Wall clock time and date at job start Mon Mar 30 2020 03:20:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.30770 * 1 3 3 Si 1.86798 * 120.00409 * 2 1 4 4 H 1.48501 * 109.47110 * 179.97438 * 3 2 1 5 5 H 1.48501 * 109.46877 * 299.99397 * 3 2 1 6 6 H 1.48493 * 109.47101 * 59.99256 * 3 2 1 7 7 C 1.39958 * 119.99496 * 179.97438 * 2 1 3 8 8 H 1.08002 * 119.99759 * 179.97438 * 7 2 1 9 9 C 1.41776 * 120.00429 * 0.02562 * 7 2 1 10 10 N 1.32354 * 127.42934 * 359.97438 * 9 7 2 11 11 O 1.20734 * 111.52716 * 180.02562 * 10 9 7 12 12 C 1.34164 * 113.15412 * 359.97438 * 11 10 9 13 13 O 1.35505 * 126.51287 * 180.02562 * 12 11 10 14 14 C 1.36014 * 106.97318 * 0.02562 * 12 11 10 15 15 Br 1.89095 * 128.39744 * 179.97438 * 14 12 11 16 16 H 0.96998 * 119.99201 * 0.02562 * 1 2 3 17 17 H 0.96703 * 113.99901 * 359.97438 * 13 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3077 0.0000 0.0000 3 14 2.2418 1.6177 0.0000 4 1 3.7018 1.3462 0.0006 5 1 1.8832 2.3963 -1.2126 6 1 1.8830 2.3964 1.2123 7 6 2.0074 -1.2121 0.0005 8 1 3.0874 -1.2122 0.0001 9 6 1.2985 -2.4399 0.0005 10 7 -0.0139 -2.6111 0.0005 11 8 -0.3080 -3.7820 0.0010 12 6 0.7599 -4.5942 0.0009 13 8 0.7424 -5.9491 0.0009 14 6 1.8634 -3.7990 0.0008 15 35 3.6826 -4.3148 0.0013 16 1 -0.4849 0.8401 -0.0004 17 1 -0.1461 -6.3310 0.0014 RHF calculation, no. of doubly occupied orbitals= 30 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260057419.mol2 17 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:20:41 Heat of formation + Delta-G solvation = 2.822940 kcal Electronic energy + Delta-G solvation = -9482.611245 eV Core-core repulsion = 7270.512927 eV Total energy + Delta-G solvation = -2212.098319 eV No. of doubly occupied orbitals = 30 Molecular weight (most abundant/longest-lived isotopes) = 232.947 amu Computer time = 0.07 seconds Orbital eigenvalues (eV) -42.72050 -37.23867 -34.06824 -31.88661 -29.91850 -28.29003 -26.33680 -21.57060 -20.70456 -18.81866 -16.17934 -16.01123 -15.00803 -14.69453 -14.04414 -12.99128 -12.80948 -12.10104 -11.32945 -11.25375 -10.90790 -10.53387 -10.24940 -9.65938 -9.60196 -8.83458 -8.22622 -7.44854 -6.65828 -4.62509 2.66697 2.82532 2.99191 3.11834 3.18046 3.85211 3.87329 3.98241 5.03815 5.25511 6.05658 6.59466 6.87214 7.24180 7.78080 8.28219 8.44544 8.81793 10.26362 10.37529 Molecular weight = 232.95amu Principal moments of inertia in cm(-1) A = 0.035849 B = 0.012814 C = 0.009471 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 780.867586 B = 2184.604269 C = 2955.630870 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.765 5.765 2 C 0.069 3.931 3 Si 0.918 3.082 4 H -0.259 1.259 5 H -0.273 1.273 6 H -0.273 1.273 7 C -0.430 4.430 8 H 0.093 0.907 9 C 0.214 3.786 10 N -0.404 5.404 11 O 0.014 5.986 12 C 0.163 3.837 13 O -0.428 6.428 14 C -0.282 4.282 15 Br -0.031 7.031 16 H 0.278 0.722 17 H 0.398 0.602 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.839 -6.143 0.001 7.244 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.393 5.393 2 C -0.152 4.152 3 Si 0.742 3.258 4 H -0.182 1.182 5 H -0.199 1.199 6 H -0.199 1.199 7 C -0.468 4.468 8 H 0.111 0.889 9 C 0.067 3.933 10 N -0.146 5.146 11 O -0.029 6.029 12 C 0.052 3.948 13 O -0.230 6.230 14 C -0.366 4.366 15 Br 0.052 6.948 16 H 0.089 0.911 17 H 0.250 0.750 Dipole moment (debyes) X Y Z Total from point charges 3.857 -5.604 0.001 6.802 hybrid contribution 0.109 0.228 0.000 0.253 sum 3.966 -5.375 0.001 6.680 Atomic orbital electron populations 1.69879 1.07244 1.28747 1.33381 1.25903 0.94938 1.01189 0.93167 0.86094 0.80733 0.80549 0.78457 1.18210 1.19868 1.19872 1.18803 0.94393 0.87171 1.46416 0.88879 1.20975 0.87328 0.90530 0.94423 1.74912 1.14239 0.88006 1.37461 1.84838 1.31521 1.13637 1.72877 1.21767 0.89909 0.82619 1.00497 1.85182 1.34035 1.12141 1.91613 1.22349 0.88751 0.95009 1.30519 1.96287 1.08971 1.91063 1.98512 0.91119 0.75012 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.77 -21.12 12.04 55.55 0.67 -20.45 13 2 C 0.07 1.82 5.49 -17.36 -0.10 1.72 13 3 Si 0.92 19.22 29.56 -169.99 -5.02 14.19 13 4 H -0.26 -5.28 7.11 56.52 0.40 -4.88 13 5 H -0.27 -5.61 7.11 56.52 0.40 -5.21 13 6 H -0.27 -5.61 7.11 56.52 0.40 -5.21 13 7 C -0.43 -11.79 9.48 -37.59 -0.36 -12.15 13 8 H 0.09 2.42 7.85 -52.49 -0.41 2.01 13 9 C 0.21 5.95 7.00 -82.66 -0.58 5.38 13 10 N -0.40 -11.45 10.48 33.35 0.35 -11.10 13 11 O 0.01 0.34 11.09 -6.20 -0.07 0.27 13 12 C 0.16 3.64 8.68 29.93 0.26 3.90 13 13 O -0.43 -7.37 13.64 -41.31 -0.56 -7.94 13 14 C -0.28 -6.92 7.08 -36.75 -0.26 -7.18 13 15 Br -0.03 -0.64 34.13 -68.01 -2.32 -2.96 13 16 H 0.28 6.93 8.29 -40.82 -0.34 6.59 13 17 H 0.40 4.34 9.06 45.56 0.41 4.75 13 LS Contribution 195.20 15.07 2.94 2.94 Total: -1.00 -31.13 195.20 -4.18 -35.31 By element: Atomic # 1 Polarization: -2.81 SS G_CDS: 0.87 Total: -1.94 kcal Atomic # 6 Polarization: -7.30 SS G_CDS: -1.03 Total: -8.33 kcal Atomic # 7 Polarization: -32.57 SS G_CDS: 1.02 Total: -31.55 kcal Atomic # 8 Polarization: -7.03 SS G_CDS: -0.63 Total: -7.66 kcal Atomic # 14 Polarization: 19.22 SS G_CDS: -5.02 Total: 14.19 kcal Atomic # 35 Polarization: -0.64 SS G_CDS: -2.32 Total: -2.96 kcal Total LS contribution 2.94 Total: 2.94 kcal Total: -31.13 -4.18 -35.31 kcal The number of atoms in the molecule is 17 The average number of expansion shells was 13.00 The maximum number of expansion shells was 13 The minimum number of expansion shells was 13 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260057419.mol2 17 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.137 kcal (2) G-P(sol) polarization free energy of solvation -31.134 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.004 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.181 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.314 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.823 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.07 seconds