Wall clock time and date at job start Mon Mar 30 2020 03:56:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46893 * 111.00186 * 2 1 4 4 C 1.50699 * 109.47434 * 66.04745 * 3 2 1 5 5 O 1.21430 * 120.00172 * 359.97438 * 4 3 2 6 6 C 1.41032 * 120.00123 * 180.02562 * 4 3 2 7 7 H 1.08001 * 119.99511 * 359.97438 * 6 4 3 8 8 C 1.40457 * 119.99875 * 180.02562 * 6 4 3 9 9 N 1.30520 * 120.00305 * 359.97438 * 8 6 4 10 10 Si 1.86796 * 119.99730 * 179.97438 * 8 6 4 11 11 H 1.48500 * 109.47202 * 59.99733 * 10 8 6 12 12 H 1.48499 * 109.47134 * 179.97438 * 10 8 6 13 13 H 1.48497 * 109.47291 * 299.99507 * 10 8 6 14 14 C 1.46900 * 111.00163 * 236.04118 * 2 1 3 15 15 C 1.50703 * 109.47016 * 293.96230 * 14 2 1 16 16 C 1.38223 * 119.62264 * 95.01930 * 15 14 2 17 17 C 1.38628 * 119.16031 * 179.97438 * 16 15 14 18 18 C 1.38672 * 118.42475 * 359.97438 * 17 16 15 19 19 C 1.38186 * 119.15778 * 0.02562 * 18 17 16 20 20 N 1.31856 * 119.61279 * 274.99401 * 15 14 2 21 21 H 1.08997 * 109.47150 * 183.95677 * 1 2 3 22 22 H 1.09008 * 109.47178 * 303.95974 * 1 2 3 23 23 H 1.09003 * 109.46703 * 63.95248 * 1 2 3 24 24 H 1.09002 * 109.47096 * 186.04500 * 3 2 1 25 25 H 1.09000 * 109.47351 * 306.03946 * 3 2 1 26 26 H 0.96993 * 120.00388 * 179.97438 * 9 8 6 27 27 H 1.08989 * 109.47527 * 173.95770 * 14 2 1 28 28 H 1.08996 * 109.46581 * 53.95340 * 14 2 1 29 29 H 1.07995 * 120.41821 * 359.95030 * 16 15 14 30 30 H 1.08006 * 120.78822 * 180.02562 * 17 16 15 31 31 H 1.07993 * 120.42192 * 179.97438 * 18 17 16 32 32 H 1.08001 * 119.60956 * 180.27218 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3713 0.0000 4 6 1.6370 2.0471 1.2984 5 8 1.0040 1.4450 2.1418 6 6 2.0359 3.3792 1.5337 7 1 2.5985 3.9149 0.7834 8 6 1.7022 4.0088 2.7441 9 7 1.0227 3.3613 3.6510 10 14 2.2311 5.7730 3.0559 11 1 1.6431 6.6570 2.0177 12 1 1.7579 6.2020 4.3965 13 1 3.7124 5.8628 3.0013 14 6 1.9955 -0.7661 -1.1375 15 6 1.6368 -2.2205 -0.9727 16 6 0.5019 -2.7179 -1.5851 17 6 0.1812 -4.0574 -1.4276 18 6 1.0182 -4.8502 -0.6570 19 6 2.1358 -4.2826 -0.0753 20 7 2.4096 -3.0039 -0.2464 21 1 -0.3633 -1.0252 0.0709 22 1 -0.3634 0.5741 0.8524 23 1 -0.3633 0.4513 -0.9233 24 1 3.0798 1.3443 -0.1082 25 1 1.5613 1.9273 -0.8310 26 1 0.7926 3.7959 4.4870 27 1 3.0797 -0.6613 -1.1755 28 1 1.5611 -0.3874 -2.0627 29 1 -0.1274 -2.0711 -2.1785 30 1 -0.6991 -4.4737 -1.8947 31 1 0.7989 -5.8977 -0.5125 32 1 2.7951 -4.8944 0.5226 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259108869.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:56:19 Heat of formation + Delta-G solvation = 6.028969 kcal Electronic energy + Delta-G solvation = -15847.796652 eV Core-core repulsion = 13194.771265 eV Total energy + Delta-G solvation = -2653.025387 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 234.111 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -40.08252 -37.52070 -35.40571 -32.57609 -32.34331 -31.41360 -28.18794 -26.98082 -25.84880 -23.40739 -22.86617 -20.93031 -19.14919 -16.77685 -16.25158 -16.09277 -15.50257 -15.09717 -14.93658 -14.35318 -13.83883 -13.42679 -13.15284 -12.86177 -12.63422 -12.37189 -12.04496 -11.57445 -11.36594 -11.14182 -11.07876 -10.75122 -10.31842 -10.18584 -10.10753 -9.75049 -9.22271 -8.89944 -8.82635 -7.68085 -7.13533 -6.12517 -4.82030 1.20996 1.40299 3.10974 3.17075 3.19126 3.87386 4.08080 4.32124 4.45495 4.72948 4.89272 4.96777 5.12373 5.23348 5.50294 5.61051 5.63085 5.79461 5.97176 6.05535 6.10291 6.21781 6.23805 6.46656 6.55924 6.79551 6.80506 6.92327 7.31685 7.73243 7.83135 8.13625 8.22660 8.90558 8.98404 10.43947 10.68598 Molecular weight = 234.11amu Principal moments of inertia in cm(-1) A = 0.059105 B = 0.004988 C = 0.004941 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 473.619929 B = 5612.509561 C = 5665.331339 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.511 5.511 3 C 0.017 3.983 4 C 0.369 3.631 5 O -0.524 6.524 6 C -0.540 4.540 7 H 0.067 0.933 8 C 0.085 3.915 9 N -0.742 5.742 10 Si 0.904 3.096 11 H -0.266 1.266 12 H -0.279 1.279 13 H -0.266 1.266 14 C 0.097 3.903 15 C 0.153 3.847 16 C -0.169 4.169 17 C -0.078 4.078 18 C -0.185 4.185 19 C 0.100 3.900 20 N -0.465 5.465 21 H 0.050 0.950 22 H 0.098 0.902 23 H 0.008 0.992 24 H 0.076 0.924 25 H 0.033 0.967 26 H 0.272 0.728 27 H 0.087 0.913 28 H 0.041 0.959 29 H 0.130 0.870 30 H 0.130 0.870 31 H 0.130 0.870 32 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.695 -10.073 -9.869 14.119 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 N -0.235 5.235 3 C -0.112 4.112 4 C 0.262 3.738 5 O -0.411 6.411 6 C -0.572 4.572 7 H 0.085 0.915 8 C -0.138 4.138 9 N -0.371 5.371 10 Si 0.729 3.271 11 H -0.191 1.191 12 H -0.204 1.204 13 H -0.190 1.190 14 C -0.032 4.032 15 C 0.014 3.986 16 C -0.190 4.190 17 C -0.104 4.104 18 C -0.205 4.205 19 C -0.058 4.058 20 N -0.174 5.174 21 H 0.069 0.931 22 H 0.116 0.884 23 H 0.026 0.974 24 H 0.094 0.906 25 H 0.052 0.948 26 H 0.083 0.917 27 H 0.106 0.894 28 H 0.059 0.941 29 H 0.148 0.852 30 H 0.148 0.852 31 H 0.148 0.852 32 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -0.187 -10.277 -8.481 13.326 hybrid contribution -0.715 0.867 -1.157 1.613 sum -0.902 -9.410 -9.638 13.500 Atomic orbital electron populations 1.22541 0.87441 1.01122 1.01191 1.61710 1.08103 1.14460 1.39203 1.22721 0.99645 0.86890 1.01914 1.19379 0.81554 0.87684 0.85225 1.90369 1.38781 1.66356 1.45571 1.20703 1.34943 0.99512 1.02049 0.91504 1.25956 0.93154 0.99207 0.95473 1.69942 1.25744 1.36452 1.04957 0.86481 0.79944 0.82663 0.78043 1.19121 1.20420 1.19023 1.21054 1.01382 0.87821 0.92925 1.21224 0.90451 0.95922 0.90990 1.21999 0.98421 0.96242 1.02327 1.21508 0.98686 0.93652 0.96585 1.22083 0.97032 1.01144 1.00220 1.22786 0.95227 0.91286 0.96482 1.67530 1.31509 1.04793 1.13558 0.93136 0.88367 0.97362 0.90609 0.94845 0.91673 0.89433 0.94060 0.85188 0.85179 0.85175 0.82983 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.52 8.84 60.07 0.53 1.05 16 2 N -0.51 -11.02 4.49 -245.83 -1.10 -12.13 16 3 C 0.02 0.38 5.32 -4.98 -0.03 0.35 16 4 C 0.37 10.44 6.60 -33.25 -0.22 10.22 16 5 O -0.52 -16.61 12.85 5.43 0.07 -16.54 16 6 C -0.54 -15.11 9.22 -37.69 -0.35 -15.46 16 7 H 0.07 1.72 7.85 -52.49 -0.41 1.30 16 8 C 0.08 2.33 5.50 -17.27 -0.10 2.23 16 9 N -0.74 -21.77 11.72 55.57 0.65 -21.12 16 10 Si 0.90 19.71 29.56 -169.99 -5.03 14.68 16 11 H -0.27 -5.64 7.11 56.52 0.40 -5.24 16 12 H -0.28 -5.92 7.11 56.52 0.40 -5.52 16 13 H -0.27 -5.66 7.11 56.52 0.40 -5.26 16 14 C 0.10 1.68 5.29 -4.97 -0.03 1.65 16 15 C 0.15 2.53 5.64 -82.59 -0.47 2.06 16 16 C -0.17 -2.31 8.36 -39.44 -0.33 -2.64 16 17 C -0.08 -0.91 10.18 -39.28 -0.40 -1.30 16 18 C -0.18 -2.11 10.11 -39.44 -0.40 -2.50 16 19 C 0.10 1.36 11.18 -17.55 -0.20 1.16 16 20 N -0.46 -8.04 10.27 -9.47 -0.10 -8.13 16 21 H 0.05 0.96 6.40 -51.93 -0.33 0.63 16 22 H 0.10 2.41 5.82 -51.92 -0.30 2.11 16 23 H 0.01 0.15 8.14 -51.93 -0.42 -0.28 16 24 H 0.08 1.63 7.93 -51.93 -0.41 1.21 16 25 H 0.03 0.71 8.12 -51.93 -0.42 0.29 16 26 H 0.27 7.22 8.29 -40.82 -0.34 6.88 16 27 H 0.09 1.49 7.93 -51.93 -0.41 1.08 16 28 H 0.04 0.63 8.02 -51.93 -0.42 0.21 16 29 H 0.13 1.54 8.06 -52.49 -0.42 1.12 16 30 H 0.13 1.10 8.06 -52.48 -0.42 0.68 16 31 H 0.13 1.07 8.06 -52.49 -0.42 0.64 16 32 H 0.15 1.64 8.06 -52.49 -0.42 1.22 16 LS Contribution 277.21 15.07 4.18 4.18 Total: -1.00 -33.92 277.21 -7.26 -41.17 By element: Atomic # 1 Polarization: 5.03 SS G_CDS: -3.96 Total: 1.08 kcal Atomic # 6 Polarization: -1.21 SS G_CDS: -1.97 Total: -3.19 kcal Atomic # 7 Polarization: -40.83 SS G_CDS: -0.55 Total: -41.38 kcal Atomic # 8 Polarization: -16.61 SS G_CDS: 0.07 Total: -16.54 kcal Atomic # 14 Polarization: 19.71 SS G_CDS: -5.03 Total: 14.68 kcal Total LS contribution 4.18 Total: 4.18 kcal Total: -33.92 -7.26 -41.17 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259108869.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.203 kcal (2) G-P(sol) polarization free energy of solvation -33.915 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.288 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.259 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.174 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.029 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds