Wall clock time and date at job start Mon Mar 30 2020 03:07:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.47250 * 125.83986 * 2 1 4 4 C 1.54155 * 103.31605 * 180.26066 * 3 2 1 5 5 N 1.46933 * 104.09847 * 359.76582 * 4 3 2 6 6 C 1.29404 * 110.11986 * 359.97438 * 5 4 3 7 7 C 1.47669 * 122.92701 * 180.02562 * 6 5 4 8 8 C 1.39139 * 120.27117 * 303.77903 * 7 6 5 9 9 C 1.38178 * 120.10075 * 179.97438 * 8 7 6 10 10 C 1.38868 * 120.66989 * 359.97438 * 9 8 7 11 11 C 1.37515 * 120.55846 * 359.74241 * 10 9 8 12 12 C 1.40743 * 119.86863 * 0.51064 * 11 10 9 13 13 C 1.40899 * 120.32196 * 179.76454 * 12 11 10 14 14 H 1.08000 * 119.99549 * 154.90513 * 13 12 11 15 15 C 1.40189 * 120.00479 * 334.90933 * 13 12 11 16 16 N 1.30691 * 119.99675 * 342.21676 * 15 13 12 17 17 Si 1.86797 * 120.00145 * 162.21657 * 15 13 12 18 18 H 1.48508 * 109.46736 * 89.99946 * 17 15 13 19 19 H 1.48494 * 109.47138 * 209.99629 * 17 15 13 20 20 H 1.48492 * 109.47221 * 330.00186 * 17 15 13 21 21 H 1.09004 * 109.46495 * 274.81486 * 1 2 3 22 22 H 1.08999 * 109.47170 * 34.80610 * 1 2 3 23 23 H 1.08996 * 109.47140 * 154.81268 * 1 2 3 24 24 H 1.09000 * 110.85122 * 61.71040 * 3 2 1 25 25 H 1.09000 * 110.44853 * 298.61862 * 3 2 1 26 26 H 1.08997 * 110.50330 * 241.11702 * 4 3 2 27 27 H 1.08994 * 110.50643 * 118.41973 * 4 3 2 28 28 H 1.08001 * 119.95395 * 359.97438 * 8 7 6 29 29 H 1.07998 * 119.66801 * 179.97438 * 9 8 7 30 30 H 1.08004 * 119.72142 * 179.97438 * 10 9 8 31 31 H 1.08001 * 120.07035 * 180.28486 * 11 10 9 32 32 H 0.97003 * 119.99403 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.3272 1.1937 0.0000 4 6 3.7511 0.6032 -0.0068 5 7 3.5359 -0.8503 -0.0041 6 6 2.2687 -1.1126 0.0034 7 6 1.7339 -2.4890 0.0085 8 6 2.0971 -3.3863 -0.9911 9 6 1.5950 -4.6736 -0.9826 10 6 0.7261 -5.0885 0.0180 11 6 0.3536 -4.2261 1.0223 12 6 0.8469 -2.9080 1.0333 13 6 0.4676 -2.0150 2.0550 14 1 1.1094 -1.1855 2.3129 15 6 -0.7427 -2.2032 2.7369 16 7 -1.6710 -2.9655 2.2221 17 14 -1.0286 -1.3642 4.3812 18 1 -1.6486 -0.0335 4.1567 19 1 -1.9340 -2.1983 5.2117 20 1 0.2693 -1.1937 5.0822 21 1 -0.3632 0.0863 1.0241 22 1 -0.3633 0.8438 -0.5866 23 1 -0.3633 -0.9299 -0.4373 24 1 2.1630 1.7909 0.8970 25 1 2.1536 1.7888 -0.8965 26 1 4.2960 0.9101 0.8859 27 1 4.2866 0.9081 -0.9058 28 1 2.7724 -3.0761 -1.7748 29 1 1.8812 -5.3641 -1.7621 30 1 0.3425 -6.0981 0.0095 31 1 -0.3190 -4.5585 1.7992 32 1 -2.5087 -3.0954 2.6938 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000214981399.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:07:28 Heat of formation + Delta-G solvation = 52.082790 kcal Electronic energy + Delta-G solvation = -15998.004004 eV Core-core repulsion = 13537.431712 eV Total energy + Delta-G solvation = -2460.572292 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 230.111 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -39.26804 -37.16215 -33.87599 -32.18274 -30.95834 -29.59298 -27.87087 -25.86024 -25.07129 -21.68210 -21.51997 -20.74747 -18.19730 -17.24734 -15.87859 -15.46825 -15.13241 -14.38318 -13.98728 -13.51885 -13.29566 -12.77361 -12.67758 -12.14617 -11.75722 -11.61302 -11.44488 -11.32878 -11.18005 -11.12439 -10.81271 -10.54437 -10.15609 -9.60619 -9.52028 -9.27113 -8.95984 -7.51931 -7.47375 -7.00901 -6.89100 -4.48130 2.53449 2.79638 2.98671 3.03631 3.17296 3.64152 3.81641 3.98265 4.51793 5.17344 5.48535 5.51609 5.65877 5.77970 5.85736 6.11240 6.22157 6.32851 6.39817 6.42192 6.53800 6.70543 6.89543 6.92926 7.13808 7.23352 7.31275 7.47982 7.75102 7.91664 8.00522 8.14765 8.36341 8.52958 8.71766 8.83063 8.99755 10.00129 Molecular weight = 230.11amu Principal moments of inertia in cm(-1) A = 0.019172 B = 0.013585 C = 0.008933 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1460.135137 B = 2060.546748 C = 3133.524091 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.127 3.873 2 N -0.637 5.637 3 C 0.079 3.921 4 C 0.027 3.973 5 N -0.609 5.609 6 C 0.467 3.533 7 C -0.181 4.181 8 C -0.045 4.045 9 C -0.245 4.245 10 C -0.095 4.095 11 C -0.162 4.162 12 C 0.137 3.863 13 C -0.445 4.445 14 H 0.079 0.921 15 C 0.080 3.920 16 N -0.781 5.781 17 Si 0.901 3.099 18 H -0.269 1.269 19 H -0.274 1.274 20 H -0.260 1.260 21 H 0.057 0.943 22 H 0.039 0.961 23 H 0.077 0.923 24 H 0.060 0.940 25 H 0.059 0.941 26 H 0.069 0.931 27 H 0.068 0.932 28 H 0.093 0.907 29 H 0.091 0.909 30 H 0.090 0.910 31 H 0.120 0.880 32 H 0.283 0.717 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.114 4.598 -1.177 4.747 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.016 4.016 2 N -0.359 5.359 3 C -0.046 4.046 4 C -0.103 4.103 5 N -0.339 5.339 6 C 0.195 3.805 7 C -0.185 4.185 8 C -0.064 4.064 9 C -0.264 4.264 10 C -0.113 4.113 11 C -0.182 4.182 12 C 0.133 3.867 13 C -0.474 4.474 14 H 0.097 0.903 15 C -0.140 4.140 16 N -0.406 5.406 17 Si 0.725 3.275 18 H -0.194 1.194 19 H -0.199 1.199 20 H -0.184 1.184 21 H 0.075 0.925 22 H 0.058 0.942 23 H 0.095 0.905 24 H 0.078 0.922 25 H 0.077 0.923 26 H 0.088 0.912 27 H 0.086 0.914 28 H 0.111 0.889 29 H 0.109 0.891 30 H 0.108 0.892 31 H 0.138 0.862 32 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 0.413 4.245 -1.143 4.416 hybrid contribution -0.905 1.102 0.793 1.632 sum -0.491 5.347 -0.350 5.381 Atomic orbital electron populations 1.21352 0.77504 1.01341 1.01428 1.48145 1.05729 1.03817 1.78252 1.22448 0.92493 0.89237 1.00431 1.22918 0.94617 0.91788 1.01001 1.74724 1.13635 1.10510 1.35001 1.21331 0.86193 0.88144 0.84859 1.17874 1.10453 0.89362 1.00813 1.20489 0.96687 0.92981 0.96291 1.20284 1.07057 0.96415 1.02687 1.20769 0.97363 0.97821 0.95391 1.21261 1.03999 0.93042 0.99868 1.17437 0.87908 0.91908 0.89441 1.19521 1.03077 1.10523 1.14285 0.90286 1.25925 0.95355 0.94274 0.98415 1.69755 1.04587 1.29797 1.36418 0.86409 0.79456 0.79748 0.81861 1.19364 1.19885 1.18365 0.92462 0.94182 0.90462 0.92195 0.92305 0.91234 0.91398 0.88894 0.89104 0.89216 0.86194 0.90548 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.13 2.45 9.37 59.85 0.56 3.01 16 2 N -0.64 -13.10 3.13 -178.73 -0.56 -13.66 16 3 C 0.08 1.35 7.75 -3.03 -0.02 1.32 16 4 C 0.03 0.49 8.04 -3.20 -0.03 0.47 16 5 N -0.61 -13.96 11.63 -58.02 -0.67 -14.63 16 6 C 0.47 10.85 6.06 -155.68 -0.94 9.90 16 7 C -0.18 -4.45 5.08 -104.32 -0.53 -4.98 16 8 C -0.04 -1.04 9.77 -39.27 -0.38 -1.42 16 9 C -0.24 -5.44 10.03 -39.37 -0.39 -5.83 16 10 C -0.09 -2.15 10.01 -39.61 -0.40 -2.54 16 11 C -0.16 -4.02 8.68 -38.90 -0.34 -4.36 16 12 C 0.14 3.48 5.07 -106.56 -0.54 2.94 16 13 C -0.45 -11.01 5.69 -37.84 -0.22 -11.23 16 14 H 0.08 2.02 7.04 -52.49 -0.37 1.65 16 15 C 0.08 1.85 5.14 -17.31 -0.09 1.76 16 16 N -0.78 -18.40 10.99 55.56 0.61 -17.79 16 17 Si 0.90 17.76 29.60 -169.99 -5.03 12.73 16 18 H -0.27 -5.18 7.11 56.52 0.40 -4.78 16 19 H -0.27 -5.28 7.11 56.52 0.40 -4.88 16 20 H -0.26 -5.27 7.11 56.52 0.40 -4.87 16 21 H 0.06 1.15 7.01 -51.93 -0.36 0.79 16 22 H 0.04 0.64 8.14 -51.93 -0.42 0.22 16 23 H 0.08 1.65 7.18 -51.93 -0.37 1.27 16 24 H 0.06 0.95 8.14 -51.93 -0.42 0.52 16 25 H 0.06 0.88 8.14 -51.93 -0.42 0.46 16 26 H 0.07 1.18 8.14 -51.93 -0.42 0.76 16 27 H 0.07 1.11 8.14 -51.93 -0.42 0.69 16 28 H 0.09 2.04 8.06 -52.49 -0.42 1.62 16 29 H 0.09 1.78 8.06 -52.49 -0.42 1.36 16 30 H 0.09 1.80 8.06 -52.48 -0.42 1.37 16 31 H 0.12 3.02 6.20 -52.49 -0.33 2.69 16 32 H 0.28 6.09 8.29 -40.82 -0.34 5.76 16 LS Contribution 267.97 15.07 4.04 4.04 Total: -1.00 -26.77 267.97 -8.88 -35.66 By element: Atomic # 1 Polarization: 8.57 SS G_CDS: -3.95 Total: 4.63 kcal Atomic # 6 Polarization: -7.65 SS G_CDS: -3.32 Total: -10.97 kcal Atomic # 7 Polarization: -45.46 SS G_CDS: -0.62 Total: -46.08 kcal Atomic # 14 Polarization: 17.76 SS G_CDS: -5.03 Total: 12.73 kcal Total LS contribution 4.04 Total: 4.04 kcal Total: -26.77 -8.88 -35.66 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000214981399.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.740 kcal (2) G-P(sol) polarization free energy of solvation -26.772 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.968 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.885 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.657 kcal (6) G-S(sol) free energy of system = (1) + (5) 52.083 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds