Wall clock time and date at job start Mon Mar 30 2020 03:55:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 N 1.27771 * 119.05836 * 2 1 4 4 C 1.31609 * 124.67198 * 179.97438 * 3 2 1 5 5 C 1.38593 * 120.35079 * 359.77596 * 4 3 2 6 6 C 1.41216 * 118.31231 * 359.97438 * 5 4 3 7 7 C 1.40385 * 121.54416 * 180.16131 * 6 5 4 8 8 H 1.07998 * 120.00433 * 324.93119 * 7 6 5 9 9 C 1.40266 * 119.99618 * 144.93713 * 7 6 5 10 10 N 1.30676 * 120.00426 * 339.79373 * 9 7 6 11 11 Si 1.86800 * 119.99810 * 159.79564 * 9 7 6 12 12 H 1.48499 * 109.47217 * 359.97438 * 11 9 7 13 13 H 1.48503 * 109.47161 * 119.99955 * 11 9 7 14 14 H 1.48503 * 109.47206 * 239.99562 * 11 9 7 15 15 C 1.34875 * 119.06226 * 179.97438 * 2 1 3 16 16 O 1.21782 * 121.06377 * 0.20475 * 15 2 1 17 17 C 1.50259 * 123.13019 * 180.27481 * 5 4 3 18 18 C 1.52828 * 110.47024 * 342.87467 * 17 5 4 19 19 C 1.53310 * 108.37096 * 50.59815 * 18 17 5 20 20 C 1.50796 * 117.73552 * 179.68243 * 4 3 2 21 21 H 1.08994 * 109.47519 * 0.02562 * 1 2 3 22 22 H 1.09000 * 109.46787 * 120.00885 * 1 2 3 23 23 H 1.09001 * 109.46806 * 240.00369 * 1 2 3 24 24 H 0.96998 * 120.00710 * 180.02562 * 10 9 7 25 25 H 1.08999 * 109.30048 * 103.18289 * 17 5 4 26 26 H 1.08997 * 109.30539 * 222.77158 * 17 5 4 27 27 H 1.09006 * 109.67922 * 170.31036 * 18 17 5 28 28 H 1.08992 * 109.68618 * 290.87489 * 18 17 5 29 29 H 1.09005 * 109.62133 * 49.58920 * 19 18 17 30 30 H 1.08992 * 109.62240 * 170.15040 * 19 18 17 31 31 H 1.09007 * 109.27943 * 41.88691 * 20 4 3 32 32 H 1.08998 * 109.22024 * 282.40630 * 20 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.0856 1.1169 0.0000 4 6 3.3954 1.2456 0.0005 5 6 4.2093 0.1239 0.0057 6 6 3.5964 -1.1483 0.0110 7 6 4.3555 -2.3292 0.0199 8 1 5.2930 -2.3726 -0.5145 9 6 3.8961 -3.4528 0.7227 10 7 3.0063 -3.3127 1.6694 11 14 4.5565 -5.1497 0.3054 12 1 5.5462 -5.0386 -0.7961 13 1 5.2117 -5.7341 1.5031 14 1 3.4362 -6.0254 -0.1227 15 6 2.1202 -1.1789 0.0005 16 8 1.5136 -2.2349 -0.0027 17 6 5.7100 0.1982 0.0126 18 6 6.1781 1.5907 -0.4086 19 6 5.4258 2.6284 0.4326 20 6 3.9632 2.6425 -0.0070 21 1 -0.3634 1.0276 -0.0005 22 1 -0.3633 -0.5140 -0.8899 23 1 -0.3633 -0.5138 0.8900 24 1 2.6889 -4.0897 2.1557 25 1 6.0768 -0.0170 1.0162 26 1 6.1105 -0.5391 -0.6831 27 1 7.2502 1.6855 -0.2357 28 1 5.9608 1.7471 -1.4651 29 1 5.4884 2.3597 1.4871 30 1 5.8645 3.6138 0.2764 31 1 3.3885 3.2684 0.6759 32 1 3.8944 3.0525 -1.0146 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000077067347.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:55:45 Heat of formation + Delta-G solvation = 0.213988 kcal Electronic energy + Delta-G solvation = -16873.039268 eV Core-core repulsion = 14219.761724 eV Total energy + Delta-G solvation = -2653.277543 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 234.111 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -39.94420 -37.05291 -35.74489 -33.91072 -31.80455 -31.24456 -28.15309 -26.99085 -25.89494 -23.08992 -22.16415 -20.91130 -19.15102 -17.85420 -16.37031 -15.57212 -15.11909 -14.90848 -14.68526 -13.71723 -13.40667 -13.08368 -12.84670 -12.38305 -12.06205 -11.85296 -11.75382 -11.69036 -11.45966 -11.16226 -10.98276 -10.55290 -10.41819 -10.22645 -10.09174 -10.01069 -9.34909 -9.12655 -8.18463 -7.82798 -7.10130 -6.69171 -4.46202 2.37600 3.00680 3.07415 3.08779 3.39594 3.81446 3.89015 4.51236 5.26185 5.40995 5.54493 5.56139 5.67264 6.02448 6.05846 6.17086 6.23193 6.25333 6.31903 6.46316 6.53304 6.58069 6.70203 6.78050 6.83710 6.93015 7.09228 7.33451 7.50921 7.67627 7.93972 8.15061 8.44386 8.60526 9.48857 9.97334 10.12610 Molecular weight = 234.11amu Principal moments of inertia in cm(-1) A = 0.023693 B = 0.011391 C = 0.008068 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1181.498379 B = 2457.549820 C = 3469.535741 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.107 3.893 2 N -0.366 5.366 3 N -0.390 5.390 4 C 0.143 3.857 5 C -0.306 4.306 6 C 0.063 3.937 7 C -0.400 4.400 8 H 0.097 0.903 9 C 0.078 3.922 10 N -0.726 5.726 11 Si 0.914 3.086 12 H -0.256 1.256 13 H -0.272 1.272 14 H -0.269 1.269 15 C 0.476 3.524 16 O -0.538 6.538 17 C -0.027 4.027 18 C -0.117 4.117 19 C -0.111 4.111 20 C -0.043 4.043 21 H 0.078 0.922 22 H 0.058 0.942 23 H 0.061 0.939 24 H 0.288 0.712 25 H 0.048 0.952 26 H 0.051 0.949 27 H 0.051 0.949 28 H 0.056 0.944 29 H 0.062 0.938 30 H 0.056 0.944 31 H 0.066 0.934 32 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.897 5.361 -1.387 6.249 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.035 4.035 2 N -0.185 5.185 3 N -0.215 5.215 4 C -0.021 4.021 5 C -0.315 4.315 6 C 0.051 3.949 7 C -0.430 4.430 8 H 0.115 0.885 9 C -0.149 4.149 10 N -0.346 5.346 11 Si 0.738 3.262 12 H -0.180 1.180 13 H -0.197 1.197 14 H -0.194 1.194 15 C 0.271 3.729 16 O -0.415 6.415 17 C -0.065 4.065 18 C -0.155 4.155 19 C -0.149 4.149 20 C -0.082 4.082 21 H 0.097 0.903 22 H 0.077 0.923 23 H 0.079 0.921 24 H 0.099 0.901 25 H 0.066 0.934 26 H 0.070 0.930 27 H 0.070 0.930 28 H 0.075 0.925 29 H 0.081 0.919 30 H 0.075 0.925 31 H 0.084 0.916 32 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges 1.516 5.142 -1.197 5.493 hybrid contribution 0.603 -1.436 -0.088 1.560 sum 2.119 3.705 -1.285 4.458 Atomic orbital electron populations 1.21519 0.78074 1.02219 1.01730 1.45595 1.06717 1.02929 1.63228 1.70117 1.12076 1.11337 1.27960 1.20460 0.87761 0.94694 0.99169 1.19567 0.94790 0.91089 1.26054 1.19774 0.89079 0.93615 0.92451 1.19389 1.05388 0.94353 1.23850 0.88481 1.26031 0.93602 1.01772 0.93485 1.69643 1.18762 1.33908 1.12327 0.86155 0.79697 0.80695 0.79686 1.17980 1.19703 1.19359 1.20219 0.90139 0.83192 0.79387 1.90663 1.69738 1.29746 1.51353 1.19641 0.92736 0.94440 0.99648 1.21572 0.98116 0.96406 0.99377 1.21460 0.94886 0.98231 1.00313 1.19965 0.94905 0.92262 1.01058 0.90340 0.92318 0.92066 0.90077 0.93360 0.93032 0.92985 0.92529 0.91897 0.92506 0.91554 0.91619 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 2.14 10.25 59.85 0.61 2.76 16 2 N -0.37 -9.15 3.61 -68.04 -0.25 -9.40 16 3 N -0.39 -9.32 10.59 33.57 0.36 -8.96 16 4 C 0.14 3.25 6.69 -82.51 -0.55 2.69 16 5 C -0.31 -7.38 5.82 -103.57 -0.60 -7.98 16 6 C 0.06 1.71 5.57 -104.11 -0.58 1.13 16 7 C -0.40 -10.51 8.22 -38.01 -0.31 -10.82 16 8 H 0.10 2.37 6.81 -52.49 -0.36 2.01 16 9 C 0.08 2.01 4.66 -17.28 -0.08 1.92 16 10 N -0.73 -19.65 11.15 55.56 0.62 -19.03 16 11 Si 0.91 18.91 29.61 -169.99 -5.03 13.88 16 12 H -0.26 -5.11 7.11 56.52 0.40 -4.71 16 13 H -0.27 -5.36 7.11 56.52 0.40 -4.96 16 14 H -0.27 -5.66 7.11 56.52 0.40 -5.26 16 15 C 0.48 13.33 7.21 -12.37 -0.09 13.24 16 16 O -0.54 -16.00 14.29 5.12 0.07 -15.93 16 17 C -0.03 -0.55 5.11 -28.18 -0.14 -0.69 16 18 C -0.12 -1.90 5.99 -26.66 -0.16 -2.06 16 19 C -0.11 -1.71 5.95 -26.71 -0.16 -1.86 16 20 C -0.04 -0.75 5.92 -27.98 -0.17 -0.91 16 21 H 0.08 1.34 8.04 -51.93 -0.42 0.92 16 22 H 0.06 1.12 8.14 -51.93 -0.42 0.69 16 23 H 0.06 1.21 8.14 -51.93 -0.42 0.79 16 24 H 0.29 7.10 8.29 -40.82 -0.34 6.76 16 25 H 0.05 0.99 8.14 -51.93 -0.42 0.57 16 26 H 0.05 1.04 6.91 -51.93 -0.36 0.68 16 27 H 0.05 0.72 8.14 -51.93 -0.42 0.30 16 28 H 0.06 0.90 8.10 -51.93 -0.42 0.48 16 29 H 0.06 1.00 8.09 -51.93 -0.42 0.58 16 30 H 0.06 0.71 8.14 -51.93 -0.42 0.29 16 31 H 0.07 1.10 8.14 -51.92 -0.42 0.67 16 32 H 0.07 1.06 8.14 -51.93 -0.42 0.64 16 LS Contribution 265.20 15.07 4.00 4.00 Total: -1.00 -31.02 265.20 -6.53 -37.55 By element: Atomic # 1 Polarization: 4.54 SS G_CDS: -4.07 Total: 0.47 kcal Atomic # 6 Polarization: -0.35 SS G_CDS: -2.23 Total: -2.58 kcal Atomic # 7 Polarization: -38.12 SS G_CDS: 0.73 Total: -37.39 kcal Atomic # 8 Polarization: -16.00 SS G_CDS: 0.07 Total: -15.93 kcal Atomic # 14 Polarization: 18.91 SS G_CDS: -5.03 Total: 13.88 kcal Total LS contribution 4.00 Total: 4.00 kcal Total: -31.02 -6.53 -37.55 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000077067347.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.767 kcal (2) G-P(sol) polarization free energy of solvation -31.018 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.749 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.535 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.553 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.214 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds