Wall clock time and date at job start Mon Mar 30 2020 03:16:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46895 * 1 3 3 C 1.48562 * 110.99842 * 2 1 4 4 C 1.54379 * 104.59486 * 200.96032 * 3 2 1 5 5 C 1.54266 * 105.05973 * 23.85004 * 4 3 2 6 6 H 1.09003 * 110.32265 * 241.10234 * 5 4 3 7 7 C 1.50699 * 110.32266 * 118.89787 * 5 4 3 8 8 C 1.38967 * 120.70536 * 300.00204 * 7 5 4 9 9 C 1.38760 * 119.55782 * 180.02562 * 8 7 5 10 10 N 1.31428 * 121.00965 * 0.02562 * 9 8 7 11 11 C 1.33603 * 121.51650 * 359.97438 * 10 9 8 12 12 C 1.41404 * 119.82592 * 179.97438 * 11 10 9 13 13 H 1.07999 * 119.99880 * 179.97438 * 12 11 10 14 14 C 1.40038 * 119.99925 * 359.97438 * 12 11 10 15 15 N 1.30737 * 120.00201 * 0.02562 * 14 12 11 16 16 Si 1.86803 * 119.99710 * 180.02562 * 14 12 11 17 17 H 1.48495 * 109.46912 * 60.00660 * 16 14 12 18 18 H 1.48503 * 109.46935 * 180.02562 * 16 14 12 19 19 H 1.48502 * 109.47258 * 300.00257 * 16 14 12 20 20 C 1.38151 * 120.70647 * 119.71857 * 7 5 4 21 21 C 1.48562 * 111.00142 * 244.57836 * 2 1 3 22 22 H 1.08999 * 109.47456 * 59.87785 * 1 2 3 23 23 H 1.09004 * 109.46834 * 179.87715 * 1 2 3 24 24 H 1.08998 * 109.47207 * 299.87566 * 1 2 3 25 25 H 1.08998 * 110.41528 * 82.17831 * 3 2 1 26 26 H 1.08997 * 110.50874 * 319.78619 * 3 2 1 27 27 H 1.08996 * 110.32596 * 264.95760 * 4 3 2 28 28 H 1.08997 * 110.32827 * 142.74551 * 4 3 2 29 29 H 1.07999 * 120.22261 * 359.97438 * 8 7 5 30 30 H 1.08001 * 119.49322 * 179.97438 * 9 8 7 31 31 H 0.97000 * 119.99882 * 179.97438 * 15 14 12 32 32 H 1.08001 * 120.50833 * 0.02562 * 20 7 5 33 33 H 1.09000 * 110.41111 * 40.26361 * 21 2 1 34 34 H 1.08989 * 110.41482 * 277.81625 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 6 2.0013 1.3870 0.0000 4 6 3.4432 1.2502 -0.5344 5 6 3.4432 -0.0539 -1.3585 6 1 4.1483 -0.7693 -0.9351 7 6 3.7894 0.2355 -2.7963 8 6 3.0000 1.0883 -3.5584 9 6 3.3406 1.3377 -4.8803 10 7 4.3989 0.7791 -5.4238 11 6 5.1866 -0.0471 -4.7297 12 6 6.3162 -0.6289 -5.3503 13 1 6.9551 -1.2968 -4.7917 14 6 6.6063 -0.3389 -6.6893 15 7 5.8331 0.4701 -7.3653 16 14 8.0981 -1.1080 -7.5094 17 1 7.9701 -2.5872 -7.4823 18 1 8.1832 -0.6438 -8.9174 19 1 9.3271 -0.7040 -6.7803 20 6 4.9015 -0.3367 -3.3831 21 6 2.0014 -0.5954 -1.2526 22 1 -0.3634 0.5157 -0.8889 23 1 -0.3633 -1.0277 -0.0022 24 1 -0.3633 0.5119 0.8911 25 1 2.0078 1.7917 1.0120 26 1 1.4103 2.0228 -0.6591 27 1 4.1482 1.1749 0.2934 28 1 3.6936 2.0996 -1.1700 29 1 2.1269 1.5532 -3.1251 30 1 2.7261 2.0003 -5.4718 31 1 6.0344 0.6712 -8.2927 32 1 5.5389 -1.0009 -2.8183 33 1 1.4099 -0.2713 -2.1089 34 1 2.0079 -1.6831 -1.1838 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259612145.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:16:10 Heat of formation + Delta-G solvation = 31.291769 kcal Electronic energy + Delta-G solvation = -15862.275072 eV Core-core repulsion = 13373.489735 eV Total energy + Delta-G solvation = -2488.785337 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 232.127 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -39.22498 -37.61632 -33.82499 -32.73358 -30.10791 -29.83921 -27.98711 -25.75737 -25.27628 -21.84362 -21.54145 -20.85612 -19.51652 -17.11388 -15.83662 -15.66148 -15.06532 -14.39645 -14.17876 -13.98247 -13.84623 -13.21239 -12.73561 -12.39414 -12.21264 -11.81299 -11.50361 -11.33648 -11.32403 -11.20589 -10.98288 -10.84168 -10.61618 -10.49686 -10.08788 -9.77732 -9.32751 -8.40856 -7.97543 -7.60986 -7.53482 -6.38678 -4.51530 2.77439 2.95408 3.08450 3.10736 3.20384 3.95039 4.20377 4.72977 4.94193 5.05795 5.27312 5.46109 5.52959 5.55174 5.76029 5.84839 5.89608 5.95663 5.99669 6.08697 6.15409 6.24374 6.39510 6.47475 6.54644 6.80053 6.94473 6.97499 7.12709 7.15443 7.38183 7.57566 7.77855 8.06110 8.24104 8.67765 8.94541 10.13942 10.33283 Molecular weight = 232.13amu Principal moments of inertia in cm(-1) A = 0.055755 B = 0.005638 C = 0.005437 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 502.077657 B = 4965.450841 C = 5148.728564 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 N -0.520 5.520 3 C 0.033 3.967 4 C -0.114 4.114 5 C -0.045 4.045 6 H 0.077 0.923 7 C -0.020 4.020 8 C -0.313 4.313 9 C 0.123 3.877 10 N -0.486 5.486 11 C 0.256 3.744 12 C -0.434 4.434 13 H 0.082 0.918 14 C 0.070 3.930 15 N -0.717 5.717 16 Si 0.907 3.093 17 H -0.265 1.265 18 H -0.277 1.277 19 H -0.265 1.265 20 C -0.267 4.267 21 C 0.041 3.959 22 H 0.028 0.972 23 H 0.066 0.934 24 H 0.064 0.936 25 H 0.075 0.925 26 H 0.042 0.958 27 H 0.066 0.934 28 H 0.075 0.925 29 H 0.088 0.912 30 H 0.115 0.885 31 H 0.273 0.727 32 H 0.097 0.903 33 H 0.054 0.946 34 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.268 0.281 8.446 9.958 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 N -0.244 5.244 3 C -0.095 4.095 4 C -0.152 4.152 5 C -0.064 4.064 6 H 0.095 0.905 7 C -0.026 4.026 8 C -0.336 4.336 9 C -0.042 4.042 10 N -0.199 5.199 11 C 0.131 3.869 12 C -0.465 4.465 13 H 0.100 0.900 14 C -0.156 4.156 15 N -0.338 5.338 16 Si 0.731 3.269 17 H -0.189 1.189 18 H -0.202 1.202 19 H -0.189 1.189 20 C -0.290 4.290 21 C -0.086 4.086 22 H 0.046 0.954 23 H 0.085 0.915 24 H 0.083 0.917 25 H 0.093 0.907 26 H 0.061 0.939 27 H 0.085 0.915 28 H 0.093 0.907 29 H 0.106 0.894 30 H 0.133 0.867 31 H 0.084 0.916 32 H 0.115 0.885 33 H 0.072 0.928 34 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -4.906 0.230 7.832 9.244 hybrid contribution 0.011 -0.017 -0.217 0.218 sum -4.895 0.213 7.614 9.054 Atomic orbital electron populations 1.22478 0.88623 1.01896 1.00504 1.65386 1.07701 1.15484 1.35804 1.23111 0.95919 0.90029 1.00407 1.22360 0.95607 0.98211 0.98999 1.20753 0.95874 0.96605 0.93196 0.90458 1.19458 0.94720 0.95669 0.92763 1.21025 1.04676 1.10640 0.97257 1.22493 0.94265 0.95894 0.91581 1.68747 1.04465 1.10919 1.35779 1.18596 0.91680 0.88725 0.87862 1.19586 1.07540 1.23677 0.95685 0.89965 1.26068 0.97418 0.94367 0.97710 1.70128 1.32192 1.22869 1.08657 0.86406 0.81774 0.80319 0.78414 1.18936 1.20225 1.18937 1.21626 1.00946 1.08868 0.97578 1.23237 0.95171 0.99699 0.90542 0.95385 0.91498 0.91687 0.90668 0.93918 0.91485 0.90656 0.89423 0.86712 0.91612 0.88461 0.92811 0.90527 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.17 9.53 60.06 0.57 0.74 16 2 N -0.52 -7.49 5.66 -238.24 -1.35 -8.83 16 3 C 0.03 0.46 6.49 -2.18 -0.01 0.44 16 4 C -0.11 -1.76 6.45 -25.35 -0.16 -1.93 16 5 C -0.05 -0.80 3.30 -90.39 -0.30 -1.10 16 6 H 0.08 1.35 7.99 -51.93 -0.41 0.93 16 7 C -0.02 -0.43 4.74 -104.38 -0.49 -0.92 16 8 C -0.31 -6.91 8.34 -39.12 -0.33 -7.23 16 9 C 0.12 3.01 11.18 -17.53 -0.20 2.81 16 10 N -0.49 -13.56 7.87 -11.12 -0.09 -13.64 16 11 C 0.26 7.06 6.55 -84.98 -0.56 6.51 16 12 C -0.43 -11.72 9.14 -37.70 -0.34 -12.06 16 13 H 0.08 2.07 7.85 -52.49 -0.41 1.66 16 14 C 0.07 1.79 5.50 -17.34 -0.10 1.69 16 15 N -0.72 -19.33 11.46 55.55 0.64 -18.69 16 16 Si 0.91 18.70 29.56 -169.99 -5.02 13.67 16 17 H -0.26 -5.37 7.11 56.52 0.40 -4.97 16 18 H -0.28 -5.57 7.11 56.52 0.40 -5.17 16 19 H -0.26 -5.37 7.11 56.52 0.40 -4.97 16 20 C -0.27 -6.55 9.50 -38.70 -0.37 -6.92 16 21 C 0.04 0.66 5.95 -2.18 -0.01 0.65 16 22 H 0.03 0.33 7.98 -51.93 -0.41 -0.08 16 23 H 0.07 0.73 8.14 -51.93 -0.42 0.31 16 24 H 0.06 0.67 8.14 -51.93 -0.42 0.25 16 25 H 0.07 0.91 8.14 -51.93 -0.42 0.49 16 26 H 0.04 0.59 7.97 -51.93 -0.41 0.18 16 27 H 0.07 0.95 8.14 -51.93 -0.42 0.53 16 28 H 0.07 1.25 7.39 -51.93 -0.38 0.87 16 29 H 0.09 1.75 7.71 -52.49 -0.40 1.34 16 30 H 0.12 2.52 8.06 -52.49 -0.42 2.09 16 31 H 0.27 6.67 8.29 -40.82 -0.34 6.33 16 32 H 0.10 2.23 8.02 -52.49 -0.42 1.81 16 33 H 0.05 0.93 6.61 -51.93 -0.34 0.58 16 34 H 0.08 1.19 8.14 -51.93 -0.42 0.77 16 LS Contribution 281.11 15.07 4.24 4.24 Total: -1.00 -28.86 281.11 -8.76 -37.63 By element: Atomic # 1 Polarization: 7.82 SS G_CDS: -4.88 Total: 2.95 kcal Atomic # 6 Polarization: -15.02 SS G_CDS: -2.30 Total: -17.32 kcal Atomic # 7 Polarization: -40.37 SS G_CDS: -0.80 Total: -41.17 kcal Atomic # 14 Polarization: 18.70 SS G_CDS: -5.02 Total: 13.67 kcal Total LS contribution 4.24 Total: 4.24 kcal Total: -28.86 -8.76 -37.63 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259612145.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.918 kcal (2) G-P(sol) polarization free energy of solvation -28.863 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.056 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.764 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.627 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.292 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds