Wall clock time and date at job start Mon Mar 30 2020 03:49:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.27956 * 119.99781 * 2 1 4 4 O 1.41599 * 120.00073 * 0.02562 * 3 2 1 5 5 C 1.50699 * 119.99898 * 179.97438 * 2 1 3 6 6 H 1.09002 * 109.47354 * 325.00068 * 5 2 1 7 7 N 1.46509 * 109.47030 * 205.00128 * 5 2 1 8 8 C 1.36935 * 120.00055 * 84.99968 * 7 5 2 9 9 H 1.08003 * 119.99615 * 0.02562 * 8 7 5 10 10 C 1.38807 * 119.99849 * 180.02562 * 8 7 5 11 11 N 1.31612 * 120.00171 * 359.97438 * 10 8 7 12 12 Si 1.86800 * 119.99999 * 180.02562 * 10 8 7 13 13 H 1.48507 * 109.46949 * 359.97438 * 12 10 8 14 14 H 1.48502 * 109.47577 * 119.99651 * 12 10 8 15 15 H 1.48504 * 109.47324 * 239.99967 * 12 10 8 16 16 C 1.50697 * 109.47139 * 85.00131 * 5 2 1 17 17 C 1.38238 * 120.00171 * 79.72573 * 16 5 2 18 18 C 1.38229 * 120.00286 * 179.78540 * 17 16 5 19 19 C 1.38235 * 119.99675 * 0.44613 * 18 17 16 20 20 C 1.38235 * 120.00350 * 359.80612 * 19 18 17 21 21 C 1.38237 * 119.99827 * 259.99614 * 16 5 2 22 22 H 1.09002 * 109.47152 * 89.99947 * 1 2 3 23 23 H 1.09001 * 109.46980 * 330.00047 * 1 2 3 24 24 H 1.09004 * 109.47113 * 210.00028 * 1 2 3 25 25 H 0.96703 * 113.99807 * 180.02562 * 4 3 2 26 26 H 0.96998 * 119.99346 * 265.00168 * 7 5 2 27 27 H 0.97003 * 120.00044 * 180.02562 * 11 10 8 28 28 H 1.08003 * 119.99460 * 359.97438 * 17 16 5 29 29 H 1.08000 * 120.00389 * 180.26972 * 18 17 16 30 30 H 1.08007 * 120.00197 * 179.82991 * 19 18 17 31 31 H 1.08001 * 120.00362 * 180.02562 * 20 19 18 32 32 H 1.07992 * 119.99910 * 359.97438 * 21 16 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1468 1.1082 0.0000 4 8 1.4387 2.3344 0.0005 5 6 2.2605 -1.3051 0.0006 6 1 1.7131 -2.0404 0.5903 7 7 3.5888 -1.1018 0.5843 8 6 3.7555 -1.1560 1.9424 9 1 2.9078 -1.3490 2.5832 10 6 5.0139 -0.9629 2.4954 11 7 6.0470 -0.7282 1.7144 12 14 5.2415 -1.0375 4.3480 13 1 3.9344 -1.3138 4.9965 14 1 6.2008 -2.1196 4.6858 15 1 5.7700 0.2623 4.8345 16 6 2.4044 -1.8027 -1.4146 17 6 3.3807 -1.2730 -2.2376 18 6 3.5157 -1.7325 -3.5342 19 6 2.6683 -2.7152 -4.0109 20 6 1.6887 -3.2412 -3.1896 21 6 1.5566 -2.7848 -1.8915 22 1 -0.3633 0.0000 -1.0277 23 1 -0.3633 0.8900 0.5138 24 1 -0.3633 -0.8900 0.5139 25 1 2.0072 3.1168 0.0001 26 1 4.3501 -0.9289 0.0086 27 1 6.9265 -0.5937 2.1009 28 1 4.0400 -0.5023 -1.8664 29 1 4.2812 -1.3218 -4.1758 30 1 2.7719 -3.0724 -5.0249 31 1 1.0269 -4.0093 -3.5619 32 1 0.7913 -3.1958 -1.2498 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000394719110.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:49:36 Heat of formation + Delta-G solvation = 46.201438 kcal Electronic energy + Delta-G solvation = -16178.698381 eV Core-core repulsion = 13527.415003 eV Total energy + Delta-G solvation = -2651.283378 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 234.111 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -39.13521 -36.93229 -35.07309 -32.92534 -31.37106 -30.58727 -29.63453 -27.68071 -25.66025 -23.15650 -22.01803 -21.20992 -18.67783 -17.49009 -16.27564 -16.16585 -15.26906 -14.90163 -14.57100 -14.10630 -13.79905 -13.36784 -13.29031 -13.00532 -12.71777 -12.36702 -12.05950 -11.75564 -11.70654 -11.02974 -10.87856 -10.71420 -10.61224 -10.09102 -9.79962 -9.19625 -8.99356 -8.80953 -8.55648 -8.33324 -7.05926 -5.79593 -3.08933 1.68460 1.77034 2.84491 3.42214 3.48010 3.50058 3.79665 4.20786 4.55366 5.08968 5.22246 5.27714 5.35349 5.49888 5.64241 5.69027 5.80154 5.86411 5.90765 6.09888 6.11835 6.19408 6.34025 6.46686 6.66336 6.78419 6.86902 7.08045 7.35648 7.45485 7.67152 8.35363 8.52853 9.49711 10.00667 10.37263 11.42402 Molecular weight = 234.11amu Principal moments of inertia in cm(-1) A = 0.021076 B = 0.008632 C = 0.007168 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1328.200654 B = 3242.958390 C = 3905.392230 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C 0.102 3.898 3 N -0.294 5.294 4 O -0.442 6.442 5 C 0.266 3.734 6 H 0.082 0.918 7 N -0.700 5.700 8 C -0.242 4.242 9 H 0.071 0.929 10 C -0.006 4.006 11 N -0.926 5.926 12 Si 0.907 3.093 13 H -0.280 1.280 14 H -0.291 1.291 15 H -0.291 1.291 16 C -0.068 4.068 17 C -0.095 4.095 18 C -0.123 4.123 19 C -0.130 4.130 20 C -0.127 4.127 21 C -0.113 4.113 22 H 0.071 0.929 23 H 0.067 0.933 24 H 0.069 0.931 25 H 0.394 0.606 26 H 0.390 0.610 27 H 0.255 0.745 28 H 0.128 0.872 29 H 0.118 0.882 30 H 0.115 0.885 31 H 0.117 0.883 32 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.201 -1.920 -8.921 12.959 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.096 4.096 3 N -0.038 5.038 4 O -0.345 6.345 5 C 0.152 3.848 6 H 0.100 0.900 7 N -0.339 5.339 8 C -0.373 4.373 9 H 0.089 0.911 10 C -0.203 4.203 11 N -0.573 5.573 12 Si 0.738 3.262 13 H -0.205 1.205 14 H -0.218 1.218 15 H -0.219 1.219 16 C -0.070 4.070 17 C -0.113 4.113 18 C -0.141 4.141 19 C -0.149 4.149 20 C -0.145 4.145 21 C -0.132 4.132 22 H 0.089 0.911 23 H 0.086 0.914 24 H 0.088 0.912 25 H 0.240 0.760 26 H 0.226 0.774 27 H 0.065 0.935 28 H 0.146 0.854 29 H 0.136 0.864 30 H 0.133 0.867 31 H 0.135 0.865 32 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -8.810 -1.851 -8.690 12.512 hybrid contribution 0.014 0.509 0.905 1.039 sum -8.796 -1.342 -7.785 11.823 Atomic orbital electron populations 1.21233 0.93726 1.02992 1.02404 1.26799 0.94260 0.95536 0.93049 1.76562 1.22499 0.90967 1.13785 1.88318 1.35908 1.14415 1.95846 1.18068 0.88617 0.88604 0.89487 0.90018 1.42405 1.02637 1.83996 1.04891 1.19231 0.93767 1.41492 0.82780 0.91089 1.24725 0.95660 1.02108 0.97765 1.69674 0.99272 1.54771 1.33555 0.86127 0.77571 0.77189 0.85311 1.20524 1.21773 1.21850 1.20062 0.95481 0.95976 0.95505 1.21117 0.97505 0.99524 0.93183 1.21114 0.99353 0.97668 0.95949 1.21047 0.96499 0.97849 0.99459 1.21011 0.98889 1.00330 0.94231 1.20995 0.99249 0.97204 0.95767 0.91067 0.91385 0.91202 0.75964 0.77416 0.93465 0.85440 0.86444 0.86738 0.86539 0.86114 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.28 9.76 36.01 0.35 -1.93 16 2 C 0.10 2.01 6.27 -78.93 -0.49 1.51 16 3 N -0.29 -6.31 11.51 35.58 0.41 -5.90 16 4 O -0.44 -8.24 13.68 -11.47 -0.16 -8.39 16 5 C 0.27 5.34 2.81 -70.23 -0.20 5.14 16 6 H 0.08 1.56 7.90 -51.93 -0.41 1.15 16 7 N -0.70 -17.43 4.63 -55.68 -0.26 -17.69 16 8 C -0.24 -6.65 9.92 -15.06 -0.15 -6.80 16 9 H 0.07 1.90 7.83 -52.48 -0.41 1.49 16 10 C -0.01 -0.17 5.50 -17.44 -0.10 -0.27 16 11 N -0.93 -27.76 13.06 55.49 0.72 -27.04 16 12 Si 0.91 22.43 29.55 -169.99 -5.02 17.41 16 13 H -0.28 -6.71 7.11 56.52 0.40 -6.31 16 14 H -0.29 -7.19 7.11 56.52 0.40 -6.78 16 15 H -0.29 -7.30 7.11 56.52 0.40 -6.90 16 16 C -0.07 -1.21 4.94 -104.62 -0.52 -1.73 16 17 C -0.09 -1.70 9.05 -39.58 -0.36 -2.06 16 18 C -0.12 -1.86 10.05 -39.59 -0.40 -2.25 16 19 C -0.13 -1.75 10.05 -39.58 -0.40 -2.14 16 20 C -0.13 -1.68 10.05 -39.58 -0.40 -2.07 16 21 C -0.11 -1.69 9.67 -39.58 -0.38 -2.07 16 22 H 0.07 1.03 8.14 -51.93 -0.42 0.60 16 23 H 0.07 1.11 7.33 -51.93 -0.38 0.73 16 24 H 0.07 0.95 8.08 -51.93 -0.42 0.53 16 25 H 0.39 5.69 9.28 45.56 0.42 6.11 16 26 H 0.39 10.35 6.08 -40.82 -0.25 10.10 16 27 H 0.26 7.41 8.31 -40.82 -0.34 7.07 16 28 H 0.13 2.52 6.93 -52.48 -0.36 2.15 16 29 H 0.12 1.53 8.06 -52.49 -0.42 1.10 16 30 H 0.11 1.22 8.06 -52.48 -0.42 0.80 16 31 H 0.12 1.21 8.06 -52.49 -0.42 0.79 16 32 H 0.12 1.52 8.04 -52.49 -0.42 1.10 16 LS Contribution 283.90 15.07 4.28 4.28 Total: -1.00 -32.15 283.90 -6.12 -38.27 By element: Atomic # 1 Polarization: 16.80 SS G_CDS: -3.06 Total: 13.74 kcal Atomic # 6 Polarization: -11.64 SS G_CDS: -3.04 Total: -14.67 kcal Atomic # 7 Polarization: -51.51 SS G_CDS: 0.88 Total: -50.63 kcal Atomic # 8 Polarization: -8.24 SS G_CDS: -0.16 Total: -8.39 kcal Atomic # 14 Polarization: 22.43 SS G_CDS: -5.02 Total: 17.41 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -32.15 -6.12 -38.27 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000394719110.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 84.473 kcal (2) G-P(sol) polarization free energy of solvation -32.151 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.322 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.121 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.271 kcal (6) G-S(sol) free energy of system = (1) + (5) 46.201 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds