Wall clock time and date at job start Mon Mar 30 2020 03:44:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 H 1.09001 * 109.46801 * 2 1 4 4 C 1.52999 * 109.46623 * 119.99792 * 2 1 3 5 5 C 1.50700 * 109.47526 * 294.99769 * 4 2 1 6 6 O 1.21291 * 119.99692 * 0.02562 * 5 4 2 7 7 N 1.34774 * 119.99911 * 180.02562 * 5 4 2 8 8 C 1.37098 * 119.99819 * 180.02562 * 7 5 4 9 9 H 1.08006 * 119.99951 * 359.97438 * 8 7 5 10 10 C 1.38953 * 120.00107 * 179.97438 * 8 7 5 11 11 N 1.31411 * 120.00092 * 0.02562 * 10 8 7 12 12 Si 1.86801 * 120.00020 * 180.02562 * 10 8 7 13 13 H 1.48505 * 109.47062 * 359.97438 * 12 10 8 14 14 H 1.48492 * 109.46971 * 120.00031 * 12 10 8 15 15 H 1.48503 * 109.47111 * 240.00150 * 12 10 8 16 16 C 1.50698 * 109.47184 * 239.99558 * 2 1 3 17 17 C 1.38671 * 120.41452 * 119.99991 * 16 2 1 18 18 C 1.38626 * 118.42012 * 180.02562 * 17 16 2 19 19 C 1.38234 * 119.16099 * 0.02562 * 18 17 16 20 20 N 1.31844 * 120.76134 * 359.97438 * 19 18 17 21 21 C 1.31887 * 121.72803 * 359.70631 * 20 19 18 22 22 H 1.09001 * 109.47002 * 59.99846 * 1 2 3 23 23 H 1.08993 * 109.46955 * 180.02562 * 1 2 3 24 24 H 1.09000 * 109.47050 * 300.00112 * 1 2 3 25 25 H 1.09001 * 109.47317 * 55.00458 * 4 2 1 26 26 H 1.09007 * 109.46669 * 175.00116 * 4 2 1 27 27 H 0.97000 * 120.00167 * 0.02562 * 7 5 4 28 28 H 0.96990 * 120.00052 * 180.02562 * 11 10 8 29 29 H 1.08006 * 120.79168 * 359.97438 * 17 16 2 30 30 H 1.08003 * 120.42446 * 180.02562 * 18 17 16 31 31 H 1.07996 * 119.61777 * 179.97438 * 19 18 17 32 32 H 1.08006 * 119.62010 * 180.30975 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0399 -0.7212 1.2493 5 6 1.6413 0.0571 2.4766 6 8 1.0109 1.0871 2.3633 7 7 1.9852 -0.3914 3.7001 8 6 1.6221 0.3164 4.8167 9 1 1.0608 1.2336 4.7158 10 6 1.9762 -0.1462 6.0782 11 7 2.6597 -1.2619 6.2010 12 14 1.4809 0.8179 7.5996 13 1 0.7237 2.0291 7.1933 14 1 0.6272 -0.0320 8.4679 15 1 2.6984 1.2234 8.3469 16 6 2.0324 -0.7105 -1.2304 17 6 2.8302 -0.0449 -2.1489 18 6 3.2688 -0.7382 -3.2663 19 6 2.8986 -2.0603 -3.4271 20 7 2.1385 -2.6612 -2.5329 21 6 1.7082 -2.0348 -1.4550 22 1 -0.3633 0.5139 -0.8900 23 1 -0.3633 -1.0276 0.0005 24 1 -0.3633 0.5139 0.8900 25 1 1.6053 -1.7198 1.2952 26 1 3.1263 -0.7994 1.2057 27 1 2.4897 -1.2149 3.7907 28 1 2.9065 -1.5849 7.0816 29 1 3.1026 0.9892 -1.9976 30 1 3.8919 -0.2515 -4.0021 31 1 3.2358 -2.6072 -4.2951 32 1 1.0912 -2.5616 -0.7420 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000339923507.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:44:56 Heat of formation + Delta-G solvation = -19.946145 kcal Electronic energy + Delta-G solvation = -15709.555090 eV Core-core repulsion = 13055.403338 eV Total energy + Delta-G solvation = -2654.151752 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 234.111 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -40.27605 -38.37647 -35.27620 -33.81477 -32.17433 -31.26022 -29.91229 -27.54561 -24.77553 -23.85899 -23.38285 -20.58764 -18.96734 -17.82536 -17.16205 -16.36329 -15.86919 -14.83713 -14.56595 -14.39141 -14.08539 -13.80304 -13.54675 -13.02565 -12.98560 -12.51868 -12.32603 -11.70860 -11.48780 -11.15685 -10.94317 -10.83353 -10.50719 -10.35341 -10.22747 -9.75811 -9.51772 -9.37359 -8.89634 -8.33606 -7.97631 -6.43140 -3.84125 1.13690 1.30787 3.15199 3.26036 3.32990 3.83314 3.89599 4.16106 4.43989 4.73700 4.82307 4.99314 5.08537 5.21161 5.23263 5.32868 5.51001 5.63617 5.70838 5.92230 6.04947 6.09443 6.10535 6.23336 6.30468 6.48774 6.64397 6.72674 6.87174 7.54059 7.99087 8.04660 8.59140 9.16106 9.53477 10.04242 10.74552 Molecular weight = 234.11amu Principal moments of inertia in cm(-1) A = 0.053527 B = 0.004847 C = 0.004684 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 522.976890 B = 5775.283716 C = 5975.800069 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.028 4.028 3 H 0.086 0.914 4 C -0.124 4.124 5 C 0.441 3.559 6 O -0.593 6.593 7 N -0.562 5.562 8 C -0.301 4.301 9 H 0.104 0.896 10 C 0.023 3.977 11 N -0.900 5.900 12 Si 0.929 3.071 13 H -0.268 1.268 14 H -0.281 1.281 15 H -0.282 1.282 16 C -0.116 4.116 17 C -0.076 4.076 18 C -0.173 4.173 19 C 0.082 3.918 20 N -0.485 5.485 21 C 0.101 3.899 22 H 0.045 0.955 23 H 0.046 0.954 24 H 0.090 0.910 25 H 0.078 0.922 26 H 0.076 0.924 27 H 0.393 0.607 28 H 0.271 0.729 29 H 0.134 0.866 30 H 0.131 0.869 31 H 0.151 0.849 32 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.303 -1.129 -14.358 14.461 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.047 4.047 3 H 0.104 0.896 4 C -0.165 4.165 5 C 0.228 3.772 6 O -0.480 6.480 7 N -0.197 5.197 8 C -0.431 4.431 9 H 0.122 0.878 10 C -0.179 4.179 11 N -0.542 5.542 12 Si 0.756 3.244 13 H -0.192 1.192 14 H -0.207 1.207 15 H -0.208 1.208 16 C -0.118 4.118 17 C -0.102 4.102 18 C -0.193 4.193 19 C -0.074 4.074 20 N -0.194 5.194 21 C -0.055 4.055 22 H 0.064 0.936 23 H 0.065 0.935 24 H 0.109 0.891 25 H 0.097 0.903 26 H 0.095 0.905 27 H 0.226 0.774 28 H 0.081 0.919 29 H 0.151 0.849 30 H 0.149 0.851 31 H 0.168 0.832 32 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 0.718 -1.421 -14.381 14.468 hybrid contribution 0.504 0.740 0.974 1.323 sum 1.222 -0.681 -13.406 13.479 Atomic orbital electron populations 1.21949 0.93616 1.01476 1.03286 1.19792 0.96807 0.99059 0.89076 0.89559 1.21572 1.01623 0.99739 0.93568 1.19846 0.85334 0.87720 0.84328 1.90473 1.44827 1.26335 1.86329 1.41934 1.49051 1.24109 1.04640 1.19774 1.32908 1.06996 0.83381 0.87829 1.25276 0.96829 0.96513 0.99305 1.69619 1.38540 1.21034 1.24977 0.85810 0.78272 0.79505 0.80818 1.19212 1.20725 1.20755 1.21137 0.97476 0.95673 0.97501 1.21581 0.95123 1.00354 0.93161 1.22114 1.01934 0.96275 0.98943 1.22690 0.94656 0.92422 0.97679 1.67679 1.10167 1.38866 1.02644 1.22677 0.96979 0.91662 0.94221 0.93628 0.93458 0.89147 0.90311 0.90524 0.77389 0.91883 0.84861 0.85082 0.83180 0.82798 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.28 8.75 37.16 0.33 -1.95 16 2 C -0.03 -0.43 2.23 -91.77 -0.20 -0.63 16 3 H 0.09 1.41 7.74 -51.93 -0.40 1.01 16 4 C -0.12 -2.14 4.92 -27.88 -0.14 -2.27 16 5 C 0.44 10.09 7.50 -10.99 -0.08 10.01 16 6 O -0.59 -15.26 13.54 5.55 0.08 -15.19 16 7 N -0.56 -14.12 5.29 -10.96 -0.06 -14.18 16 8 C -0.30 -8.32 9.68 -14.93 -0.14 -8.46 16 9 H 0.10 2.99 7.16 -52.48 -0.38 2.62 16 10 C 0.02 0.60 5.50 -17.47 -0.10 0.50 16 11 N -0.90 -24.49 13.05 55.50 0.72 -23.77 16 12 Si 0.93 20.91 29.55 -169.99 -5.02 15.88 16 13 H -0.27 -6.02 7.11 56.52 0.40 -5.61 16 14 H -0.28 -6.24 7.11 56.52 0.40 -5.83 16 15 H -0.28 -6.25 7.11 56.52 0.40 -5.84 16 16 C -0.12 -1.57 4.79 -104.48 -0.50 -2.07 16 17 C -0.08 -0.91 9.81 -39.28 -0.39 -1.29 16 18 C -0.17 -1.80 10.11 -39.44 -0.40 -2.20 16 19 C 0.08 0.93 11.18 -17.55 -0.20 0.74 16 20 N -0.49 -6.69 10.36 -13.25 -0.14 -6.82 16 21 C 0.10 1.38 9.95 -17.55 -0.17 1.21 16 22 H 0.04 0.64 8.14 -51.93 -0.42 0.21 16 23 H 0.05 0.67 7.43 -51.93 -0.39 0.28 16 24 H 0.09 1.70 5.95 -51.93 -0.31 1.39 16 25 H 0.08 1.23 7.58 -51.93 -0.39 0.83 16 26 H 0.08 1.23 8.14 -51.93 -0.42 0.81 16 27 H 0.39 9.53 7.90 -40.82 -0.32 9.21 16 28 H 0.27 6.96 8.31 -40.82 -0.34 6.62 16 29 H 0.13 1.37 8.00 -52.48 -0.42 0.95 16 30 H 0.13 0.98 8.06 -52.48 -0.42 0.56 16 31 H 0.15 1.25 8.06 -52.49 -0.42 0.83 16 32 H 0.15 1.94 7.19 -52.48 -0.38 1.56 16 LS Contribution 277.19 15.07 4.18 4.18 Total: -1.00 -30.67 277.19 -6.05 -36.72 By element: Atomic # 1 Polarization: 13.41 SS G_CDS: -3.81 Total: 9.59 kcal Atomic # 6 Polarization: -4.42 SS G_CDS: -1.99 Total: -6.42 kcal Atomic # 7 Polarization: -45.30 SS G_CDS: 0.53 Total: -44.77 kcal Atomic # 8 Polarization: -15.26 SS G_CDS: 0.08 Total: -15.19 kcal Atomic # 14 Polarization: 20.91 SS G_CDS: -5.02 Total: 15.88 kcal Total LS contribution 4.18 Total: 4.18 kcal Total: -30.67 -6.05 -36.72 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000339923507.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.776 kcal (2) G-P(sol) polarization free energy of solvation -30.674 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.898 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.048 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.722 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.946 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds