Wall clock time and date at job start Mon Mar 30 2020 03:37:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.52998 * 109.46927 * 2 1 4 4 N 1.46495 * 109.47042 * 120.00097 * 2 1 3 5 5 C 1.36872 * 119.99738 * 81.93081 * 4 2 1 6 6 H 1.07999 * 119.99686 * 208.14583 * 5 4 2 7 7 C 1.39049 * 120.00602 * 28.14834 * 5 4 2 8 8 N 1.31364 * 119.99521 * 24.70370 * 7 5 4 9 9 Si 1.86793 * 120.00226 * 204.71185 * 7 5 4 10 10 H 1.48497 * 109.47299 * 59.99280 * 9 7 5 11 11 H 1.48499 * 109.47482 * 179.97438 * 9 7 5 12 12 H 1.48506 * 109.46868 * 299.99464 * 9 7 5 13 13 C 1.34775 * 119.99974 * 261.92539 * 4 2 1 14 14 O 1.21596 * 119.99633 * 204.16518 * 13 4 2 15 15 C 1.47714 * 119.99993 * 24.15857 * 13 4 2 16 16 C 1.40094 * 120.56528 * 186.41629 * 15 13 4 17 17 C 1.38337 * 118.28372 * 179.97438 * 16 15 13 18 18 C 1.38366 * 119.31040 * 0.24889 * 17 16 15 19 19 N 1.31939 * 121.09331 * 359.47686 * 18 17 16 20 20 C 1.31685 * 121.88716 * 0.54106 * 19 18 17 21 21 H 1.08994 * 109.47016 * 275.73940 * 1 2 3 22 22 H 1.09000 * 109.47294 * 35.74187 * 1 2 3 23 23 H 1.09000 * 109.46866 * 155.74113 * 1 2 3 24 24 H 1.09006 * 109.46777 * 240.00595 * 2 1 3 25 25 H 1.08997 * 109.47311 * 227.53943 * 3 2 1 26 26 H 1.08999 * 109.47392 * 347.53946 * 3 2 1 27 27 H 1.08999 * 109.47032 * 107.53993 * 3 2 1 28 28 H 0.97004 * 119.99287 * 180.02562 * 8 7 5 29 29 H 1.08005 * 120.85950 * 359.95839 * 16 15 13 30 30 H 1.08003 * 120.34571 * 179.97438 * 17 16 15 31 31 H 1.08003 * 119.45326 * 179.72624 * 18 17 16 32 32 H 1.07995 * 119.72344 * 179.70679 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 2.0183 -0.6906 1.1961 5 6 2.0895 -2.0573 1.2160 6 1 1.9984 -2.5892 2.1516 7 6 2.2793 -2.7611 0.0319 8 7 2.8591 -2.1784 -0.9927 9 14 1.7094 -4.5349 -0.1020 10 1 0.2434 -4.6023 0.1246 11 1 2.0250 -5.0554 -1.4564 12 1 2.4064 -5.3572 0.9196 13 6 2.3975 0.0198 2.2768 14 8 3.1847 -0.4564 3.0719 15 6 1.8570 1.3770 2.4954 16 6 2.3415 2.1775 3.5380 17 6 1.8020 3.4410 3.6994 18 6 0.8072 3.8679 2.8377 19 7 0.3736 3.0942 1.8608 20 6 0.8550 1.8841 1.6662 21 1 -0.3633 0.1028 1.0225 22 1 -0.3634 0.8341 -0.6003 23 1 -0.3633 -0.9369 -0.4222 24 1 1.8933 -0.5138 -0.8901 25 1 2.8151 1.5539 -0.7581 26 1 1.2150 2.1195 -0.2217 27 1 2.4531 1.6818 0.9799 28 1 2.9911 -2.6692 -1.8189 29 1 3.1160 1.8173 4.1990 30 1 2.1506 4.0859 4.4926 31 1 0.3812 4.8523 2.9644 32 1 0.4712 1.2787 0.8584 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000057491640.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:37:48 Heat of formation + Delta-G solvation = 114.943225 kcal Electronic energy + Delta-G solvation = -17127.485329 eV Core-core repulsion = 14479.182818 eV Total energy + Delta-G solvation = -2648.302510 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 234.111 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -41.28990 -38.10656 -36.09478 -33.52600 -31.93096 -31.00074 -30.07205 -26.76719 -25.35233 -23.46031 -23.14059 -21.07721 -19.19149 -17.29938 -17.03748 -16.04490 -15.66127 -14.95905 -14.55277 -14.39214 -14.01326 -13.56795 -13.14590 -12.81838 -12.33116 -12.13129 -11.87848 -11.58923 -11.45813 -11.18735 -10.95658 -10.63490 -10.45952 -10.33868 -9.91318 -9.36729 -9.23091 -9.09611 -8.50434 -7.92509 -7.66260 -6.44235 -4.00271 1.20750 1.73517 3.11322 3.18204 3.21151 3.71188 4.00325 4.40364 4.60053 4.83325 4.97444 5.18127 5.35541 5.41488 5.47025 5.55885 5.68452 5.92402 5.92694 6.04650 6.22633 6.28889 6.31621 6.50564 6.61516 6.67228 6.89101 7.07327 7.23269 7.47970 8.02125 8.33137 8.38719 9.03501 9.24141 9.81849 10.51977 Molecular weight = 234.11amu Principal moments of inertia in cm(-1) A = 0.041239 B = 0.008768 C = 0.007926 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 678.806920 B = 3192.537882 C = 3531.608153 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.098 3.902 3 C -0.215 4.215 4 N -0.428 5.428 5 C -0.296 4.296 6 H 0.097 0.903 7 C 0.033 3.967 8 N -0.855 5.855 9 Si 0.923 3.077 10 H -0.271 1.271 11 H -0.282 1.282 12 H -0.271 1.271 13 C 0.488 3.512 14 O -0.574 6.574 15 C -0.173 4.173 16 C -0.045 4.045 17 C -0.199 4.199 18 C 0.091 3.909 19 N -0.513 5.513 20 C 0.097 3.903 21 H 0.065 0.935 22 H 0.063 0.937 23 H 0.068 0.932 24 H 0.145 0.855 25 H 0.054 0.946 26 H 0.076 0.924 27 H 0.096 0.904 28 H 0.273 0.727 29 H 0.137 0.863 30 H 0.129 0.871 31 H 0.147 0.853 32 H 0.224 0.776 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.880 7.364 0.867 8.877 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C -0.007 4.007 3 C -0.271 4.271 4 N -0.146 5.146 5 C -0.423 4.423 6 H 0.115 0.885 7 C -0.172 4.172 8 N -0.493 5.493 9 Si 0.749 3.251 10 H -0.197 1.197 11 H -0.207 1.207 12 H -0.196 1.196 13 C 0.278 3.722 14 O -0.459 6.459 15 C -0.178 4.178 16 C -0.071 4.071 17 C -0.220 4.220 18 C -0.064 4.064 19 N -0.223 5.223 20 C -0.061 4.061 21 H 0.083 0.917 22 H 0.082 0.918 23 H 0.087 0.913 24 H 0.161 0.839 25 H 0.073 0.927 26 H 0.094 0.906 27 H 0.113 0.887 28 H 0.083 0.917 29 H 0.155 0.845 30 H 0.147 0.853 31 H 0.165 0.835 32 H 0.239 0.761 Dipole moment (debyes) X Y Z Total from point charges -5.063 7.366 0.506 8.953 hybrid contribution 0.567 -0.936 0.443 1.181 sum -4.496 6.430 0.949 7.903 Atomic orbital electron populations 1.22436 0.97516 1.02199 1.01653 1.21716 0.91951 0.92076 0.94932 1.24056 1.01731 0.96952 1.04389 1.43471 1.54096 1.05864 1.11173 1.19571 1.47487 0.79791 0.95475 0.88534 1.25380 0.95418 1.00327 0.96079 1.69716 1.36209 1.38504 1.04826 0.86042 0.79563 0.81874 0.77663 1.19657 1.20740 1.19565 1.17797 0.84326 0.84144 0.85969 1.90605 1.34854 1.71204 1.49201 1.21423 1.00239 0.97943 0.98199 1.21612 0.97646 0.92661 0.95154 1.21888 1.00434 0.97286 1.02348 1.22744 0.93760 0.98916 0.90941 1.67843 1.28178 1.05775 1.20504 1.26057 0.90335 0.93002 0.96665 0.91650 0.91807 0.91301 0.83853 0.92696 0.90601 0.88662 0.91682 0.84497 0.85345 0.83545 0.76075 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -3.26 8.14 37.16 0.30 -2.96 16 2 C 0.10 2.10 2.73 -67.93 -0.19 1.92 16 3 C -0.22 -4.18 7.67 36.95 0.28 -3.89 16 4 N -0.43 -10.77 2.54 -108.84 -0.28 -11.05 16 5 C -0.30 -7.93 8.94 -15.00 -0.13 -8.07 16 6 H 0.10 2.67 7.91 -52.49 -0.42 2.26 16 7 C 0.03 0.84 5.03 -17.45 -0.09 0.75 16 8 N -0.85 -21.97 10.97 55.50 0.61 -21.36 16 9 Si 0.92 19.61 29.62 -169.99 -5.03 14.57 16 10 H -0.27 -5.63 7.11 56.52 0.40 -5.22 16 11 H -0.28 -5.87 7.11 56.52 0.40 -5.47 16 12 H -0.27 -5.83 7.11 56.52 0.40 -5.43 16 13 C 0.49 12.37 6.74 -12.39 -0.08 12.28 16 14 O -0.57 -16.44 16.55 5.28 0.09 -16.35 16 15 C -0.17 -3.63 4.03 -104.82 -0.42 -4.05 16 16 C -0.04 -0.82 9.72 -38.85 -0.38 -1.20 16 17 C -0.20 -2.98 10.10 -39.50 -0.40 -3.38 16 18 C 0.09 1.36 11.17 -17.46 -0.20 1.17 16 19 N -0.51 -8.94 10.30 -16.53 -0.17 -9.11 16 20 C 0.10 1.83 5.68 -17.32 -0.10 1.73 16 21 H 0.06 1.20 6.47 -51.93 -0.34 0.86 16 22 H 0.06 0.96 7.34 -51.93 -0.38 0.58 16 23 H 0.07 1.24 8.14 -51.93 -0.42 0.82 16 24 H 0.14 3.39 5.05 -51.93 -0.26 3.13 16 25 H 0.05 1.04 8.14 -51.93 -0.42 0.62 16 26 H 0.08 1.30 5.59 -51.93 -0.29 1.01 16 27 H 0.10 2.00 3.03 -93.78 -0.28 1.72 16 28 H 0.27 6.55 8.31 -40.82 -0.34 6.21 16 29 H 0.14 2.49 7.75 -52.48 -0.41 2.09 16 30 H 0.13 1.47 8.06 -52.48 -0.42 1.05 16 31 H 0.15 1.66 8.06 -52.48 -0.42 1.24 16 32 H 0.22 4.10 0.68 -99.10 -0.07 4.03 16 LS Contribution 255.78 15.07 3.85 3.85 Total: -1.00 -30.06 255.78 -5.60 -35.66 By element: Atomic # 1 Polarization: 12.77 SS G_CDS: -3.27 Total: 9.50 kcal Atomic # 6 Polarization: -4.31 SS G_CDS: -1.40 Total: -5.70 kcal Atomic # 7 Polarization: -41.69 SS G_CDS: 0.16 Total: -41.53 kcal Atomic # 8 Polarization: -16.44 SS G_CDS: 0.09 Total: -16.35 kcal Atomic # 14 Polarization: 19.61 SS G_CDS: -5.03 Total: 14.57 kcal Total LS contribution 3.85 Total: 3.85 kcal Total: -30.06 -5.60 -35.66 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000057491640.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 150.599 kcal (2) G-P(sol) polarization free energy of solvation -30.059 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 120.540 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.597 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.655 kcal (6) G-S(sol) free energy of system = (1) + (5) 114.943 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds