Wall clock time and date at job start Mon Mar 30 2020 02:49:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 C 1.53004 * 109.47513 * 2 1 4 4 C 1.50697 * 109.47259 * 120.00081 * 2 1 3 5 5 N 1.30585 * 125.65507 * 307.90928 * 4 2 1 6 6 N 1.40052 * 109.58845 * 180.02562 * 5 4 2 7 7 H 0.97001 * 126.00769 * 179.75661 * 6 5 4 8 8 C 1.37172 * 107.98802 * 359.77934 * 6 5 4 9 9 C 1.39316 * 133.72281 * 179.97438 * 8 6 5 10 10 C 1.38155 * 120.98253 * 180.02562 * 9 8 6 11 11 C 1.37847 * 121.54811 * 359.97438 * 10 9 8 12 12 C 1.40661 * 120.15180 * 0.02562 * 11 10 9 13 13 C 1.40571 * 120.70074 * 180.02562 * 12 11 10 14 14 H 1.07997 * 119.99787 * 213.38866 * 13 12 11 15 15 C 1.40096 * 119.99754 * 33.39085 * 13 12 11 16 16 N 1.30769 * 120.00051 * 9.21043 * 15 13 12 17 17 Si 1.86800 * 119.99780 * 189.21289 * 15 13 12 18 18 H 1.48496 * 109.47207 * 359.97438 * 17 15 13 19 19 H 1.48502 * 109.47090 * 120.00220 * 17 15 13 20 20 H 1.48496 * 109.46970 * 239.99650 * 17 15 13 21 21 C 1.40552 * 125.65381 * 127.54186 * 4 2 1 22 22 H 1.09008 * 109.46956 * 300.00094 * 1 2 3 23 23 H 1.09002 * 109.47363 * 59.99485 * 1 2 3 24 24 H 1.08997 * 109.47482 * 180.02562 * 1 2 3 25 25 H 1.09000 * 109.47318 * 240.00445 * 2 1 3 26 26 H 1.09000 * 109.46501 * 300.00471 * 3 2 1 27 27 H 1.09008 * 109.46670 * 59.99646 * 3 2 1 28 28 H 1.08996 * 109.47728 * 179.97438 * 3 2 1 29 29 H 1.08000 * 119.50709 * 359.97438 * 9 8 6 30 30 H 1.08002 * 119.21953 * 179.97438 * 10 9 8 31 31 H 1.07999 * 119.92580 * 180.02562 * 11 10 9 32 32 H 0.97000 * 119.99942 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0323 -0.7104 1.2304 5 7 1.6714 -0.4529 2.4587 6 7 2.3450 -1.3121 3.3359 7 1 2.2573 -1.3242 4.3019 8 6 3.1510 -2.1332 2.5891 9 6 4.0342 -3.1630 2.9059 10 6 4.7303 -3.8321 1.9178 11 6 4.5802 -3.5104 0.5858 12 6 3.7031 -2.4798 0.2024 13 6 3.5406 -2.1426 -1.1526 14 1 3.3491 -1.1179 -1.4348 15 6 3.6272 -3.1358 -2.1368 16 7 3.6783 -4.3960 -1.7913 17 14 3.6697 -2.6599 -3.9427 18 1 3.5989 -1.1819 -4.0669 19 1 4.9318 -3.1487 -4.5538 20 1 2.5116 -3.2712 -4.6430 21 6 2.9615 -1.7648 1.2456 22 1 -0.3633 0.5139 0.8900 23 1 -0.3634 0.5139 -0.8899 24 1 -0.3634 -1.0276 0.0005 25 1 1.8933 -0.5138 -0.8900 26 1 1.6766 1.9563 -0.8900 27 1 1.6766 1.9563 0.8900 28 1 3.1300 1.4425 0.0005 29 1 4.1774 -3.4419 3.9394 30 1 5.4081 -4.6257 2.1955 31 1 5.1372 -4.0510 -0.1651 32 1 3.7386 -5.0837 -2.4728 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259984383.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:49:31 Heat of formation + Delta-G solvation = 58.851165 kcal Electronic energy + Delta-G solvation = -15842.811627 eV Core-core repulsion = 13382.532834 eV Total energy + Delta-G solvation = -2460.278793 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 230.111 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -39.99451 -35.82476 -35.01237 -33.32138 -30.38174 -28.72302 -27.99835 -26.58971 -25.18208 -22.53826 -21.16689 -20.48053 -18.20135 -17.72718 -15.96793 -15.39580 -14.89354 -14.00304 -13.76083 -13.64723 -13.54091 -12.92876 -12.56180 -12.38349 -11.69791 -11.65365 -11.40421 -11.26840 -10.85243 -10.66283 -10.56990 -10.25324 -10.20518 -9.99148 -9.64026 -9.42185 -9.18116 -8.59185 -7.25524 -6.89081 -6.74714 -4.48096 2.28824 2.90605 3.00654 3.05471 3.24404 3.73834 3.80884 3.86100 4.54600 5.38613 5.52318 5.56618 5.82297 6.03891 6.12067 6.16880 6.19206 6.34527 6.46748 6.49144 6.60047 6.72006 6.80596 6.87265 6.98885 7.02782 7.20006 7.47359 7.75556 7.84575 7.97485 8.11746 8.43246 8.59980 8.66738 8.76808 8.94348 10.02958 Molecular weight = 230.11amu Principal moments of inertia in cm(-1) A = 0.020351 B = 0.012499 C = 0.008326 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1375.532181 B = 2239.574924 C = 3362.275954 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C -0.029 4.029 3 C -0.137 4.137 4 C 0.131 3.869 5 N -0.320 5.320 6 N -0.533 5.533 7 H 0.423 0.577 8 C 0.161 3.839 9 C -0.292 4.292 10 C -0.036 4.036 11 C -0.224 4.224 12 C 0.182 3.818 13 C -0.441 4.441 14 H 0.090 0.910 15 C 0.074 3.926 16 N -0.778 5.778 17 Si 0.911 3.089 18 H -0.256 1.256 19 H -0.270 1.270 20 H -0.272 1.272 21 C -0.252 4.252 22 H 0.053 0.947 23 H 0.052 0.948 24 H 0.053 0.947 25 H 0.109 0.891 26 H 0.053 0.947 27 H 0.052 0.948 28 H 0.054 0.946 29 H 0.086 0.914 30 H 0.092 0.908 31 H 0.116 0.884 32 H 0.284 0.716 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.375 3.930 -0.446 4.187 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 C -0.049 4.049 3 C -0.195 4.195 4 C -0.041 4.041 5 N -0.138 5.138 6 N -0.246 5.246 7 H 0.265 0.735 8 C 0.045 3.955 9 C -0.317 4.317 10 C -0.057 4.057 11 C -0.245 4.245 12 C 0.177 3.823 13 C -0.470 4.470 14 H 0.108 0.892 15 C -0.146 4.146 16 N -0.401 5.401 17 Si 0.734 3.266 18 H -0.180 1.180 19 H -0.195 1.195 20 H -0.197 1.197 21 C -0.260 4.260 22 H 0.073 0.927 23 H 0.071 0.929 24 H 0.072 0.928 25 H 0.127 0.873 26 H 0.072 0.928 27 H 0.071 0.929 28 H 0.073 0.927 29 H 0.105 0.895 30 H 0.110 0.890 31 H 0.134 0.866 32 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -2.122 4.435 0.214 4.922 hybrid contribution 0.498 -0.675 -0.515 0.984 sum -1.624 3.761 -0.301 4.107 Atomic orbital electron populations 1.21757 0.95024 1.01674 1.01028 1.19887 0.95176 0.95064 0.94792 1.21764 1.01238 0.95431 1.01069 1.21711 0.95050 0.94720 0.92621 1.76520 1.20919 1.16332 1.00012 1.45732 1.39598 1.31887 1.07337 0.73508 1.18690 0.92867 0.92824 0.91132 1.19087 1.09784 1.05234 0.97552 1.20384 0.95968 0.95965 0.93335 1.20922 1.04771 1.04804 0.93979 1.18072 0.85417 0.88066 0.90793 1.19665 1.40742 0.95886 0.90707 0.89172 1.26022 0.92213 0.94417 1.01985 1.69804 1.33028 1.00782 1.36523 0.86202 0.78827 0.80489 0.81053 1.17958 1.19535 1.19690 1.19777 1.07458 1.05660 0.93148 0.92745 0.92937 0.92823 0.87286 0.92780 0.92900 0.92671 0.89539 0.88981 0.86575 0.90521 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.32 9.12 37.15 0.34 -1.98 16 2 C -0.03 -0.56 3.20 -91.78 -0.29 -0.85 16 3 C -0.14 -2.28 9.18 37.16 0.34 -1.94 16 4 C 0.13 2.98 5.77 -82.25 -0.47 2.51 16 5 N -0.32 -7.15 12.52 33.77 0.42 -6.73 16 6 N -0.53 -11.45 7.45 32.34 0.24 -11.21 16 7 H 0.42 7.48 8.96 -182.63 -1.64 5.84 16 8 C 0.16 3.86 7.33 -84.19 -0.62 3.24 16 9 C -0.29 -6.72 10.03 -39.21 -0.39 -7.11 16 10 C -0.04 -0.83 9.94 -39.75 -0.40 -1.22 16 11 C -0.22 -5.68 8.64 -38.81 -0.34 -6.01 16 12 C 0.18 4.72 5.65 -104.73 -0.59 4.13 16 13 C -0.44 -10.87 7.98 -38.01 -0.30 -11.17 16 14 H 0.09 2.10 5.82 -52.49 -0.31 1.79 16 15 C 0.07 1.73 5.26 -17.31 -0.09 1.64 16 16 N -0.78 -19.00 11.10 55.56 0.62 -18.38 16 17 Si 0.91 17.36 29.57 -169.99 -5.03 12.33 16 18 H -0.26 -4.77 7.11 56.52 0.40 -4.37 16 19 H -0.27 -5.09 7.11 56.52 0.40 -4.69 16 20 H -0.27 -5.14 7.11 56.52 0.40 -4.73 16 21 C -0.25 -6.36 6.19 -104.76 -0.65 -7.01 16 22 H 0.05 0.91 8.14 -51.92 -0.42 0.48 16 23 H 0.05 0.74 8.14 -51.93 -0.42 0.32 16 24 H 0.05 0.95 8.14 -51.93 -0.42 0.53 16 25 H 0.11 2.22 4.79 -51.93 -0.25 1.97 16 26 H 0.05 0.75 8.14 -51.93 -0.42 0.33 16 27 H 0.05 0.86 8.14 -51.92 -0.42 0.44 16 28 H 0.05 0.95 8.14 -51.93 -0.42 0.53 16 29 H 0.09 1.76 8.06 -52.49 -0.42 1.34 16 30 H 0.09 1.87 8.06 -52.49 -0.42 1.44 16 31 H 0.12 2.99 6.55 -52.49 -0.34 2.64 16 32 H 0.28 6.26 8.29 -40.82 -0.34 5.92 16 LS Contribution 269.63 15.07 4.06 4.06 Total: -1.00 -27.72 269.63 -8.20 -35.92 By element: Atomic # 1 Polarization: 14.83 SS G_CDS: -5.05 Total: 9.78 kcal Atomic # 6 Polarization: -22.31 SS G_CDS: -3.46 Total: -25.78 kcal Atomic # 7 Polarization: -37.60 SS G_CDS: 1.28 Total: -36.32 kcal Atomic # 14 Polarization: 17.36 SS G_CDS: -5.03 Total: 12.33 kcal Total LS contribution 4.06 Total: 4.06 kcal Total: -27.72 -8.20 -35.92 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259984383.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 94.770 kcal (2) G-P(sol) polarization free energy of solvation -27.720 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.049 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.198 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.918 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.851 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds