 17 17 C 1.43200 * 120.07551 * 179.70414 * 16 15 14 18 18 N 7.57080 * 102.27528 * 307.99792 * 2 1 3 19 19 C 1.39808 * 119.84739 * 359.72898 * 16 15 14 20 20 C 1.37654 * 119.92877 * 359.97438 * 19 16 15 21 21 H 1.09001 * 109.47002 * 60.00085 * 1 2 3 22 22 H 1.08993 * 109.46955 * 180.02562 * 1 2 3 23 23 H 1.09000 * 109.47050 * 300.00351 * 1 2 3 24 24 H 1.09001 * 109.46998 * 119.99358 * 2 1 3 25 25 H 1.09000 * 109.47050 * 239.99649 * 2 1 3 26 26 H 1.08995 * 109.47408 * 210.00417 * 4 3 2 27 27 H 1.09000 * 109.46694 * 330.00363 * 4 3 2 28 28 H 0.97000 * 119.99506 * 180.02562 * 8 7 5 29 29 H 1.07998 * 119.96227 * 359.97438 * 14 13 3 30 30 H 1.08000 * 120.03841 * 180.28364 * 15 14 13 31 31 H 1.07999 * 120.03614 * 179.97438 * 19 16 15 32 32 H 1.07994 * 119.96583 * 179.97438 * 20 19 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 2.2626 2.0719 1.2687 5 6 3.6858 1.8351 1.7038 6 1 4.3429 1.2309 1.0958 7 6 4.1491 2.3898 2.8779 8 7 3.3488 3.1251 3.6184 9 14 5.9135 2.0968 3.4169 10 1 6.6015 1.2425 2.4159 11 1 6.6205 3.3982 3.5255 12 1 5.9215 1.4174 4.7373 13 6 2.2505 2.0372 -1.2055 14 6 2.7089 3.3514 -1.2037 15 6 2.9448 4.0012 -2.3940 16 6 2.7125 3.3436 -3.6057 17 6 2.9507 4.0187 -4.8458 18 7 3.1397 4.5543 -5.8296 19 6 2.2464 2.0255 -3.6037 20 6 2.0184 1.3794 -2.4098 21 1 -0.3633 0.5138 -0.8900 22 1 -0.3633 -1.0276 0.0005 23 1 -0.3633 0.5139 0.8900 24 1 1.8934 -0.5137 0.8901 25 1 1.8934 -0.5139 -0.8900 26 1 2.0956 3.1411 1.1383 27 1 1.5817 1.6878 2.0283 28 1 3.6749 3.5156 4.4443 29 1 2.8837 3.8604 -0.2674 30 1 3.3050 5.0194 -2.3919 31 1 2.0655 1.5147 -4.5380 32 1 1.6580 0.3614 -2.4076 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000044413375.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:05:22 Heat of formation + Delta-G solvation = 51.547905 kcal Electronic energy + Delta-G solvation = -15134.202605 eV Core-core repulsion = 12673.607119 eV Total energy + Delta-G solvation = -2460.595486 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 230.111 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -39.30322 -36.80846 -35.42725 -32.99485 -31.33283 -30.47522 -29.22043 -26.66704 -23.63367 -23.35183 -21.58674 -20.35833 -18.38854 -16.74892 -16.29672 -15.56109 -14.57929 -14.39376 -14.01845 -13.57755 -13.51182 -13.28400 -13.09447 -12.72304 -12.35953 -12.14425 -11.95312 -11.74094 -11.40740 -11.31096 -11.04481 -10.84294 -10.69847 -10.39949 -10.02356 -9.89604 -9.05988 -8.63389 -8.59281 -6.72104 -6.16530 -4.28979 1.48130 1.87420 3.06270 3.19658 3.28707 3.32351 3.44556 3.84800 4.31067 4.41995 4.45377 5.11499 5.20313 5.25437 5.38225 5.60836 5.69855 5.74087 5.96906 5.99478 6.11084 6.21132 6.35503 6.47212 6.60497 6.75110 6.84335 6.97853 7.17652 7.25042 7.69325 7.91037 7.98473 8.04333 8.21712 8.79442 9.38798 10.84914 Molecular weight = 230.11amu Principal moments of inertia in cm(-1) A = 0.023068 B = 0.007424 C = 0.006088 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1213.499235 B = 3770.729712 C = 4598.232880 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C 0.114 3.886 3 N -0.594 5.594 4 C 0.243 3.757 5 C -0.535 4.535 6 H 0.062 0.938 7 C 0.064 3.936 8 N -0.893 5.893 9 Si 0.896 3.104 10 H -0.272 1.272 11 H -0.282 1.282 12 H -0.283 1.283 13 C 0.271 3.729 14 C -0.193 4.193 15 C -0.020 4.020 16 C -0.136 4.136 17 C 0.278 3.722 18 N -0.468 5.468 19 C -0.019 4.019 20 C -0.226 4.226 21 H 0.054 0.946 22 H 0.057 0.943 23 H 0.058 0.942 24 H 0.079 0.921 25 H 0.067 0.933 26 H 0.040 0.960 27 H 0.034 0.966 28 H 0.265 0.735 29 H 0.142 0.858 30 H 0.122 0.878 31 H 0.119 0.881 32 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.212 -4.572 -6.315 8.861 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C -0.010 4.010 3 N -0.294 5.294 4 C 0.124 3.876 5 C -0.574 4.574 6 H 0.080 0.920 7 C -0.139 4.139 8 N -0.531 5.531 9 Si 0.724 3.276 10 H -0.197 1.197 11 H -0.208 1.208 12 H -0.209 1.209 13 C 0.159 3.841 14 C -0.216 4.216 15 C -0.042 4.042 16 C -0.142 4.142 17 C -0.035 4.035 18 N -0.145 5.145 19 C -0.040 4.040 20 C -0.249 4.249 21 H 0.073 0.927 22 H 0.076 0.924 23 H 0.077 0.923 24 H 0.098 0.902 25 H 0.085 0.915 26 H 0.057 0.943 27 H 0.052 0.948 28 H 0.074 0.926 29 H 0.160 0.840 30 H 0.140 0.860 31 H 0.137 0.863 32 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges -3.976 -3.772 -7.389 9.200 hybrid contribution 0.936 -0.346 0.912 1.351 sum -3.040 -4.118 -6.478 8.256 Atomic orbital electron populations 1.22217 0.96870 1.01310 1.02409 1.21380 0.93387 0.83687 1.02542 1.47380 1.64768 1.12452 1.04836 1.19422 0.96536 0.93055 0.78578 1.21559 0.96793 1.32424 1.06625 0.92017 1.24948 0.97954 0.94787 0.96213 1.69928 1.35658 1.33211 1.14335 0.86460 0.84425 0.78195 0.78523 1.19663 1.20786 1.20918 1.18185 0.88492 0.91202 0.86263 1.20844 1.07521 0.94396 0.98818 1.20802 0.94402 0.98628 0.90326 1.15661 1.16811 0.95270 0.86507 1.25902 0.92135 0.92719 0.92753 1.81164 1.12134 1.09689 1.11541 1.20659 0.93899 0.91951 0.97514 1.20506 1.12618 1.01016 0.90770 0.92658 0.92361 0.92295 0.90239 0.91481 0.94254 0.94757 0.92560 0.83987 0.86016 0.86286 0.85758 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.18 10.24 37.16 0.38 -1.80 16 2 C 0.11 1.71 5.87 -4.04 -0.02 1.69 16 3 N -0.59 -10.93 2.58 -173.11 -0.45 -11.38 16 4 C 0.24 5.47 4.91 -5.20 -0.03 5.45 16 5 C -0.54 -13.46 9.39 -34.44 -0.32 -13.78 16 6 H 0.06 1.59 7.81 -52.49 -0.41 1.18 16 7 C 0.06 1.65 5.46 -17.82 -0.10 1.55 16 8 N -0.89 -24.20 13.29 55.43 0.74 -23.46 16 9 Si 0.90 20.25 29.54 -169.99 -5.02 15.23 16 10 H -0.27 -6.13 7.11 56.52 0.40 -5.73 16 11 H -0.28 -6.37 7.11 56.52 0.40 -5.97 16 12 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 13 C 0.27 4.67 6.55 -83.82 -0.55 4.12 16 14 C -0.19 -3.37 9.18 -39.44 -0.36 -3.73 16 15 C -0.02 -0.30 9.75 -39.21 -0.38 -0.69 16 16 C -0.14 -2.01 5.74 -106.80 -0.61 -2.62 16 17 C 0.28 4.34 15.33 -22.48 -0.34 4.00 16 18 N -0.47 -8.08 18.54 41.83 0.78 -7.30 16 19 C -0.02 -0.25 9.75 -39.21 -0.38 -0.64 16 20 C -0.23 -3.27 9.18 -39.45 -0.36 -3.64 16 21 H 0.05 0.70 8.14 -51.93 -0.42 0.27 16 22 H 0.06 0.61 8.14 -51.93 -0.42 0.19 16 23 H 0.06 0.83 8.14 -51.93 -0.42 0.41 16 24 H 0.08 1.26 8.07 -51.93 -0.42 0.84 16 25 H 0.07 0.88 6.17 -51.93 -0.32 0.56 16 26 H 0.04 0.93 6.16 -51.93 -0.32 0.61 16 27 H 0.03 0.82 8.07 -51.93 -0.42 0.40 16 28 H 0.26 6.83 8.31 -40.82 -0.34 6.49 16 29 H 0.14 2.73 6.11 -52.49 -0.32 2.41 16 30 H 0.12 1.65 8.06 -52.49 -0.42 1.22 16 31 H 0.12 1.33 8.06 -52.49 -0.42 0.91 16 32 H 0.12 1.56 6.11 -52.49 -0.32 1.24 16 LS Contribution 283.95 15.07 4.28 4.28 Total: -1.00 -27.09 283.95 -6.54 -33.63 By element: Atomic # 1 Polarization: 2.86 SS G_CDS: -3.78 Total: -0.92 kcal Atomic # 6 Polarization: -6.99 SS G_CDS: -3.08 Total: -10.08 kcal Atomic # 7 Polarization: -43.20 SS G_CDS: 1.07 Total: -42.14 kcal Atomic # 14 Polarization: 20.25 SS G_CDS: -5.02 Total: 15.23 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -27.09 -6.54 -33.63 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000044413375.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.174 kcal (2) G-P(sol) polarization free energy of solvation -27.086 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.088 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.540 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.626 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.548 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds