Wall clock time and date at job start Mon Mar 30 2020 03:19:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 N 1.32394 * 120.51473 * 2 1 4 4 C 1.32524 * 120.75650 * 179.72183 * 3 2 1 5 5 N 1.38436 * 119.15375 * 179.97438 * 4 3 2 6 6 C 1.36988 * 120.00158 * 359.97438 * 5 4 3 7 7 H 1.08003 * 119.99528 * 0.02562 * 6 5 4 8 8 C 1.38836 * 119.99922 * 180.02562 * 6 5 4 9 9 N 1.31544 * 119.99644 * 180.02562 * 8 6 5 10 10 Si 1.86791 * 120.00176 * 359.97438 * 8 6 5 11 11 H 1.48508 * 109.47111 * 90.00123 * 10 8 6 12 12 H 1.48497 * 109.47249 * 210.00131 * 10 8 6 13 13 H 1.48500 * 109.47276 * 330.00508 * 10 8 6 14 14 N 1.32647 * 121.68904 * 359.97438 * 4 3 2 15 15 C 1.32001 * 120.56086 * 0.02562 * 14 4 3 16 16 C 1.38288 * 120.51671 * 179.71980 * 2 1 3 17 17 C 1.50898 * 132.83160 * 0.26849 * 16 2 1 18 18 N 1.48114 * 105.66957 * 162.66290 * 17 16 2 19 19 C 1.46893 * 111.00366 * 268.01783 * 18 17 16 20 20 C 1.48103 * 103.95389 * 27.42183 * 18 17 16 21 21 H 1.08998 * 109.47163 * 89.99980 * 1 2 3 22 22 H 1.09004 * 109.47028 * 210.00346 * 1 2 3 23 23 H 1.09006 * 109.47177 * 329.99821 * 1 2 3 24 24 H 0.96997 * 120.00264 * 180.02562 * 5 4 3 25 25 H 0.97001 * 120.00215 * 180.02562 * 9 8 6 26 26 H 1.09003 * 110.21035 * 43.61195 * 17 16 2 27 27 H 1.09003 * 110.27280 * 281.75415 * 17 16 2 28 28 H 1.08996 * 109.47377 * 174.96368 * 19 18 17 29 29 H 1.08994 * 109.47519 * 294.97134 * 19 18 17 30 30 H 1.09012 * 109.46819 * 54.96695 * 19 18 17 31 31 H 1.09005 * 110.19959 * 213.48469 * 20 18 17 32 32 H 1.09002 * 110.26676 * 91.65002 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 7 2.1792 1.1406 0.0000 4 6 3.5044 1.1462 0.0055 5 7 4.1737 2.3580 0.0048 6 6 3.4664 3.5311 -0.0021 7 1 2.3866 3.5106 -0.0066 8 6 4.1377 4.7464 -0.0034 9 7 3.4584 5.8729 -0.0095 10 14 6.0052 4.7819 0.0051 11 1 6.5066 4.7863 -1.3928 12 1 6.4740 6.0060 0.7029 13 1 6.5200 3.5815 0.7116 14 7 4.2060 0.0204 0.0117 15 6 3.5963 -1.1504 0.0121 16 6 2.2092 -1.1913 0.0058 17 6 1.7768 -2.6370 0.0077 18 7 2.9681 -3.4114 -0.4105 19 6 2.9807 -3.6132 -1.8655 20 6 4.1093 -2.5707 0.0187 21 1 -0.3633 0.0000 -1.0276 22 1 -0.3633 -0.8900 0.5139 23 1 -0.3634 0.8900 0.5139 24 1 5.1435 2.3765 0.0084 25 1 3.9274 6.7220 -0.0108 26 1 0.9622 -2.7874 -0.7008 27 1 1.4649 -2.9367 1.0083 28 1 3.9087 -4.1057 -2.1559 29 1 2.1335 -4.2355 -2.1534 30 1 2.9094 -2.6478 -2.3668 31 1 4.9380 -2.6749 -0.6817 32 1 4.4282 -2.8510 1.0226 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260365734.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:19:58 Heat of formation + Delta-G solvation = 74.163261 kcal Electronic energy + Delta-G solvation = -16204.479145 eV Core-core repulsion = 13586.701034 eV Total energy + Delta-G solvation = -2617.778111 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 234.118 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -40.61908 -37.87570 -35.34824 -33.52252 -32.19416 -30.50082 -28.49758 -27.96334 -26.12740 -24.40209 -22.19731 -21.07865 -20.47996 -18.52348 -16.73383 -16.52806 -15.51981 -14.87503 -14.77718 -14.23347 -14.07931 -13.35740 -13.13716 -13.09536 -12.69319 -12.31418 -12.25913 -12.02276 -11.92219 -11.64307 -11.49041 -11.35879 -10.73943 -10.31052 -10.24435 -9.92049 -9.49479 -8.91733 -8.62145 -8.07523 -7.44201 -6.57234 -3.88700 1.96151 2.07887 2.99611 3.00853 3.05427 3.89844 3.97359 4.14166 4.51127 4.66011 5.07956 5.12151 5.22191 5.29526 5.46542 5.52403 5.68531 5.78681 5.87730 5.89400 5.97722 6.04738 6.08103 6.22034 6.39207 6.57570 6.78762 7.03264 7.13754 7.38006 7.80875 8.19836 8.42540 8.76151 9.12552 9.57139 10.52945 Molecular weight = 234.12amu Principal moments of inertia in cm(-1) A = 0.037581 B = 0.006912 C = 0.006047 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 744.877911 B = 4049.830884 C = 4629.505608 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C 0.244 3.756 3 N -0.559 5.559 4 C 0.511 3.489 5 N -0.528 5.528 6 C -0.285 4.285 7 H 0.133 0.867 8 C 0.042 3.958 9 N -0.862 5.862 10 Si 0.878 3.122 11 H -0.267 1.267 12 H -0.271 1.271 13 H -0.265 1.265 14 N -0.589 5.589 15 C 0.188 3.812 16 C -0.375 4.375 17 C 0.112 3.888 18 N -0.505 5.505 19 C 0.012 3.988 20 C 0.091 3.909 21 H 0.074 0.926 22 H 0.070 0.930 23 H 0.076 0.924 24 H 0.390 0.610 25 H 0.279 0.721 26 H 0.067 0.933 27 H 0.081 0.919 28 H 0.068 0.932 29 H 0.070 0.930 30 H 0.031 0.969 31 H 0.084 0.916 32 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.300 -14.010 -1.174 14.119 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.091 3.909 3 N -0.285 5.285 4 C 0.157 3.843 5 N -0.141 5.141 6 C -0.415 4.415 7 H 0.150 0.850 8 C -0.164 4.164 9 N -0.498 5.498 10 Si 0.704 3.296 11 H -0.192 1.192 12 H -0.196 1.196 13 H -0.190 1.190 14 N -0.315 5.315 15 C 0.033 3.967 16 C -0.389 4.389 17 C -0.017 4.017 18 N -0.226 5.226 19 C -0.137 4.137 20 C -0.038 4.038 21 H 0.093 0.907 22 H 0.089 0.911 23 H 0.095 0.905 24 H 0.227 0.773 25 H 0.090 0.910 26 H 0.085 0.915 27 H 0.099 0.901 28 H 0.086 0.914 29 H 0.089 0.911 30 H 0.050 0.950 31 H 0.102 0.898 32 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -0.769 -12.988 -0.953 13.046 hybrid contribution 0.972 0.436 -0.418 1.144 sum 0.203 -12.552 -1.371 12.629 Atomic orbital electron populations 1.20650 0.89574 1.02909 1.02579 1.20540 0.95901 0.86538 0.87926 1.67883 1.07591 1.28356 1.24628 1.18754 0.85101 0.85170 0.95278 1.40754 1.07200 1.01937 1.64254 1.19681 0.95192 0.80368 1.46274 0.84960 1.25058 0.99122 0.94888 0.97318 1.69659 1.36245 0.97556 1.46359 0.86634 0.84578 0.78980 0.79443 1.19181 1.19592 1.18996 1.66821 1.41281 0.97010 1.26347 1.21951 0.91633 0.93463 0.89700 1.21387 0.96790 0.96654 1.24072 1.21098 0.92523 0.87174 1.00878 1.65349 1.02681 1.40736 1.13854 1.22589 1.02478 1.00490 0.88146 1.21573 0.94292 0.85110 1.02839 0.90719 0.91094 0.90522 0.77347 0.91038 0.91473 0.90078 0.91368 0.91140 0.94996 0.89793 0.87904 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.49 10.14 36.00 0.37 -1.13 16 2 C 0.24 4.84 6.82 -82.33 -0.56 4.27 16 3 N -0.56 -13.44 9.04 -10.16 -0.09 -13.53 16 4 C 0.51 12.64 8.38 -322.53 -2.70 9.93 16 5 N -0.53 -13.39 5.23 -12.76 -0.07 -13.45 16 6 C -0.28 -7.83 10.17 -15.03 -0.15 -7.99 16 7 H 0.13 3.98 7.27 -52.48 -0.38 3.60 16 8 C 0.04 1.13 5.50 -17.45 -0.10 1.03 16 9 N -0.86 -24.11 13.96 55.49 0.77 -23.34 16 10 Si 0.88 19.46 27.73 -169.99 -4.71 14.75 16 11 H -0.27 -5.82 7.11 56.52 0.40 -5.42 16 12 H -0.27 -5.90 7.11 56.52 0.40 -5.50 16 13 H -0.26 -5.65 6.52 56.52 0.37 -5.28 16 14 N -0.59 -13.34 10.46 -10.02 -0.10 -13.44 16 15 C 0.19 3.63 7.44 -82.17 -0.61 3.02 16 16 C -0.37 -6.79 6.01 -104.31 -0.63 -7.41 16 17 C 0.11 1.56 6.28 -4.21 -0.03 1.54 16 18 N -0.50 -6.77 5.78 -243.38 -1.41 -8.18 16 19 C 0.01 0.14 9.16 60.06 0.55 0.69 16 20 C 0.09 1.34 6.65 -4.16 -0.03 1.32 16 21 H 0.07 1.02 8.14 -51.93 -0.42 0.59 16 22 H 0.07 0.86 7.86 -51.93 -0.41 0.45 16 23 H 0.08 1.18 8.14 -51.93 -0.42 0.76 16 24 H 0.39 9.29 5.87 -40.82 -0.24 9.05 16 25 H 0.28 7.19 8.31 -40.82 -0.34 6.85 16 26 H 0.07 0.83 7.80 -51.93 -0.41 0.43 16 27 H 0.08 1.06 8.14 -51.93 -0.42 0.63 16 28 H 0.07 0.70 8.08 -51.93 -0.42 0.28 16 29 H 0.07 0.70 8.14 -51.93 -0.42 0.28 16 30 H 0.03 0.43 8.07 -51.92 -0.42 0.01 16 31 H 0.08 1.14 7.76 -51.93 -0.40 0.74 16 32 H 0.10 1.39 8.14 -51.93 -0.42 0.97 16 LS Contribution 271.24 15.07 4.09 4.09 Total: -1.00 -30.04 271.24 -9.37 -39.41 By element: Atomic # 1 Polarization: 12.39 SS G_CDS: -3.96 Total: 8.43 kcal Atomic # 6 Polarization: 9.17 SS G_CDS: -3.89 Total: 5.28 kcal Atomic # 7 Polarization: -71.06 SS G_CDS: -0.90 Total: -71.95 kcal Atomic # 14 Polarization: 19.46 SS G_CDS: -4.71 Total: 14.75 kcal Total LS contribution 4.09 Total: 4.09 kcal Total: -30.04 -9.37 -39.41 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260365734.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 113.571 kcal (2) G-P(sol) polarization free energy of solvation -30.038 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 83.533 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.370 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.408 kcal (6) G-S(sol) free energy of system = (1) + (5) 74.163 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds