Wall clock time and date at job start Mon Mar 30 2020 03:58:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.46502 * 119.99770 * 2 1 4 4 C 1.34769 * 119.99815 * 180.02562 * 2 1 3 5 5 O 1.21581 * 120.00616 * 359.97438 * 4 2 1 6 6 N 1.34779 * 119.99905 * 180.02562 * 4 2 1 7 7 C 1.39241 * 120.00489 * 184.27445 * 6 4 2 8 8 C 1.39484 * 119.83080 * 324.72660 * 7 6 4 9 9 C 1.36371 * 120.16900 * 180.24991 * 8 7 6 10 10 C 1.40872 * 119.82624 * 359.49977 * 9 8 7 11 11 C 1.41158 * 120.16235 * 180.22931 * 10 9 8 12 12 H 1.08007 * 119.99848 * 215.05509 * 11 10 9 13 13 C 1.39894 * 120.00332 * 35.05067 * 11 10 9 14 14 N 1.30884 * 119.99519 * 355.51675 * 13 11 10 15 15 Si 1.86797 * 120.00319 * 175.51268 * 13 11 10 16 16 H 1.48498 * 109.47225 * 89.99856 * 15 13 11 17 17 H 1.48490 * 109.47241 * 210.00207 * 15 13 11 18 18 H 1.48501 * 109.47117 * 330.00203 * 15 13 11 19 19 C 1.40868 * 119.67378 * 0.52078 * 10 9 8 20 20 C 1.36374 * 119.82768 * 359.73062 * 19 10 9 21 21 H 1.09003 * 109.47104 * 269.99706 * 1 2 3 22 22 H 1.09002 * 109.47365 * 29.99759 * 1 2 3 23 23 H 1.08999 * 109.47060 * 149.99873 * 1 2 3 24 24 H 1.08999 * 109.47514 * 269.99833 * 3 2 1 25 25 H 1.09001 * 109.47261 * 30.00501 * 3 2 1 26 26 H 1.09004 * 109.46685 * 149.99694 * 3 2 1 27 27 H 0.97003 * 120.00349 * 4.27882 * 6 4 2 28 28 H 1.08004 * 119.91862 * 359.97422 * 8 7 6 29 29 H 1.07999 * 120.08887 * 179.74526 * 9 8 7 30 30 H 0.97008 * 119.99722 * 180.02562 * 14 13 11 31 31 H 1.07995 * 120.08821 * 179.71283 * 19 10 9 32 32 H 1.07999 * 119.91511 * 179.97438 * 20 19 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2688 0.0000 4 6 2.1388 -1.1672 -0.0005 5 8 1.5310 -2.2201 -0.0005 6 7 3.4866 -1.1672 0.0000 7 6 4.1829 -2.3696 -0.0904 8 6 3.6742 -3.5139 0.5238 9 6 4.3530 -4.6939 0.4440 10 6 5.5657 -4.7577 -0.2701 11 6 6.2717 -5.9766 -0.3613 12 1 7.3518 -5.9759 -0.3686 13 6 5.5726 -7.1856 -0.4424 14 7 4.2674 -7.1945 -0.3453 15 14 6.5018 -8.7872 -0.6892 16 1 6.8524 -9.3650 0.6331 17 1 5.6479 -9.7446 -1.4370 18 1 7.7438 -8.5252 -1.4599 19 6 6.0734 -3.5977 -0.8873 20 6 5.3858 -2.4237 -0.7944 21 1 -0.3633 -0.0001 1.0277 22 1 -0.3634 0.8900 -0.5138 23 1 -0.3633 -0.8900 -0.5138 24 1 2.3792 1.5835 -1.0276 25 1 1.6084 2.0284 0.5139 26 1 3.1499 1.1384 0.5139 27 1 3.9717 -0.3295 0.0634 28 1 2.7425 -3.4643 1.0679 29 1 3.9600 -5.5782 0.9235 30 1 3.7826 -8.0329 -0.4011 31 1 7.0048 -3.6380 -1.4325 32 1 5.7740 -1.5334 -1.2668 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000094420358.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:58:19 Heat of formation + Delta-G solvation = 4.828943 kcal Electronic energy + Delta-G solvation = -15950.451438 eV Core-core repulsion = 13297.374014 eV Total energy + Delta-G solvation = -2653.077424 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 234.111 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -39.99580 -37.47886 -35.24159 -34.41673 -32.79301 -29.44771 -29.05061 -27.84705 -26.04178 -24.29577 -21.31053 -20.87436 -19.25592 -17.86216 -17.22064 -16.47259 -15.67561 -15.19939 -14.73630 -13.91557 -13.76737 -13.51008 -12.88631 -12.68949 -12.62900 -12.46148 -12.01254 -11.96875 -11.67056 -11.34578 -11.12268 -10.87408 -10.43560 -9.92580 -9.81797 -9.53473 -9.00745 -8.70971 -8.51046 -7.45017 -6.79675 -6.52642 -4.26417 2.73147 3.00188 3.11087 3.14704 3.16479 3.23114 3.73470 4.04060 4.35788 4.79350 4.98638 5.19707 5.32082 5.52603 5.63959 5.72314 5.88192 6.18803 6.43496 6.52039 6.86914 6.93867 7.11431 7.20054 7.34663 7.41204 7.71946 7.86068 8.08964 8.16202 8.35697 8.48952 8.74576 8.99741 9.00553 9.15893 10.38602 Molecular weight = 234.11amu Principal moments of inertia in cm(-1) A = 0.054103 B = 0.005607 C = 0.005171 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 517.411550 B = 4992.516737 C = 5413.530348 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.106 3.894 2 N -0.646 5.646 3 C 0.083 3.917 4 C 0.694 3.306 5 O -0.572 6.572 6 N -0.668 5.668 7 C 0.024 3.976 8 C -0.094 4.094 9 C -0.142 4.142 10 C 0.098 3.902 11 C -0.465 4.465 12 H 0.075 0.925 13 C 0.069 3.931 14 N -0.810 5.810 15 Si 0.914 3.086 16 H -0.270 1.270 17 H -0.278 1.278 18 H -0.264 1.264 19 C -0.203 4.203 20 C -0.117 4.117 21 H 0.047 0.953 22 H 0.063 0.937 23 H 0.076 0.924 24 H 0.052 0.948 25 H 0.070 0.930 26 H 0.065 0.935 27 H 0.390 0.610 28 H 0.108 0.892 29 H 0.130 0.870 30 H 0.277 0.723 31 H 0.096 0.904 32 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.024 12.536 0.869 12.925 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.037 4.037 2 N -0.386 5.386 3 C -0.061 4.061 4 C 0.396 3.604 5 O -0.448 6.448 6 N -0.316 5.316 7 C -0.069 4.069 8 C -0.114 4.114 9 C -0.163 4.163 10 C 0.095 3.905 11 C -0.496 4.496 12 H 0.093 0.907 13 C -0.146 4.146 14 N -0.437 5.437 15 Si 0.739 3.261 16 H -0.196 1.196 17 H -0.204 1.204 18 H -0.188 1.188 19 C -0.223 4.223 20 C -0.137 4.137 21 H 0.066 0.934 22 H 0.082 0.918 23 H 0.095 0.905 24 H 0.071 0.929 25 H 0.089 0.911 26 H 0.084 0.916 27 H 0.225 0.775 28 H 0.126 0.874 29 H 0.148 0.852 30 H 0.088 0.912 31 H 0.114 0.886 32 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -3.698 11.604 0.849 12.208 hybrid contribution 0.540 -0.143 -0.255 0.614 sum -3.158 11.461 0.595 11.903 Atomic orbital electron populations 1.21426 0.78288 1.02718 1.01272 1.46955 1.06830 1.04822 1.79979 1.21664 0.97023 0.85980 1.01464 1.15979 0.82251 0.83590 0.78573 1.90925 1.67602 1.29392 1.56925 1.42264 1.03937 1.08874 1.76492 1.17128 0.95844 0.85328 1.08607 1.20683 0.99080 0.92487 0.99197 1.21308 0.97407 0.96384 1.01156 1.17717 0.92240 0.91949 0.88545 1.19456 0.94406 0.90400 1.45314 0.90720 1.25879 0.94906 1.00829 0.92979 1.69803 1.07371 1.28482 1.38015 0.86217 0.80063 0.80726 0.79045 1.19579 1.20356 1.18807 1.20669 1.01869 0.93564 1.06194 1.20043 0.96003 0.97388 1.00298 0.93392 0.91796 0.90481 0.92903 0.91114 0.91619 0.77466 0.87357 0.85229 0.91152 0.88556 0.89264 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 1.27 10.44 59.85 0.62 1.89 16 2 N -0.65 -9.18 3.27 -195.33 -0.64 -9.82 16 3 C 0.08 0.78 10.24 59.85 0.61 1.39 16 4 C 0.69 13.49 8.11 -86.92 -0.71 12.79 16 5 O -0.57 -13.74 13.34 5.29 0.07 -13.67 16 6 N -0.67 -12.57 5.18 -14.10 -0.07 -12.64 16 7 C 0.02 0.55 6.31 -83.57 -0.53 0.02 16 8 C -0.09 -2.45 8.61 -39.79 -0.34 -2.79 16 9 C -0.14 -3.94 8.61 -39.26 -0.34 -4.28 16 10 C 0.10 2.69 5.55 -106.80 -0.59 2.10 16 11 C -0.46 -12.67 9.02 -37.85 -0.34 -13.01 16 12 H 0.07 1.93 7.85 -52.48 -0.41 1.52 16 13 C 0.07 1.81 5.42 -17.34 -0.09 1.72 16 14 N -0.81 -22.15 10.61 55.55 0.59 -21.56 16 15 Si 0.91 19.49 29.56 -169.99 -5.03 14.47 16 16 H -0.27 -5.64 7.11 56.52 0.40 -5.24 16 17 H -0.28 -5.85 7.11 56.52 0.40 -5.45 16 18 H -0.26 -5.53 7.11 56.52 0.40 -5.13 16 19 C -0.20 -5.02 9.74 -39.26 -0.38 -5.40 16 20 C -0.12 -2.63 9.90 -39.79 -0.39 -3.02 16 21 H 0.05 0.53 8.14 -51.93 -0.42 0.11 16 22 H 0.06 0.55 8.07 -51.93 -0.42 0.13 16 23 H 0.08 1.08 7.42 -51.93 -0.39 0.69 16 24 H 0.05 0.45 8.14 -51.93 -0.42 0.03 16 25 H 0.07 0.49 8.07 -51.93 -0.42 0.08 16 26 H 0.07 0.58 6.30 -51.93 -0.33 0.25 16 27 H 0.39 5.75 6.51 -40.82 -0.27 5.48 16 28 H 0.11 2.86 6.22 -52.48 -0.33 2.53 16 29 H 0.13 3.74 6.15 -52.49 -0.32 3.42 16 30 H 0.28 6.97 8.30 -40.82 -0.34 6.64 16 31 H 0.10 2.20 8.06 -52.49 -0.42 1.78 16 32 H 0.09 1.69 8.06 -52.49 -0.42 1.27 16 LS Contribution 272.53 15.07 4.11 4.11 Total: -1.00 -32.45 272.53 -7.15 -39.61 By element: Atomic # 1 Polarization: 11.81 SS G_CDS: -3.70 Total: 8.10 kcal Atomic # 6 Polarization: -6.11 SS G_CDS: -2.48 Total: -8.59 kcal Atomic # 7 Polarization: -43.91 SS G_CDS: -0.12 Total: -44.03 kcal Atomic # 8 Polarization: -13.74 SS G_CDS: 0.07 Total: -13.67 kcal Atomic # 14 Polarization: 19.49 SS G_CDS: -5.03 Total: 14.47 kcal Total LS contribution 4.11 Total: 4.11 kcal Total: -32.45 -7.15 -39.61 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000094420358.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.437 kcal (2) G-P(sol) polarization free energy of solvation -32.454 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.983 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.154 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.608 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.829 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds