Wall clock time and date at job start Mon Mar 30 2020 02:49:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53006 * 109.47218 * 2 1 4 4 C 1.50702 * 109.47434 * 119.99922 * 2 1 3 5 5 N 1.34539 * 126.52155 * 300.02767 * 4 2 1 6 6 H 0.97000 * 123.98435 * 0.23129 * 5 4 2 7 7 N 1.28480 * 112.03691 * 179.97438 * 5 4 2 8 8 C 1.32414 * 110.68927 * 0.02562 * 7 5 4 9 9 C 1.40091 * 135.16293 * 179.97438 * 8 7 5 10 10 C 1.39798 * 119.86478 * 179.97438 * 9 8 7 11 11 C 1.40967 * 119.41583 * 180.02562 * 10 9 8 12 12 H 1.07994 * 120.00062 * 334.69454 * 11 10 9 13 13 C 1.39858 * 119.99517 * 154.70234 * 11 10 9 14 14 N 1.30888 * 120.00120 * 341.95210 * 13 11 10 15 15 Si 1.86800 * 120.00097 * 161.95475 * 13 11 10 16 16 H 1.48506 * 109.47071 * 94.62343 * 15 13 11 17 17 H 1.48496 * 109.47280 * 214.62401 * 15 13 11 18 18 H 1.48497 * 109.46816 * 334.62942 * 15 13 11 19 19 C 1.45984 * 121.15649 * 359.97438 * 10 9 8 20 20 C 1.35181 * 120.80486 * 0.02562 * 19 10 9 21 21 C 1.37825 * 126.52396 * 119.98196 * 4 2 1 22 22 H 1.09005 * 109.46779 * 299.99893 * 1 2 3 23 23 H 1.08996 * 109.47000 * 59.99748 * 1 2 3 24 24 H 1.08996 * 109.46821 * 179.97438 * 1 2 3 25 25 H 1.08998 * 109.47314 * 240.00521 * 2 1 3 26 26 H 1.08997 * 109.47185 * 179.97438 * 3 2 1 27 27 H 1.09005 * 109.47019 * 300.00562 * 3 2 1 28 28 H 1.09007 * 109.46964 * 59.99585 * 3 2 1 29 29 H 1.08000 * 120.06365 * 359.97438 * 9 8 7 30 30 H 0.96999 * 120.00100 * 179.97438 * 14 13 11 31 31 H 1.08002 * 119.59946 * 179.97438 * 19 10 9 32 32 H 1.07999 * 120.27748 * 180.02562 * 20 19 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0324 -0.7104 1.2305 5 7 1.7893 -0.3673 2.5084 6 1 1.2473 0.3927 2.7721 7 7 2.3552 -1.1682 3.3386 8 6 3.0241 -2.1127 2.6954 9 6 3.8029 -3.2132 3.0763 10 6 4.3802 -4.0291 2.0989 11 6 5.1616 -5.1343 2.4928 12 1 5.6508 -5.1340 3.4556 13 6 5.3035 -6.2310 1.6365 14 7 4.4597 -6.4055 0.6513 15 14 6.6972 -7.4467 1.8990 16 1 6.2115 -8.5878 2.7161 17 1 7.1724 -7.9465 0.5839 18 1 7.8156 -6.7725 2.6060 19 6 4.1870 -3.7574 0.6776 20 6 3.4426 -2.7056 0.2688 21 6 2.8277 -1.8356 1.2607 22 1 -0.3633 0.5138 0.8900 23 1 -0.3633 0.5139 -0.8899 24 1 -0.3633 -1.0276 -0.0005 25 1 1.8934 -0.5137 -0.8900 26 1 3.1300 1.4425 0.0005 27 1 1.6766 1.9564 -0.8900 28 1 1.6766 1.9564 0.8900 29 1 3.9569 -3.4307 4.1229 30 1 4.5583 -7.1660 0.0573 31 1 4.6450 -4.4040 -0.0562 32 1 3.3050 -2.5127 -0.7848 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260729812.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:49:55 Heat of formation + Delta-G solvation = 63.176648 kcal Electronic energy + Delta-G solvation = -15355.981510 eV Core-core repulsion = 12895.890284 eV Total energy + Delta-G solvation = -2460.091226 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 230.111 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.10896 -36.06541 -35.24161 -33.22377 -30.15379 -29.57384 -27.72978 -27.09446 -25.63647 -22.40307 -21.36272 -20.81655 -18.43366 -17.45365 -16.38153 -15.46295 -15.23270 -14.62768 -14.43787 -13.88999 -13.20533 -12.92250 -12.89406 -12.39710 -12.19771 -11.92922 -11.40592 -11.12733 -11.11270 -10.95240 -10.82428 -10.52322 -10.38158 -10.07942 -9.80746 -9.18879 -8.81411 -8.69530 -7.31681 -6.93589 -6.45538 -4.32681 2.12793 2.88468 3.05569 3.11553 3.34548 3.82789 3.88599 3.93236 4.56402 4.92929 5.01850 5.28243 5.59714 5.60669 5.65394 5.78593 5.81687 5.88545 6.04684 6.19450 6.24271 6.32691 6.66932 6.78592 6.92056 7.02644 7.13796 7.58870 7.74205 7.92306 7.99997 8.19668 8.27230 8.49292 8.85653 8.94365 9.38116 10.08888 Molecular weight = 230.11amu Principal moments of inertia in cm(-1) A = 0.048357 B = 0.006381 C = 0.005934 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 578.890049 B = 4386.990218 C = 4717.147103 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.018 4.018 3 C -0.145 4.145 4 C 0.014 3.986 5 N -0.387 5.387 6 H 0.424 0.576 7 N -0.376 5.376 8 C 0.134 3.866 9 C -0.291 4.291 10 C 0.133 3.867 11 C -0.445 4.445 12 H 0.083 0.917 13 C 0.075 3.925 14 N -0.791 5.791 15 Si 0.911 3.089 16 H -0.269 1.269 17 H -0.275 1.275 18 H -0.259 1.259 19 C -0.087 4.087 20 C -0.107 4.107 21 C -0.199 4.199 22 H 0.048 0.952 23 H 0.058 0.942 24 H 0.060 0.940 25 H 0.090 0.910 26 H 0.059 0.941 27 H 0.058 0.942 28 H 0.048 0.952 29 H 0.093 0.907 30 H 0.283 0.717 31 H 0.125 0.875 32 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.418 7.696 -4.612 9.601 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.039 4.039 3 C -0.202 4.202 4 C -0.118 4.118 5 N -0.090 5.090 6 H 0.264 0.736 7 N -0.210 5.210 8 C -0.012 4.012 9 C -0.316 4.316 10 C 0.127 3.873 11 C -0.476 4.476 12 H 0.101 0.899 13 C -0.144 4.144 14 N -0.416 5.416 15 Si 0.735 3.265 16 H -0.194 1.194 17 H -0.200 1.200 18 H -0.182 1.182 19 C -0.106 4.106 20 C -0.127 4.127 21 C -0.209 4.209 22 H 0.067 0.933 23 H 0.077 0.923 24 H 0.079 0.921 25 H 0.108 0.892 26 H 0.078 0.922 27 H 0.077 0.923 28 H 0.067 0.933 29 H 0.111 0.889 30 H 0.094 0.906 31 H 0.142 0.858 32 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -3.759 7.927 -3.664 9.508 hybrid contribution 0.394 -0.527 -0.573 0.872 sum -3.365 7.400 -4.237 9.167 Atomic orbital electron populations 1.21861 0.94857 1.02284 1.01272 1.19575 0.95055 0.94989 0.94253 1.21862 1.01751 0.95334 1.01285 1.20779 1.04901 0.99297 0.86847 1.42687 1.39504 1.23989 1.02790 0.73572 1.73563 1.20844 1.07678 1.18885 1.20453 0.96670 0.94329 0.89756 1.19371 1.13069 1.01808 0.97366 1.18228 0.88043 0.91038 0.89970 1.19593 1.25584 0.99596 1.02783 0.89859 1.26004 0.95818 0.98804 0.93725 1.69852 1.31012 1.27052 1.13714 0.86252 0.81514 0.79954 0.78802 1.19436 1.19962 1.18246 1.22216 0.97417 0.94405 0.96568 1.20714 1.00746 0.96017 0.95254 1.20146 1.06781 0.98612 0.95398 0.93254 0.92310 0.92126 0.89197 0.92179 0.92313 0.93256 0.88854 0.90611 0.85762 0.88488 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.73 9.18 37.16 0.34 -1.38 16 2 C -0.02 -0.26 3.34 -91.77 -0.31 -0.57 16 3 C -0.14 -1.69 9.18 37.16 0.34 -1.35 16 4 C 0.01 0.27 5.82 -81.56 -0.47 -0.20 16 5 N -0.39 -7.35 6.69 33.86 0.23 -7.13 16 6 H 0.42 6.24 8.96 -190.43 -1.71 4.53 16 7 N -0.38 -8.89 12.23 33.17 0.41 -8.48 16 8 C 0.13 3.48 7.50 -83.18 -0.62 2.85 16 9 C -0.29 -7.93 9.80 -38.30 -0.38 -8.31 16 10 C 0.13 3.62 5.68 -105.18 -0.60 3.03 16 11 C -0.45 -11.74 8.98 -37.94 -0.34 -12.08 16 12 H 0.08 2.13 7.91 -52.49 -0.42 1.71 16 13 C 0.08 1.83 5.12 -17.35 -0.09 1.74 16 14 N -0.79 -19.70 10.94 55.54 0.61 -19.09 16 15 Si 0.91 18.11 29.60 -169.99 -5.03 13.08 16 16 H -0.27 -5.31 7.11 56.52 0.40 -4.91 16 17 H -0.27 -5.29 7.11 56.52 0.40 -4.89 16 18 H -0.26 -5.13 7.11 56.52 0.40 -4.73 16 19 C -0.09 -2.19 8.70 -37.57 -0.33 -2.52 16 20 C -0.11 -2.48 10.26 -37.75 -0.39 -2.87 16 21 C -0.20 -4.68 6.52 -103.39 -0.67 -5.36 16 22 H 0.05 0.54 8.14 -51.93 -0.42 0.12 16 23 H 0.06 0.57 8.14 -51.93 -0.42 0.14 16 24 H 0.06 0.80 8.14 -51.93 -0.42 0.38 16 25 H 0.09 1.27 8.12 -51.93 -0.42 0.85 16 26 H 0.06 0.76 8.14 -51.93 -0.42 0.34 16 27 H 0.06 0.55 8.14 -51.93 -0.42 0.13 16 28 H 0.05 0.53 8.14 -51.93 -0.42 0.11 16 29 H 0.09 2.52 8.06 -52.49 -0.42 2.09 16 30 H 0.28 6.35 8.30 -40.82 -0.34 6.01 16 31 H 0.12 3.12 6.22 -52.49 -0.33 2.79 16 32 H 0.10 1.93 8.06 -52.49 -0.42 1.51 16 LS Contribution 275.31 15.07 4.15 4.15 Total: -1.00 -29.76 275.31 -8.54 -38.30 By element: Atomic # 1 Polarization: 11.57 SS G_CDS: -5.39 Total: 6.19 kcal Atomic # 6 Polarization: -23.50 SS G_CDS: -3.51 Total: -27.02 kcal Atomic # 7 Polarization: -35.94 SS G_CDS: 1.24 Total: -34.70 kcal Atomic # 14 Polarization: 18.11 SS G_CDS: -5.03 Total: 13.08 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -29.76 -8.54 -38.30 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260729812.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 101.481 kcal (2) G-P(sol) polarization free energy of solvation -29.761 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.719 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.543 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.304 kcal (6) G-S(sol) free energy of system = (1) + (5) 63.177 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds