Wall clock time and date at job start Mon Mar 30 2020 03:18:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46895 * 1 3 3 C 1.48560 * 111.00195 * 2 1 4 4 C 1.54379 * 104.59588 * 200.96375 * 3 2 1 5 5 C 1.54263 * 105.06016 * 23.85103 * 4 3 2 6 6 H 1.08997 * 110.31918 * 119.00285 * 5 4 3 7 7 C 1.50702 * 110.32019 * 241.10277 * 5 4 3 8 8 H 1.08002 * 119.99441 * 118.55329 * 7 5 4 9 9 C 1.37871 * 120.00075 * 298.54905 * 7 5 4 10 10 N 1.31514 * 120.00481 * 359.97438 * 9 7 5 11 11 Si 1.86803 * 119.99886 * 179.73007 * 9 7 5 12 12 H 1.48502 * 109.46964 * 270.27509 * 11 9 7 13 13 H 1.48505 * 109.47036 * 30.26897 * 11 9 7 14 14 H 1.48490 * 109.47395 * 150.27411 * 11 9 7 15 15 C 1.48559 * 111.00040 * 244.58286 * 2 1 3 16 16 H 1.09006 * 110.40903 * 40.25589 * 15 2 1 17 17 C 1.50702 * 110.40989 * 277.82114 * 15 2 1 18 18 C 1.38227 * 119.62043 * 9.82224 * 17 15 2 19 19 C 1.38626 * 119.16206 * 179.97438 * 18 17 15 20 20 C 1.38682 * 118.42198 * 0.02562 * 19 18 17 21 21 C 1.38179 * 119.15877 * 0.02562 * 20 19 18 22 22 N 1.31858 * 119.61440 * 189.55242 * 17 15 2 23 23 H 1.09002 * 109.47499 * 60.12519 * 1 2 3 24 24 H 1.09008 * 109.47390 * 180.12690 * 1 2 3 25 25 H 1.09000 * 109.47502 * 300.12234 * 1 2 3 26 26 H 1.08994 * 110.41161 * 82.18201 * 3 2 1 27 27 H 1.09009 * 110.50837 * 319.79225 * 3 2 1 28 28 H 1.09002 * 110.32116 * 264.95580 * 4 3 2 29 29 H 1.08997 * 110.32097 * 142.74723 * 4 3 2 30 30 H 0.97005 * 119.99656 * 359.72741 * 10 9 7 31 31 H 1.07999 * 120.41600 * 359.95621 * 18 17 15 32 32 H 1.08001 * 120.79099 * 180.02562 * 19 18 17 33 33 H 1.07995 * 120.41743 * 179.97438 * 20 19 18 34 34 H 1.08000 * 119.61298 * 180.02562 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 6 2.0014 1.3869 0.0000 4 6 3.4432 1.2501 -0.5345 5 6 3.4432 -0.0540 -1.3586 6 1 3.6953 0.1552 -2.3982 7 6 4.4180 -1.0430 -0.7733 8 1 4.0653 -1.9944 -0.4034 9 6 5.7600 -0.7332 -0.7100 10 7 6.1895 0.4251 -1.1609 11 14 6.9673 -1.9561 0.0224 12 1 7.0911 -1.7154 1.4826 13 1 6.4756 -3.3378 -0.2114 14 1 8.2947 -1.7875 -0.6214 15 6 2.0013 -0.5953 -1.2527 16 1 1.4097 -0.2712 -2.1089 17 6 2.0103 -2.0993 -1.1575 18 6 1.3746 -2.7206 -0.0989 19 6 1.3882 -4.1046 -0.0210 20 6 2.0442 -4.8152 -1.0149 21 6 2.6585 -4.1250 -2.0424 22 7 2.6198 -2.8074 -2.0878 23 1 -0.3634 0.5119 -0.8911 24 1 -0.3634 -1.0277 0.0023 25 1 -0.3634 0.5157 0.8889 26 1 2.0079 1.7916 1.0120 27 1 1.4103 2.0229 -0.6591 28 1 4.1483 1.1748 0.2934 29 1 3.6935 2.0995 -1.1700 30 1 5.5627 1.0600 -1.5416 31 1 0.8738 -2.1351 0.6580 32 1 0.8996 -4.6172 0.7944 33 1 2.0752 -5.8943 -0.9858 34 1 3.1711 -4.6711 -2.8205 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260470785.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:18:00 Heat of formation + Delta-G solvation = 51.099434 kcal Electronic energy + Delta-G solvation = -16768.996403 eV Core-core repulsion = 14281.069991 eV Total energy + Delta-G solvation = -2487.926412 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 232.127 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -39.89952 -37.88361 -33.55726 -31.94529 -31.23228 -30.31119 -27.53361 -25.32764 -23.80829 -22.85730 -22.39201 -20.04983 -19.43837 -17.03404 -16.05700 -15.54957 -15.25227 -14.91258 -14.30214 -13.88584 -13.60310 -13.21410 -12.81390 -12.52663 -12.30948 -11.88387 -11.64432 -11.48090 -10.94728 -10.72076 -10.61940 -10.41448 -10.05602 -9.86635 -9.69202 -9.20569 -8.67593 -8.43890 -8.24751 -8.04341 -7.92225 -6.16994 -3.84660 1.80561 1.94962 3.50717 3.54451 3.69993 4.33420 4.55020 4.64924 5.14608 5.28547 5.35811 5.46840 5.54693 5.58578 5.64573 5.73940 5.82488 5.91105 6.03769 6.07211 6.15016 6.25205 6.36963 6.49808 6.58784 6.75061 6.82119 6.98946 7.17824 7.28389 7.41730 7.59714 7.78344 8.35941 8.60993 8.80363 9.04852 9.81166 11.21050 Molecular weight = 232.13amu Principal moments of inertia in cm(-1) A = 0.018554 B = 0.013989 C = 0.009055 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1508.784010 B = 2001.148387 C = 3091.581274 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.005 3.995 2 N -0.502 5.502 3 C 0.039 3.961 4 C -0.118 4.118 5 C 0.051 3.949 6 H 0.027 0.973 7 C -0.556 4.556 8 H 0.051 0.949 9 C 0.016 3.984 10 N -0.921 5.921 11 Si 1.064 2.936 12 H -0.291 1.291 13 H -0.292 1.292 14 H -0.287 1.287 15 C 0.116 3.884 16 H 0.048 0.952 17 C 0.194 3.806 18 C -0.170 4.170 19 C -0.087 4.087 20 C -0.199 4.199 21 C 0.098 3.902 22 N -0.457 5.457 23 H 0.022 0.978 24 H 0.068 0.932 25 H 0.064 0.936 26 H 0.070 0.930 27 H 0.030 0.970 28 H 0.075 0.925 29 H 0.044 0.956 30 H 0.269 0.731 31 H 0.139 0.861 32 H 0.122 0.878 33 H 0.122 0.878 34 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.805 -4.564 1.644 11.844 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 N -0.226 5.226 3 C -0.089 4.089 4 C -0.156 4.156 5 C 0.032 3.968 6 H 0.045 0.955 7 C -0.594 4.594 8 H 0.069 0.931 9 C -0.187 4.187 10 N -0.559 5.559 11 Si 0.894 3.106 12 H -0.218 1.218 13 H -0.218 1.218 14 H -0.212 1.212 15 C 0.007 3.993 16 H 0.065 0.935 17 C 0.057 3.943 18 C -0.190 4.190 19 C -0.113 4.113 20 C -0.219 4.219 21 C -0.060 4.060 22 N -0.166 5.166 23 H 0.040 0.960 24 H 0.086 0.914 25 H 0.083 0.917 26 H 0.089 0.911 27 H 0.048 0.952 28 H 0.094 0.906 29 H 0.062 0.938 30 H 0.081 0.919 31 H 0.157 0.843 32 H 0.140 0.860 33 H 0.140 0.860 34 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -8.640 -4.666 1.783 9.980 hybrid contribution -2.285 0.145 -0.214 2.299 sum -10.925 -4.521 1.568 11.927 Atomic orbital electron populations 1.22679 0.89788 1.01750 1.00179 1.65124 1.06087 1.15824 1.35559 1.23077 0.97208 0.88578 1.00043 1.22611 0.93736 0.98569 1.00728 1.19467 0.89178 0.92634 0.95559 0.95523 1.21871 0.93070 1.02256 1.42238 0.93064 1.25587 0.97431 0.99352 0.96299 1.70758 1.38743 1.07625 1.38738 0.83594 0.75879 0.74952 0.76137 1.21788 1.21809 1.21242 1.21502 0.99301 0.89049 0.89440 0.93461 1.20624 0.88922 0.95367 0.89397 1.22052 1.02317 0.94541 1.00102 1.21431 0.97737 0.94364 0.97765 1.21933 1.02181 1.00508 0.97269 1.22600 0.96143 0.90300 0.96995 1.67427 1.13874 1.07127 1.28181 0.95993 0.91374 0.91724 0.91144 0.95171 0.90577 0.93773 0.91936 0.84344 0.85991 0.86000 0.83725 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.07 8.83 60.06 0.53 0.60 16 2 N -0.50 -9.60 4.45 -231.72 -1.03 -10.63 16 3 C 0.04 0.73 6.49 -2.18 -0.01 0.71 16 4 C -0.12 -2.69 5.03 -25.35 -0.13 -2.82 16 5 C 0.05 1.28 2.47 -90.39 -0.22 1.05 16 6 H 0.03 0.73 8.04 -51.93 -0.42 0.31 16 7 C -0.56 -15.53 7.37 -34.44 -0.25 -15.78 16 8 H 0.05 1.48 5.66 -52.49 -0.30 1.19 16 9 C 0.02 0.46 5.09 -17.82 -0.09 0.37 16 10 N -0.92 -27.77 13.26 55.43 0.74 -27.04 16 11 Si 1.06 26.43 29.90 -169.99 -5.08 21.35 16 12 H -0.29 -7.01 7.11 56.52 0.40 -6.60 16 13 H -0.29 -7.06 7.11 56.52 0.40 -6.66 16 14 H -0.29 -7.08 7.11 56.52 0.40 -6.68 16 15 C 0.12 2.49 2.67 -67.23 -0.18 2.31 16 16 H 0.05 0.99 7.90 -51.93 -0.41 0.58 16 17 C 0.19 4.15 4.16 -82.58 -0.34 3.80 16 18 C -0.17 -3.16 8.52 -39.44 -0.34 -3.50 16 19 C -0.09 -1.41 10.18 -39.27 -0.40 -1.80 16 20 C -0.20 -3.18 10.11 -39.44 -0.40 -3.58 16 21 C 0.10 1.80 11.18 -17.55 -0.20 1.61 16 22 N -0.46 -10.07 9.01 -9.47 -0.09 -10.16 16 23 H 0.02 0.31 7.97 -51.93 -0.41 -0.10 16 24 H 0.07 0.96 5.98 -51.92 -0.31 0.65 16 25 H 0.06 0.84 8.14 -51.93 -0.42 0.42 16 26 H 0.07 1.23 8.14 -51.93 -0.42 0.81 16 27 H 0.03 0.51 7.98 -51.92 -0.41 0.10 16 28 H 0.08 1.95 7.24 -51.93 -0.38 1.58 16 29 H 0.04 0.97 7.92 -51.93 -0.41 0.56 16 30 H 0.27 7.99 6.01 -40.82 -0.25 7.74 16 31 H 0.14 2.40 5.38 -52.49 -0.28 2.12 16 32 H 0.12 1.56 8.06 -52.49 -0.42 1.14 16 33 H 0.12 1.53 8.06 -52.49 -0.42 1.10 16 34 H 0.15 2.25 8.06 -52.49 -0.42 1.83 16 LS Contribution 270.59 15.07 4.08 4.08 Total: -1.00 -31.44 270.59 -7.91 -39.34 By element: Atomic # 1 Polarization: 4.57 SS G_CDS: -4.49 Total: 0.08 kcal Atomic # 6 Polarization: -14.99 SS G_CDS: -2.03 Total: -17.02 kcal Atomic # 7 Polarization: -47.45 SS G_CDS: -0.38 Total: -47.83 kcal Atomic # 14 Polarization: 26.43 SS G_CDS: -5.08 Total: 21.35 kcal Total LS contribution 4.08 Total: 4.08 kcal Total: -31.44 -7.91 -39.34 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260470785.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 90.443 kcal (2) G-P(sol) polarization free energy of solvation -31.436 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.007 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.908 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.344 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.099 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds