Wall clock time and date at job start Mon Mar 30 2020 02:57:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13606 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 N 1.46493 * 109.47498 * 295.16326 * 3 2 1 5 5 C 1.37097 * 120.00148 * 263.84405 * 4 3 2 6 6 H 1.07995 * 120.00316 * 201.55731 * 5 4 3 7 7 C 1.38959 * 119.99846 * 21.56324 * 5 4 3 8 8 N 1.31406 * 119.99696 * 11.20171 * 7 5 4 9 9 Si 1.86802 * 119.99680 * 191.20907 * 7 5 4 10 10 H 1.48496 * 109.47208 * 89.99829 * 9 7 5 11 11 H 1.48501 * 109.46707 * 209.99718 * 9 7 5 12 12 H 1.48495 * 109.47232 * 329.99507 * 9 7 5 13 13 C 1.34769 * 119.99970 * 83.83910 * 4 3 2 14 14 O 1.21295 * 120.00437 * 184.85942 * 13 4 3 15 15 C 1.50704 * 120.00263 * 4.86648 * 13 4 3 16 16 H 1.09001 * 110.66804 * 328.87179 * 15 13 4 17 17 C 1.54895 * 110.91395 * 92.21247 * 15 13 4 18 18 C 1.54263 * 104.19406 * 156.33376 * 17 15 13 19 19 H 1.09007 * 117.41145 * 116.36717 * 18 17 15 20 20 C 1.55467 * 118.30248 * 272.80327 * 18 17 15 21 21 C 1.52999 * 59.83943 * 93.29364 * 20 18 17 22 22 H 1.09006 * 119.29680 * 111.70958 * 21 20 18 23 23 C 1.54261 * 118.20196 * 265.85191 * 21 20 18 24 24 H 1.09004 * 109.46367 * 175.16122 * 3 2 1 25 25 H 1.08997 * 109.47101 * 55.17079 * 3 2 1 26 26 H 0.97006 * 119.99944 * 180.02562 * 8 7 5 27 27 H 1.08999 * 110.48584 * 275.01219 * 17 15 13 28 28 H 1.08994 * 110.48628 * 37.65691 * 17 15 13 29 29 H 1.09003 * 118.06425 * 346.16135 * 20 18 17 30 30 H 1.09005 * 117.18522 * 200.82095 * 20 18 17 31 31 H 1.09001 * 110.48542 * 330.32441 * 23 21 20 32 32 H 1.08996 * 110.49063 * 207.68295 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.6081 0.0007 0.0000 4 7 3.0967 -0.5864 1.2500 5 6 3.4450 0.2254 2.2985 6 1 4.1117 -0.1394 3.0657 7 6 2.9399 1.5178 2.3741 8 7 1.9661 1.8904 1.5743 9 14 3.6454 2.7253 3.6125 10 1 4.7723 3.4680 2.9930 11 1 2.5891 3.6835 4.0265 12 1 4.1356 1.9844 4.8024 13 6 3.2039 -1.9245 1.3694 14 8 3.5238 -2.4150 2.4317 15 6 2.9264 -2.8115 0.1831 16 1 2.1750 -2.3619 -0.4660 17 6 4.2276 -3.1048 -0.6044 18 6 3.9322 -4.4255 -1.3447 19 1 3.9213 -4.3985 -2.4344 20 6 4.2155 -5.7639 -0.6060 21 6 2.8216 -5.1355 -0.5508 22 1 1.9925 -5.6315 -1.0556 23 6 2.4808 -4.2214 0.6442 24 1 2.9708 1.0249 -0.0867 25 1 2.9717 -0.5861 -0.8435 26 1 1.6137 2.7926 1.6268 27 1 4.4307 -2.3053 -1.3168 28 1 5.0672 -3.2302 0.0793 29 1 4.8180 -5.7310 0.3018 30 1 4.3412 -6.6551 -1.2209 31 1 3.0384 -4.5272 1.5295 32 1 1.4093 -4.2369 0.8429 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000597028924.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:57:23 Heat of formation + Delta-G solvation = 25.417493 kcal Electronic energy + Delta-G solvation = -16538.211274 eV Core-core repulsion = 13886.026637 eV Total energy + Delta-G solvation = -2652.184637 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 234.111 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -39.76783 -37.90933 -35.71981 -34.29755 -32.06164 -31.04169 -27.97008 -27.43672 -25.25808 -22.92783 -20.70998 -19.46724 -18.61025 -17.84615 -16.66317 -16.22789 -15.91582 -14.78439 -14.19971 -13.80980 -13.31296 -13.02200 -12.92558 -12.72825 -12.47732 -11.99401 -11.57226 -11.39889 -11.18767 -11.14254 -10.94942 -10.77352 -10.68149 -10.52398 -10.38038 -10.31228 -9.81745 -9.46903 -9.23861 -8.51227 -8.01972 -6.46165 -4.04108 3.10253 3.21875 3.26146 3.47725 3.73905 3.89959 4.05332 4.12904 4.57905 4.87227 4.91988 4.99918 5.06269 5.25130 5.36724 5.49432 5.65803 5.69360 5.76084 5.89488 5.99145 6.07341 6.09747 6.25785 6.34737 6.42374 6.49285 6.62128 6.71824 7.45842 7.93629 8.30178 8.78237 9.01548 9.20519 9.75726 10.58784 Molecular weight = 234.11amu Principal moments of inertia in cm(-1) A = 0.034895 B = 0.007837 C = 0.006994 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 802.220491 B = 3571.901607 C = 4002.506733 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.478 5.478 2 C 0.250 3.750 3 C 0.222 3.778 4 N -0.446 5.446 5 C -0.307 4.307 6 H 0.106 0.894 7 C 0.029 3.971 8 N -0.888 5.888 9 Si 0.933 3.067 10 H -0.276 1.276 11 H -0.284 1.284 12 H -0.269 1.269 13 C 0.467 3.533 14 O -0.571 6.571 15 C -0.110 4.110 16 H 0.085 0.915 17 C -0.080 4.080 18 C -0.167 4.167 19 H 0.109 0.891 20 C -0.156 4.156 21 C -0.162 4.162 22 H 0.105 0.895 23 C -0.079 4.079 24 H 0.132 0.868 25 H 0.080 0.920 26 H 0.273 0.727 27 H 0.073 0.927 28 H 0.074 0.926 29 H 0.094 0.906 30 H 0.093 0.907 31 H 0.084 0.916 32 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.976 -6.933 -7.490 11.355 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.159 5.159 2 C -0.068 4.068 3 C 0.095 3.905 4 N -0.166 5.166 5 C -0.434 4.434 6 H 0.123 0.877 7 C -0.173 4.173 8 N -0.528 5.528 9 Si 0.759 3.241 10 H -0.202 1.202 11 H -0.210 1.210 12 H -0.194 1.194 13 C 0.255 3.745 14 O -0.454 6.454 15 C -0.131 4.131 16 H 0.103 0.897 17 C -0.117 4.117 18 C -0.185 4.185 19 H 0.127 0.873 20 C -0.193 4.193 21 C -0.181 4.181 22 H 0.123 0.877 23 C -0.117 4.117 24 H 0.150 0.850 25 H 0.098 0.902 26 H 0.084 0.916 27 H 0.092 0.908 28 H 0.092 0.908 29 H 0.112 0.888 30 H 0.111 0.889 31 H 0.103 0.897 32 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges 3.354 -6.963 -6.955 10.397 hybrid contribution 0.419 0.879 0.500 1.095 sum 3.773 -6.084 -6.455 9.639 Atomic orbital electron populations 1.80889 1.13662 1.11472 1.09842 1.29334 0.95402 0.90650 0.91447 1.18774 0.81497 1.02896 0.87368 1.43603 1.56789 1.04114 1.12073 1.19753 1.26382 0.93435 1.03812 0.87676 1.25336 0.95024 0.98715 0.98240 1.69730 1.23847 1.20171 1.39085 0.85806 0.78305 0.79579 0.80364 1.20172 1.21015 1.19390 1.20024 0.82891 0.82390 0.89193 1.90526 1.51811 1.73653 1.29391 1.22401 0.98236 0.96130 0.96362 0.89694 1.21846 0.96933 0.95068 0.97901 1.23619 1.05194 0.91887 0.97835 0.87259 1.23424 0.98509 0.95246 1.02153 1.23262 0.92181 1.02534 1.00074 0.87696 1.21810 1.01279 0.91625 0.96950 0.85017 0.90227 0.91616 0.90808 0.90752 0.88769 0.88859 0.89747 0.91571 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.48 -11.57 18.54 42.16 0.78 -10.79 16 2 C 0.25 5.62 12.85 -20.76 -0.27 5.35 16 3 C 0.22 4.46 4.78 -6.83 -0.03 4.43 16 4 N -0.45 -10.45 2.60 -117.94 -0.31 -10.76 16 5 C -0.31 -7.92 9.29 -14.93 -0.14 -8.05 16 6 H 0.11 2.85 7.44 -52.49 -0.39 2.46 16 7 C 0.03 0.73 5.09 -17.47 -0.09 0.64 16 8 N -0.89 -22.48 9.07 55.50 0.50 -21.98 16 9 Si 0.93 19.90 29.57 -169.99 -5.03 14.87 16 10 H -0.28 -5.68 7.11 56.52 0.40 -5.28 16 11 H -0.28 -6.16 7.11 56.52 0.40 -5.76 16 12 H -0.27 -5.84 7.11 56.52 0.40 -5.44 16 13 C 0.47 10.61 6.73 -10.99 -0.07 10.53 16 14 O -0.57 -15.01 15.57 5.54 0.09 -14.93 16 15 C -0.11 -1.93 2.33 -89.78 -0.21 -2.14 16 16 H 0.08 1.45 6.12 -51.93 -0.32 1.13 16 17 C -0.08 -1.16 6.01 -25.07 -0.15 -1.31 16 18 C -0.17 -2.09 7.04 -88.19 -0.62 -2.71 16 19 H 0.11 1.17 8.14 -51.92 -0.42 0.75 16 20 C -0.16 -1.86 10.21 -25.42 -0.26 -2.12 16 21 C -0.16 -2.16 6.85 -89.51 -0.61 -2.77 16 22 H 0.10 1.24 8.14 -51.93 -0.42 0.82 16 23 C -0.08 -1.31 5.93 -25.08 -0.15 -1.46 16 24 H 0.13 2.72 6.39 -51.93 -0.33 2.39 16 25 H 0.08 1.25 6.32 -51.93 -0.33 0.92 16 26 H 0.27 6.73 8.31 -40.82 -0.34 6.39 16 27 H 0.07 0.94 7.81 -51.93 -0.41 0.53 16 28 H 0.07 1.17 8.05 -51.93 -0.42 0.76 16 29 H 0.09 1.18 8.14 -51.93 -0.42 0.76 16 30 H 0.09 0.91 8.14 -51.93 -0.42 0.49 16 31 H 0.08 1.55 7.24 -51.93 -0.38 1.17 16 32 H 0.07 1.10 8.14 -51.93 -0.42 0.67 16 LS Contribution 272.15 15.07 4.10 4.10 Total: -1.00 -30.04 272.15 -6.28 -36.32 By element: Atomic # 1 Polarization: 6.58 SS G_CDS: -3.82 Total: 2.77 kcal Atomic # 6 Polarization: 3.00 SS G_CDS: -2.60 Total: 0.39 kcal Atomic # 7 Polarization: -44.50 SS G_CDS: 0.98 Total: -43.53 kcal Atomic # 8 Polarization: -15.01 SS G_CDS: 0.09 Total: -14.93 kcal Atomic # 14 Polarization: 19.90 SS G_CDS: -5.03 Total: 14.87 kcal Total LS contribution 4.10 Total: 4.10 kcal Total: -30.04 -6.28 -36.32 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000597028924.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.737 kcal (2) G-P(sol) polarization free energy of solvation -30.040 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.697 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.279 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.319 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.417 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds