Wall clock time and date at job start Mon Mar 30 2020 03:42:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31002 * 1 3 3 C 1.50694 * 120.00368 * 2 1 4 4 N 1.46502 * 109.47692 * 124.99398 * 3 2 1 5 5 C 1.38620 * 120.00491 * 179.97438 * 4 3 2 6 6 C 1.39237 * 120.48390 * 0.02562 * 5 4 3 7 7 C 1.39194 * 118.25090 * 179.97438 * 6 5 4 8 8 N 1.38598 * 120.49103 * 179.97438 * 7 6 5 9 9 C 1.46503 * 119.99833 * 185.00026 * 8 7 6 10 10 C 1.36939 * 120.00195 * 5.00437 * 8 7 6 11 11 H 1.08000 * 119.99955 * 335.20381 * 10 8 7 12 12 C 1.38843 * 120.00160 * 155.20500 * 10 8 7 13 13 N 1.31543 * 119.99985 * 348.42442 * 12 10 8 14 14 Si 1.86797 * 119.99960 * 168.69778 * 12 10 8 15 15 H 1.48498 * 109.46989 * 90.00271 * 14 12 10 16 16 H 1.48496 * 109.47136 * 210.00084 * 14 12 10 17 17 H 1.48501 * 109.47380 * 330.00181 * 14 12 10 18 18 N 1.33263 * 119.01294 * 0.25171 * 7 6 5 19 19 C 1.31684 * 120.88416 * 359.48420 * 18 7 6 20 20 N 1.31789 * 121.93046 * 0.53127 * 19 18 7 21 21 H 1.07997 * 120.00113 * 179.97438 * 1 2 3 22 22 H 1.07996 * 119.99704 * 0.02562 * 1 2 3 23 23 H 1.08004 * 119.99890 * 179.97438 * 2 1 3 24 24 H 1.08999 * 109.46950 * 4.99624 * 3 2 1 25 25 H 1.08997 * 109.47206 * 244.99870 * 3 2 1 26 26 H 0.97007 * 119.99625 * 0.02562 * 4 3 2 27 27 H 1.07998 * 120.87787 * 359.97438 * 6 5 4 28 28 H 1.09005 * 109.47066 * 270.72095 * 9 8 7 29 29 H 1.08997 * 109.47051 * 30.71738 * 9 8 7 30 30 H 1.08997 * 109.46785 * 150.71999 * 9 8 7 31 31 H 0.96995 * 119.99990 * 180.02562 * 13 12 10 32 32 H 1.07993 * 119.03265 * 180.26636 * 19 18 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0636 1.3050 0.0000 4 7 2.9938 1.3319 1.1315 5 6 3.8015 2.4393 1.3387 6 6 3.7366 3.5319 0.4780 7 6 4.5681 4.6193 0.7298 8 7 4.5421 5.7310 -0.0974 9 6 5.4970 6.8222 0.1116 10 6 3.6237 5.8095 -1.1102 11 1 3.2043 4.9071 -1.5300 12 6 3.2316 7.0492 -1.5972 13 7 3.5592 8.1448 -0.9472 14 14 2.2324 7.1606 -3.1716 15 1 0.7849 7.1088 -2.8438 16 1 2.5380 8.4391 -3.8624 17 1 2.5797 6.0226 -4.0600 18 7 5.3936 4.5733 1.7750 19 6 5.4214 3.5229 2.5687 20 7 4.6502 2.4740 2.3639 21 1 -0.5400 -0.9353 -0.0004 22 1 -0.5399 0.9353 -0.0004 23 1 1.8500 -0.9354 0.0004 24 1 1.3587 2.1316 0.0895 25 1 2.6214 1.4025 -0.9313 26 1 3.0450 0.5744 1.7353 27 1 3.0589 3.5355 -0.3629 28 1 5.0757 7.5449 0.8105 29 1 6.4243 6.4202 0.5198 30 1 5.7015 7.3133 -0.8397 31 1 3.2849 9.0108 -1.2873 32 1 6.0990 3.5192 3.4096 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000258738493.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:42:12 Heat of formation + Delta-G solvation = 87.738075 kcal Electronic energy + Delta-G solvation = -15983.757085 eV Core-core repulsion = 13366.567622 eV Total energy + Delta-G solvation = -2617.189463 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 234.118 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -39.61301 -36.78290 -35.96581 -33.34679 -32.22072 -30.37410 -29.27117 -26.61052 -25.52602 -24.31367 -22.42557 -20.71744 -20.01935 -17.95485 -16.69332 -16.49290 -15.46410 -14.97236 -14.47339 -14.16507 -14.04070 -13.84343 -13.30447 -13.20283 -12.80001 -12.67914 -12.27492 -11.52224 -11.25666 -11.11883 -10.84911 -10.60341 -10.45828 -10.35906 -9.68905 -9.51516 -9.23503 -8.86601 -7.98990 -7.46567 -7.01805 -6.45620 -3.94529 2.06116 2.43256 2.74730 3.12299 3.13331 3.16733 3.82583 3.96098 4.75659 4.79650 4.84169 5.06441 5.28349 5.40308 5.61893 5.78215 5.79066 6.02280 6.24125 6.45871 6.60863 6.66992 6.71617 6.81044 6.95790 7.16854 7.30228 7.32808 7.60009 7.94459 8.17191 8.35634 8.67592 9.19327 9.34561 9.77832 10.53704 Molecular weight = 234.12amu Principal moments of inertia in cm(-1) A = 0.018863 B = 0.008693 C = 0.006081 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1484.012617 B = 3220.028144 C = 4603.517554 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.167 4.167 3 C 0.158 3.842 4 N -0.726 5.726 5 C 0.443 3.557 6 C -0.367 4.367 7 C 0.406 3.594 8 N -0.411 5.411 9 C 0.130 3.870 10 C -0.311 4.311 11 H 0.097 0.903 12 C 0.033 3.967 13 N -0.866 5.866 14 Si 0.929 3.071 15 H -0.275 1.275 16 H -0.280 1.280 17 H -0.268 1.268 18 N -0.623 5.623 19 C 0.357 3.643 20 N -0.654 5.654 21 H 0.100 0.900 22 H 0.100 0.900 23 H 0.112 0.888 24 H 0.066 0.934 25 H 0.069 0.931 26 H 0.397 0.603 27 H 0.124 0.876 28 H 0.052 0.948 29 H 0.039 0.961 30 H 0.062 0.938 31 H 0.271 0.729 32 H 0.174 0.826 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.029 -9.478 -0.085 9.950 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.185 4.185 3 C 0.034 3.966 4 N -0.360 5.360 5 C 0.207 3.793 6 C -0.403 4.403 7 C 0.162 3.838 8 N -0.100 5.100 9 C -0.013 4.013 10 C -0.440 4.440 11 H 0.115 0.885 12 C -0.173 4.173 13 N -0.502 5.502 14 Si 0.755 3.245 15 H -0.201 1.201 16 H -0.205 1.205 17 H -0.192 1.192 18 N -0.355 5.355 19 C 0.063 3.937 20 N -0.389 5.389 21 H 0.118 0.882 22 H 0.119 0.881 23 H 0.130 0.870 24 H 0.084 0.916 25 H 0.087 0.913 26 H 0.232 0.768 27 H 0.142 0.858 28 H 0.071 0.929 29 H 0.058 0.942 30 H 0.081 0.919 31 H 0.082 0.918 32 H 0.191 0.809 Dipole moment (debyes) X Y Z Total from point charges -2.596 -8.867 0.173 9.241 hybrid contribution -1.102 -0.077 -1.211 1.640 sum -3.698 -8.944 -1.038 9.734 Atomic orbital electron populations 1.23934 0.95812 1.02192 0.99241 1.23023 0.96133 0.98320 1.01033 1.20337 0.91454 0.95034 0.89778 1.44057 1.42336 1.18151 1.31494 1.18030 0.86728 0.85699 0.88804 1.20911 1.13851 0.96888 1.08632 1.18276 0.89799 0.88697 0.87055 1.42429 1.28863 1.14060 1.24656 1.21331 0.89881 0.88849 1.01267 1.19597 1.20086 0.93895 1.10456 0.88522 1.25432 0.97435 0.94957 0.99467 1.70087 1.44323 0.98315 1.37453 0.85882 0.79624 0.78151 0.80828 1.20077 1.20529 1.19220 1.67824 1.29130 1.29882 1.08654 1.23825 0.92018 0.82966 0.94891 1.67708 1.15140 1.31480 1.24545 0.88205 0.88123 0.86972 0.91597 0.91313 0.76811 0.85766 0.92900 0.94216 0.91893 0.91843 0.80930 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.70 14.32 29.01 0.42 -1.29 16 2 C -0.17 -1.83 9.63 -36.03 -0.35 -2.17 16 3 C 0.16 2.24 5.36 -5.20 -0.03 2.21 16 4 N -0.73 -12.00 5.71 -61.50 -0.35 -12.35 16 5 C 0.44 9.23 7.70 -154.71 -1.19 8.04 16 6 C -0.37 -8.47 8.60 -38.86 -0.33 -8.81 16 7 C 0.41 10.22 7.34 -154.65 -1.14 9.08 16 8 N -0.41 -10.75 3.11 -122.29 -0.38 -11.13 16 9 C 0.13 3.21 8.68 59.85 0.52 3.73 16 10 C -0.31 -8.13 9.07 -15.05 -0.14 -8.27 16 11 H 0.10 2.43 6.14 -52.49 -0.32 2.11 16 12 C 0.03 0.84 5.08 -17.45 -0.09 0.75 16 13 N -0.87 -22.84 10.78 55.49 0.60 -22.24 16 14 Si 0.93 19.47 29.57 -169.99 -5.03 14.44 16 15 H -0.28 -5.73 7.11 56.52 0.40 -5.33 16 16 H -0.28 -5.81 7.11 56.52 0.40 -5.41 16 17 H -0.27 -5.48 7.11 56.52 0.40 -5.07 16 18 N -0.62 -14.75 9.32 -13.87 -0.13 -14.88 16 19 C 0.36 7.41 12.28 -92.25 -1.13 6.28 16 20 N -0.65 -13.74 10.47 -13.87 -0.15 -13.88 16 21 H 0.10 0.79 8.06 -52.49 -0.42 0.37 16 22 H 0.10 0.99 7.84 -52.49 -0.41 0.58 16 23 H 0.11 1.08 8.06 -52.48 -0.42 0.66 16 24 H 0.07 0.99 7.62 -51.93 -0.40 0.59 16 25 H 0.07 1.00 7.97 -51.93 -0.41 0.59 16 26 H 0.40 5.89 8.59 -40.82 -0.35 5.54 16 27 H 0.12 2.81 5.04 -52.49 -0.26 2.54 16 28 H 0.05 1.37 7.64 -51.93 -0.40 0.97 16 29 H 0.04 0.91 7.50 -51.93 -0.39 0.52 16 30 H 0.06 1.56 7.03 -51.93 -0.37 1.20 16 31 H 0.27 6.72 8.31 -40.82 -0.34 6.38 16 32 H 0.17 2.87 8.06 -52.49 -0.42 2.45 16 LS Contribution 276.20 15.07 4.16 4.16 Total: -1.00 -29.20 276.20 -8.44 -37.65 By element: Atomic # 1 Polarization: 12.40 SS G_CDS: -3.71 Total: 8.68 kcal Atomic # 6 Polarization: 13.02 SS G_CDS: -3.46 Total: 9.56 kcal Atomic # 7 Polarization: -74.08 SS G_CDS: -0.41 Total: -74.49 kcal Atomic # 14 Polarization: 19.47 SS G_CDS: -5.03 Total: 14.44 kcal Total LS contribution 4.16 Total: 4.16 kcal Total: -29.20 -8.44 -37.65 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000258738493.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 125.384 kcal (2) G-P(sol) polarization free energy of solvation -29.202 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 96.182 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.444 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.646 kcal (6) G-S(sol) free energy of system = (1) + (5) 87.738 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds